Protein–RNA interactions for Protein: P40356

PGD1, Mediator of RNA polymerase II transcription subunit 3, yeastyeast

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PGD1P40356 YEL034C-AYEL034C-A 603 nt7.11□□□□□ -1.27
PGD1P40356 YMR253CYMR253C 1245 nt7.11□□□□□ -1.27
PGD1P40356 SUV3YPL029W 2214 nt7.11□□□□□ -1.27
PGD1P40356 EAF3YPR023C 1206 nt7.1□□□□□ -1.27
PGD1P40356 ADE5,7YGL234W 2409 nt7.1□□□□□ -1.27
PGD1P40356 CSM1YCR086W 573 nt7.09□□□□□ -1.27
PGD1P40356 OYE2YHR179W 1203 nt7.08□□□□□ -1.28
PGD1P40356 MRS4YKR052C 915 nt7.08□□□□□ -1.28
PGD1P40356 YLR279WYLR279W 390 nt7.08□□□□□ -1.28
PGD1P40356 YNR064CYNR064C 873 nt7.08□□□□□ -1.28
PGD1P40356 KEL3YPL263C 1956 nt7.08□□□□□ -1.28
PGD1P40356 TSC10YBR265W 963 nt7.07□□□□□ -1.28
PGD1P40356 YER152CYER152C 1332 nt7.06□□□□□ -1.28
PGD1P40356 FCY21YER060W 1587 nt7.06□□□□□ -1.28
PGD1P40356 HXT9YJL219W 1704 nt7.06□□□□□ -1.28
PGD1P40356 THI3YDL080C 1830 nt7.06□□□□□ -1.28
PGD1P40356 GGA2YHR108W 1758 nt7.05□□□□□ -1.28
PGD1P40356 MSB4YOL112W 1479 nt7.05□□□□□ -1.28
PGD1P40356 CRC1YOR100C 984 nt7.04□□□□□ -1.28
PGD1P40356 snR31snR31 225 nt7.04□□□□□ -1.28
PGD1P40356 AQR1YNL065W 1761 nt7.04□□□□□ -1.28
PGD1P40356 ABP1YCR088W 1779 nt7.03□□□□□ -1.28
PGD1P40356 snR86snR86 1004 nt7.03□□□□□ -1.28
PGD1P40356 RRT6YGL146C 936 nt7.03□□□□□ -1.28
PGD1P40356 ESS1YJR017C 513 nt7.03□□□□□ -1.28
PGD1P40356 ATO2YNR002C 849 nt7.03□□□□□ -1.28
PGD1P40356 SAM50YNL026W 1455 nt7.03□□□□□ -1.28
PGD1P40356 RRT8YOL048C 1029 nt7.02□□□□□ -1.29
PGD1P40356 HIS3YOR202W 663 nt7.02□□□□□ -1.29
PGD1P40356 YIL108WYIL108W 2091 nt7.02□□□□□ -1.29
PGD1P40356 NDE2YDL085W 1638 nt7.01□□□□□ -1.29
PGD1P40356 YNL040WYNL040W 1371 nt7.01□□□□□ -1.29
PGD1P40356 DDI1YER143W 1287 nt7.01□□□□□ -1.29
PGD1P40356 YFL015W-AYFL015W-A 318 nt7.01□□□□□ -1.29
PGD1P40356 POB3YML069W 1659 nt7□□□□□ -1.29
PGD1P40356 WSC4YHL028W 1818 nt7□□□□□ -1.29
PGD1P40356 YGR012WYGR012W 1182 nt7□□□□□ -1.29
PGD1P40356 YMR316C-BYMR316C-B 309 nt7□□□□□ -1.29
PGD1P40356 MAS2YHR024C 1449 nt7□□□□□ -1.29
PGD1P40356 SAM3YPL274W 1764 nt7□□□□□ -1.29
PGD1P40356 RPT5YOR117W 1305 nt7□□□□□ -1.29
PGD1P40356 YDR510C-AYDR510C-A 117 nt6.98□□□□□ -1.29
PGD1P40356 TPS1YBR126C 1488 nt6.98□□□□□ -1.29
PGD1P40356 KGD2YDR148C 1392 nt6.97□□□□□ -1.29
PGD1P40356 YJR114WYJR114W 393 nt6.97□□□□□ -1.29
PGD1P40356 HXT13YEL069C 1695 nt6.96□□□□□ -1.3
PGD1P40356 AFG2YLR397C 2343 nt6.95□□□□□ -1.3
PGD1P40356 PRY1YJL079C 900 nt6.95□□□□□ -1.3
PGD1P40356 TMA23YMR269W 636 nt6.95□□□□□ -1.3
