Protein–RNA interactions for Protein: P40215

NDE1, External NADH-ubiquinone oxidoreductase 1, mitochondrial, yeastyeast

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NDE1P40215 snR31snR31 225 nt8.23□□□□□ -1.09
NDE1P40215 LEU2YCL018W 1095 nt8.23□□□□□ -1.09
NDE1P40215 TOM71YHR117W 1920 nt8.23□□□□□ -1.09
NDE1P40215 THI6YPL214C 1623 nt8.22□□□□□ -1.09
NDE1P40215 HAP5YOR358W 729 nt8.22□□□□□ -1.09
NDE1P40215 YMR265CYMR265C 1386 nt8.22□□□□□ -1.09
NDE1P40215 NAS2YIL007C 663 nt8.21□□□□□ -1.1
NDE1P40215 PAU19YMR325W 375 nt8.21□□□□□ -1.1
NDE1P40215 THP3YPR045C 1413 nt8.2□□□□□ -1.1
NDE1P40215 SUV3YPL029W 2214 nt8.2□□□□□ -1.1
NDE1P40215 SWT21YNL187W 1074 nt8.2□□□□□ -1.1
NDE1P40215 SNX3YOR357C 489 nt8.2□□□□□ -1.1
NDE1P40215 MAM3YOL060C 2121 nt8.2□□□□□ -1.1
NDE1P40215 GCD11YER025W 1584 nt8.19□□□□□ -1.1
NDE1P40215 FSH2YMR222C 672 nt8.19□□□□□ -1.1
NDE1P40215 SFL1YOR140W 2301 nt8.18□□□□□ -1.1
NDE1P40215 PUP1YOR157C 786 nt8.18□□□□□ -1.1
NDE1P40215 MET1YKR069W 1782 nt8.17□□□□□ -1.1
NDE1P40215 TIM44YIL022W 1296 nt8.17□□□□□ -1.1
NDE1P40215 NAM8YHR086W 1572 nt8.16□□□□□ -1.1
NDE1P40215 MDM35YKL053C-A 261 nt8.16□□□□□ -1.1
NDE1P40215 CWP2YKL096W-A 279 nt8.16□□□□□ -1.1
NDE1P40215 CDD1YLR245C 429 nt8.16□□□□□ -1.1
NDE1P40215 HDA1YNL021W 2121 nt8.16□□□□□ -1.1
NDE1P40215 YPL041CYPL041C 624 nt8.16□□□□□ -1.1
NDE1P40215 KRR1YCL059C 951 nt8.14□□□□□ -1.11
NDE1P40215 STF1YDL130W-A 261 nt8.14□□□□□ -1.11
NDE1P40215 CRC1YOR100C 984 nt8.14□□□□□ -1.11
NDE1P40215 MEX67YPL169C 1800 nt8.14□□□□□ -1.11
NDE1P40215 tA(AGC)DtA(AGC)D 73 nt8.13□□□□□ -1.11
NDE1P40215 tA(AGC)FtA(AGC)F 73 nt8.13□□□□□ -1.11
NDE1P40215 tA(AGC)GtA(AGC)G 73 nt8.13□□□□□ -1.11
NDE1P40215 tA(AGC)HtA(AGC)H 73 nt8.13□□□□□ -1.11
NDE1P40215 tA(AGC)JtA(AGC)J 73 nt8.13□□□□□ -1.11
NDE1P40215 tA(AGC)K1tA(AGC)K1 73 nt8.13□□□□□ -1.11
NDE1P40215 tA(AGC)K2tA(AGC)K2 73 nt8.13□□□□□ -1.11
NDE1P40215 tA(AGC)LtA(AGC)L 73 nt8.13□□□□□ -1.11
NDE1P40215 tA(AGC)M1tA(AGC)M1 73 nt8.13□□□□□ -1.11
NDE1P40215 tA(AGC)M2tA(AGC)M2 73 nt8.13□□□□□ -1.11
NDE1P40215 tA(AGC)PtA(AGC)P 73 nt8.13□□□□□ -1.11
NDE1P40215 YKL053WYKL053W 375 nt8.13□□□□□ -1.11
NDE1P40215 YKR012CYKR012C 378 nt8.13□□□□□ -1.11
NDE1P40215 IPL1YPL209C 1104 nt8.13□□□□□ -1.11
NDE1P40215 MDL2YPL270W 2322 nt8.11□□□□□ -1.11
NDE1P40215 MOB1YIL106W 945 nt8.11□□□□□ -1.11
NDE1P40215 ADH3YMR083W 1128 nt8.11□□□□□ -1.11
NDE1P40215 DUR3YHL016C 2208 nt8.11□□□□□ -1.11
NDE1P40215 TPN1YGL186C 1740 nt8.11□□□□□ -1.11
NDE1P40215 YKR023WYKR023W 1593 nt8.1□□□□□ -1.11
