Protein–RNA interactions for Protein: P39967

UBP9, Ubiquitin carboxyl-terminal hydrolase 9, yeastyeast

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP9P39967 YOL014WYOL014W 375 nt2.23□□□□□ -2.05
UBP9P39967 RPL41BYDL133C-A 78 nt2.21□□□□□ -2.06
UBP9P39967 SBH2YER019C-A 267 nt2.21□□□□□ -2.06
UBP9P39967 CDC25YLR310C 4770 nt2.21□□□□□ -2.06
UBP9P39967 SPP41YDR464W 4308 nt2.18□□□□□ -2.06
UBP9P39967 YNL284C-BYNL284C-B 5268 nt2.16□□□□□ -2.06
UBP9P39967 LAA1YJL207C 6045 nt2.16□□□□□ -2.06
UBP9P39967 NEO1YIL048W 3456 nt2.15□□□□□ -2.06
UBP9P39967 FAB1YFR019W 6837 nt2.15□□□□□ -2.07
UBP9P39967 SEC31YDL195W 3822 nt2.14□□□□□ -2.07
UBP9P39967 YMR272W-BYMR272W-B 108 nt2.12□□□□□ -2.07
UBP9P39967 MLP2YIL149C 5040 nt2.12□□□□□ -2.07
UBP9P39967 TOR2YKL203C 7425 nt2.11□□□□□ -2.07
UBP9P39967 PEP1YBL017C 4740 nt2.11□□□□□ -2.07
UBP9P39967 YPR117WYPR117W 7470 nt2.1□□□□□ -2.07
UBP9P39967 HER1YOR227W 3741 nt2.09□□□□□ -2.07
UBP9P39967 USO1YDL058W 5373 nt2.08□□□□□ -2.08
UBP9P39967 SWI4YER111C 3282 nt2.05□□□□□ -2.08
UBP9P39967 FKS1YLR342W 5631 nt2.04□□□□□ -2.08
UBP9P39967 SSK2YNR031C 4740 nt2.03□□□□□ -2.09
UBP9P39967 SKI3YPR189W 4299 nt2.02□□□□□ -2.09
UBP9P39967 CDC39YCR093W 6327 nt2□□□□□ -2.09
UBP9P39967 SPT7YBR081C 3999 nt2□□□□□ -2.09
UBP9P39967 PMD1YER132C 5262 nt1.99□□□□□ -2.09
UBP9P39967 YMR045CYMR045C 5268 nt1.99□□□□□ -2.09
UBP9P39967 MON2YNL297C 4911 nt1.98□□□□□ -2.09
UBP9P39967 YKL145W-AYKL145W-A 93 nt1.93□□□□□ -2.1
UBP9P39967 NUP145YGL092W 3954 nt1.92□□□□□ -2.1
UBP9P39967 CFT1YDR301W 4074 nt1.92□□□□□ -2.1
UBP9P39967 NUP188YML103C 4968 nt1.92□□□□□ -2.1
UBP9P39967 YOR093CYOR093C 4947 nt1.91□□□□□ -2.1
UBP9P39967 YOR335W-AYOR335W-A 81 nt1.89□□□□□ -2.11
UBP9P39967 snR58snR58 96 nt1.87□□□□□ -2.11
UBP9P39967 YMR247W-AYMR247W-A 144 nt1.84□□□□□ -2.11
UBP9P39967 YHR214C-BYHR214C-B 5382 nt1.82□□□□□ -2.12
UBP9P39967 YOR192C-BYOR192C-B 5313 nt1.81□□□□□ -2.12
UBP9P39967 BUD3YCL014W 4911 nt1.8□□□□□ -2.12
UBP9P39967 snR6snR6 112 nt1.79□□□□□ -2.12
UBP9P39967 TMA7YLR262C-A 195 nt1.79□□□□□ -2.12
UBP9P39967 BRR2YER172C 6492 nt1.78□□□□□ -2.13
UBP9P39967 LTE1YAL024C 4308 nt1.77□□□□□ -2.13
UBP9P39967 DNF3YMR162C 4971 nt1.76□□□□□ -2.13
UBP9P39967 tT(UGU)HtT(UGU)H 72 nt1.75□□□□□ -2.13
UBP9P39967 THO2YNL139C 4794 nt1.69□□□□□ -2.14
UBP9P39967 VPS15YBR097W 4365 nt1.69□□□□□ -2.14
UBP9P39967 YML100W-AYML100W-A 174 nt1.68□□□□□ -2.14
UBP9P39967 YJL113WYJL113W 4647 nt1.65□□□□□ -2.14
UBP9P39967 MEC1YBR136W 7107 nt1.65□□□□□ -2.15
UBP9P39967 snR73snR73 106 nt1.61□□□□□ -2.15