PGD1P40356 SDH5YOL071W 489 nt6.95□□□□□ -1.3
PGD1P40356 AAC3YBR085W 924 nt6.94□□□□□ -1.3
PGD1P40356 TIF3YPR163C 1311 nt6.94□□□□□ -1.3
PGD1P40356 LYS20YDL182W 1287 nt6.93□□□□□ -1.3
PGD1P40356 YNL140CYNL140C 570 nt6.93□□□□□ -1.3
PGD1P40356 SGF73YGL066W 1974 nt6.93□□□□□ -1.3
PGD1P40356 MET1YKR069W 1782 nt6.92□□□□□ -1.3
PGD1P40356 ADE8YDR408C 645 nt6.92□□□□□ -1.3
PGD1P40356 SBP1YHL034C 885 nt6.92□□□□□ -1.3
PGD1P40356 APS2YJR058C 444 nt6.92□□□□□ -1.3
PGD1P40356 YEL023CYEL023C 2049 nt6.92□□□□□ -1.3
PGD1P40356 MET13YGL125W 1803 nt6.92□□□□□ -1.3
PGD1P40356 RPL2AYFR031C-A 765 nt6.91□□□□□ -1.3
PGD1P40356 IMO32YGR031W 1029 nt6.91□□□□□ -1.3
PGD1P40356 YJL118WYJL118W 660 nt6.91□□□□□ -1.3
PGD1P40356 SWT21YNL187W 1074 nt6.91□□□□□ -1.3
PGD1P40356 OPI3YJR073C 621 nt6.89□□□□□ -1.31
PGD1P40356 CAB5YDR196C 726 nt6.88□□□□□ -1.31
PGD1P40356 YPL222C-AYPL222C-A 246 nt6.88□□□□□ -1.31
PGD1P40356 PAR32YDL173W 888 nt6.87□□□□□ -1.31
PGD1P40356 YER137CYER137C 447 nt6.87□□□□□ -1.31
PGD1P40356 SMM1YNR015W 1155 nt6.87□□□□□ -1.31
PGD1P40356 MSB3YNL293W 1902 nt6.86□□□□□ -1.31
PGD1P40356 STF1YDL130W-A 261 nt6.86□□□□□ -1.31
PGD1P40356 RAD23YEL037C 1197 nt6.86□□□□□ -1.31
PGD1P40356 APT1YML022W 564 nt6.86□□□□□ -1.31
PGD1P40356 FCP1YMR277W 2199 nt6.85□□□□□ -1.31
PGD1P40356 CCR4YAL021C 2514 nt6.85□□□□□ -1.31
PGD1P40356 BNA3YJL060W 1335 nt6.85□□□□□ -1.31
PGD1P40356 RSC9YML127W 1746 nt6.84□□□□□ -1.31
PGD1P40356 YJL009WYJL009W 327 nt6.84□□□□□ -1.31
PGD1P40356 RIB7YBR153W 735 nt6.84□□□□□ -1.31
PGD1P40356 TMS1YDR105C 1422 nt6.84□□□□□ -1.32
PGD1P40356 GUT1YHL032C 2130 nt6.83□□□□□ -1.32
PGD1P40356 RPL12BYDR418W 498 nt6.83□□□□□ -1.32
PGD1P40356 INM1YHR046C 888 nt6.83□□□□□ -1.32
PGD1P40356 YKL053WYKL053W 375 nt6.83□□□□□ -1.32
PGD1P40356 YLR030WYLR030W 792 nt6.83□□□□□ -1.32
PGD1P40356 YDR306CYDR306C 1437 nt6.83□□□□□ -1.32
PGD1P40356 YBL111CYBL111C 2004 nt6.83□□□□□ -1.32
PGD1P40356 GLY1YEL046C 1164 nt6.82□□□□□ -1.32
PGD1P40356 MRN1YPL184C 1839 nt6.82□□□□□ -1.32
PGD1P40356 RIB3YDR487C 627 nt6.81□□□□□ -1.32
PGD1P40356 SAN1YDR143C 1833 nt6.8□□□□□ -1.32
PGD1P40356 TGL5YOR081C 2250 nt6.79□□□□□ -1.32
PGD1P40356 YJL055WYJL055W 738 nt6.79□□□□□ -1.32
PGD1P40356 INO1YJL153C 1602 nt6.79□□□□□ -1.32
PGD1P40356 YKR018CYKR018C 2178 nt6.78□□□□□ -1.32
PGD1P40356 TVP23YDR084C 600 nt6.78□□□□□ -1.32
PGD1P40356 LRO1YNR008W 1986 nt6.77□□□□□ -1.33
PGD1P40356 BUD31YCR063W 474 nt6.77□□□□□ -1.33
Retrieved 100 of 7,029 protein–RNA pairs in 29.7 ms