NDE1P40215 YCR025CYCR025C 411 nt8.1□□□□□ -1.11
NDE1P40215 PHB2YGR231C 933 nt8.1□□□□□ -1.11
NDE1P40215 FLX1YIL134W 936 nt8.1□□□□□ -1.11
NDE1P40215 REX2YLR059C 810 nt8.1□□□□□ -1.11
NDE1P40215 RPC31YNL151C 756 nt8.1□□□□□ -1.11
NDE1P40215 SRP54YPR088C 1626 nt8.1□□□□□ -1.11
NDE1P40215 MTO1YGL236C 2010 nt8.1□□□□□ -1.11
NDE1P40215 NBA1YOL070C 1506 nt8.08□□□□□ -1.12
NDE1P40215 YRF1-2YER190W 5046 nt8.07□□□□□ -1.12
NDE1P40215 RIM2YBR192W 1134 nt8.07□□□□□ -1.12
NDE1P40215 SDS24YBR214W 1584 nt8.06□□□□□ -1.12
NDE1P40215 SLG1YOR008C 1137 nt8.06□□□□□ -1.12
NDE1P40215 KGD2YDR148C 1392 nt8.06□□□□□ -1.12
NDE1P40215 SAN1YDR143C 1833 nt8.06□□□□□ -1.12
NDE1P40215 CYC3YAL039C 810 nt8.05□□□□□ -1.12
NDE1P40215 AGP3YFL055W 1677 nt8.05□□□□□ -1.12
NDE1P40215 ENO1YGR254W 1314 nt8.04□□□□□ -1.12
NDE1P40215 GUT1YHL032C 2130 nt8.04□□□□□ -1.12
NDE1P40215 YPT11YNL304W 1254 nt8.04□□□□□ -1.12
NDE1P40215 SBP1YHL034C 885 nt8.03□□□□□ -1.12
NDE1P40215 DPL1YDR294C 1770 nt8.02□□□□□ -1.13
NDE1P40215 VBA3YCL069W 1377 nt8.02□□□□□ -1.13
NDE1P40215 SGV1YPR161C 1974 nt8.01□□□□□ -1.13
NDE1P40215 GAS1YMR307W 1680 nt7.99□□□□□ -1.13
NDE1P40215 YCP4YCR004C 744 nt7.99□□□□□ -1.13
NDE1P40215 SER2YGR208W 930 nt7.98□□□□□ -1.13
NDE1P40215 SRP102YKL154W 735 nt7.98□□□□□ -1.13
NDE1P40215 PTC6YCR079W 1329 nt7.98□□□□□ -1.13
NDE1P40215 LYS20YDL182W 1287 nt7.97□□□□□ -1.13
NDE1P40215 RSM7YJR113C 744 nt7.97□□□□□ -1.13
NDE1P40215 YLR280CYLR280C 351 nt7.97□□□□□ -1.13
NDE1P40215 MIM1YOL026C 342 nt7.97□□□□□ -1.13
NDE1P40215 SAM50YNL026W 1455 nt7.97□□□□□ -1.13
NDE1P40215 tD(GUC)BtD(GUC)B 72 nt7.96□□□□□ -1.14
NDE1P40215 tD(GUC)DtD(GUC)D 72 nt7.96□□□□□ -1.14
NDE1P40215 tD(GUC)G1tD(GUC)G1 72 nt7.96□□□□□ -1.14
NDE1P40215 tD(GUC)G2tD(GUC)G2 72 nt7.96□□□□□ -1.14
NDE1P40215 tD(GUC)I1tD(GUC)I1 72 nt7.96□□□□□ -1.14
NDE1P40215 tD(GUC)I2tD(GUC)I2 72 nt7.96□□□□□ -1.14
NDE1P40215 tD(GUC)J1tD(GUC)J1 72 nt7.96□□□□□ -1.14
NDE1P40215 tD(GUC)J2tD(GUC)J2 72 nt7.96□□□□□ -1.14
NDE1P40215 tD(GUC)J3tD(GUC)J3 72 nt7.96□□□□□ -1.14
NDE1P40215 tD(GUC)J4tD(GUC)J4 72 nt7.96□□□□□ -1.14
NDE1P40215 tD(GUC)KtD(GUC)K 72 nt7.96□□□□□ -1.14
NDE1P40215 tD(GUC)L1tD(GUC)L1 72 nt7.96□□□□□ -1.14
NDE1P40215 tD(GUC)L2tD(GUC)L2 72 nt7.96□□□□□ -1.14
NDE1P40215 tD(GUC)MtD(GUC)M 72 nt7.96□□□□□ -1.14
NDE1P40215 tD(GUC)OtD(GUC)O 72 nt7.96□□□□□ -1.14
NDE1P40215 YDR467CYDR467C 327 nt7.96□□□□□ -1.14
NDE1P40215 INH1YDL181W 258 nt7.95□□□□□ -1.14
NDE1P40215 UFD1YGR048W 1086 nt7.95□□□□□ -1.14
Retrieved 100 of 7,029 protein–RNA pairs in 47.4 ms