UBP9P39967 ESP1YGR098C 4893 nt1.61□□□□□ -2.15
UBP9P39967 YBL100W-BYBL100W-B 5313 nt1.6□□□□□ -2.15
UBP9P39967 RKR1YMR247C 4689 nt1.58□□□□□ -2.16
UBP9P39967 tH(GUG)E1tH(GUG)E1 72 nt1.53□□□□□ -2.16
UBP9P39967 tH(GUG)E2tH(GUG)E2 72 nt1.53□□□□□ -2.16
UBP9P39967 tH(GUG)G1tH(GUG)G1 72 nt1.53□□□□□ -2.16
UBP9P39967 tH(GUG)G2tH(GUG)G2 72 nt1.53□□□□□ -2.16
UBP9P39967 tH(GUG)HtH(GUG)H 72 nt1.53□□□□□ -2.16
UBP9P39967 tH(GUG)KtH(GUG)K 72 nt1.53□□□□□ -2.16
UBP9P39967 tH(GUG)MtH(GUG)M 72 nt1.53□□□□□ -2.16
UBP9P39967 IRA1YBR140C 9279 nt1.52□□□□□ -2.17
UBP9P39967 tQ(UUG)E2tQ(UUG)E2 72 nt1.51□□□□□ -2.17
UBP9P39967 FIG2YCR089W 4830 nt1.49□□□□□ -2.17
UBP9P39967 CCH1YGR217W 6120 nt1.49□□□□□ -2.17
UBP9P39967 FMP27YLR454W 7887 nt1.45□□□□□ -2.18
UBP9P39967 IQG1YPL242C 4488 nt1.43□□□□□ -2.18
UBP9P39967 IML1YJR138W 4755 nt1.42□□□□□ -2.18
UBP9P39967 PAU9YBL108C-A 129 nt1.42□□□□□ -2.18
UBP9P39967 PAU24YBR301W 363 nt1.4□□□□□ -2.19
UBP9P39967 HKR1YDR420W 5409 nt1.38□□□□□ -2.19
UBP9P39967 tV(UAC)BtV(UAC)B 74 nt1.36□□□□□ -2.19
UBP9P39967 tV(UAC)DtV(UAC)D 74 nt1.36□□□□□ -2.19
UBP9P39967 SCC2YDR180W 4482 nt1.36□□□□□ -2.19
UBP9P39967 YJR029WYJR029W 5268 nt1.35□□□□□ -2.19
UBP9P39967 DOP1YDR141C 5097 nt1.21□□□□□ -2.22
UBP9P39967 snR87snR87 109 nt1.19□□□□□ -2.22
UBP9P39967 BEM2YER155C 6504 nt1.17□□□□□ -2.22
UBP9P39967 YPR137C-BYPR137C-B 5268 nt1.17□□□□□ -2.22
UBP9P39967 YMR272W-AYMR272W-A 114 nt1.13□□□□□ -2.23
UBP9P39967 snR161snR161 161 nt1.1□□□□□ -2.23
UBP9P39967 URB1YKL014C 5295 nt1.09□□□□□ -2.23
UBP9P39967 YOR186C-AYOR186C-A 210 nt1.07□□□□□ -2.24
UBP9P39967 EMT1tM(CAU)D 73 nt0.97□□□□□ -2.25
UBP9P39967 EMT5tM(CAU)J1 73 nt0.97□□□□□ -2.25
UBP9P39967 EMT3tM(CAU)J2 73 nt0.97□□□□□ -2.25
UBP9P39967 EMT4tM(CAU)M 73 nt0.97□□□□□ -2.25
UBP9P39967 EMT2tM(CAU)O2 73 nt0.97□□□□□ -2.25
UBP9P39967 MLP1YKR095W 5628 nt0.96□□□□□ -2.26
UBP9P39967 tF(GAA)BtF(GAA)B 73 nt0.96□□□□□ -2.26
UBP9P39967 tF(GAA)FtF(GAA)F 73 nt0.96□□□□□ -2.26
UBP9P39967 tF(GAA)GtF(GAA)G 73 nt0.96□□□□□ -2.26
UBP9P39967 tF(GAA)H1tF(GAA)H1 73 nt0.96□□□□□ -2.26
UBP9P39967 tF(GAA)H2tF(GAA)H2 73 nt0.96□□□□□ -2.26
UBP9P39967 tF(GAA)MtF(GAA)M 73 nt0.96□□□□□ -2.26
UBP9P39967 tF(GAA)P1tF(GAA)P1 73 nt0.96□□□□□ -2.26
UBP9P39967 tF(GAA)P2tF(GAA)P2 73 nt0.96□□□□□ -2.26
UBP9P39967 tA(UGC)QtA(UGC)Q 76 nt0.93□□□□□ -2.26
UBP9P39967 CDC65tQ(CUG)M 72 nt0.85□□□□□ -2.27
UBP9P39967 UTP20YBL004W 7482 nt0.85□□□□□ -2.27
UBP9P39967 tT(AGU)BtT(AGU)B 73 nt0.84□□□□□ -2.27
UBP9P39967 tT(AGU)CtT(AGU)C 73 nt0.84□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 17.8 ms