Protein–RNA interactions for Protein: P39904

VPS52, Vacuolar protein sorting-associated protein 52, yeastyeast

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS52P39904 PHB2YGR231C 933 nt7.8□□□□□ -1.16
VPS52P39904 MOB1YIL106W 945 nt7.8□□□□□ -1.16
VPS52P39904 CWP2YKL096W-A 279 nt7.8□□□□□ -1.16
VPS52P39904 VMA11YPL234C 495 nt7.8□□□□□ -1.16
VPS52P39904 RPD3YNL330C 1302 nt7.79□□□□□ -1.16
VPS52P39904 RPN14YGL004C 1254 nt7.79□□□□□ -1.16
VPS52P39904 YKR012CYKR012C 378 nt7.79□□□□□ -1.16
VPS52P39904 SWT21YNL187W 1074 nt7.79□□□□□ -1.16
VPS52P39904 SOD2YHR008C 702 nt7.78□□□□□ -1.16
VPS52P39904 NAM8YHR086W 1572 nt7.78□□□□□ -1.16
VPS52P39904 SFL1YOR140W 2301 nt7.77□□□□□ -1.17
VPS52P39904 YMR265CYMR265C 1386 nt7.77□□□□□ -1.17
VPS52P39904 SUV3YPL029W 2214 nt7.77□□□□□ -1.17
VPS52P39904 HAP5YOR358W 729 nt7.77□□□□□ -1.17
VPS52P39904 HXT10YFL011W 1641 nt7.75□□□□□ -1.17
VPS52P39904 SER2YGR208W 930 nt7.75□□□□□ -1.17
VPS52P39904 SDS24YBR214W 1584 nt7.75□□□□□ -1.17
VPS52P39904 ENO1YGR254W 1314 nt7.75□□□□□ -1.17
VPS52P39904 LYS20YDL182W 1287 nt7.74□□□□□ -1.17
VPS52P39904 SWM1YDR260C 513 nt7.74□□□□□ -1.17
VPS52P39904 SNX3YOR357C 489 nt7.74□□□□□ -1.17
VPS52P39904 HTS1YPR033C 1641 nt7.74□□□□□ -1.17
VPS52P39904 MET1YKR069W 1782 nt7.74□□□□□ -1.17
VPS52P39904 SRP102YKL154W 735 nt7.73□□□□□ -1.17
VPS52P39904 REX2YLR059C 810 nt7.73□□□□□ -1.17
VPS52P39904 ERG6YML008C 1152 nt7.73□□□□□ -1.17
VPS52P39904 YMR007WYMR007W 381 nt7.73□□□□□ -1.17
VPS52P39904 RCR1YBR005W 642 nt7.73□□□□□ -1.17
VPS52P39904 KRR1YCL059C 951 nt7.72□□□□□ -1.17
VPS52P39904 YOR072WYOR072W 315 nt7.71□□□□□ -1.18
VPS52P39904 DPL1YDR294C 1770 nt7.71□□□□□ -1.18
VPS52P39904 SRP54YPR088C 1626 nt7.7□□□□□ -1.18
VPS52P39904 RPC31YNL151C 756 nt7.7□□□□□ -1.18
VPS52P39904 YPT11YNL304W 1254 nt7.7□□□□□ -1.18
VPS52P39904 VBA3YCL069W 1377 nt7.7□□□□□ -1.18
VPS52P39904 YKL053WYKL053W 375 nt7.69□□□□□ -1.18
VPS52P39904 CRC1YOR100C 984 nt7.69□□□□□ -1.18
VPS52P39904 MTO1YGL236C 2010 nt7.69□□□□□ -1.18
VPS52P39904 RSC4YKR008W 1878 nt7.68□□□□□ -1.18
VPS52P39904 RIM2YBR192W 1134 nt7.68□□□□□ -1.18
VPS52P39904 YLR280CYLR280C 351 nt7.67□□□□□ -1.18
VPS52P39904 AGP3YFL055W 1677 nt7.67□□□□□ -1.18
VPS52P39904 ERO1YML130C 1692 nt7.67□□□□□ -1.18
VPS52P39904 SAN1YDR143C 1833 nt7.65□□□□□ -1.18
VPS52P39904 YGR210CYGR210C 1236 nt7.65□□□□□ -1.18
VPS52P39904 POP2YNR052C 1302 nt7.65□□□□□ -1.18
VPS52P39904 NBA1YOL070C 1506 nt7.65□□□□□ -1.18
VPS52P39904 YRF1-3YGR296W 5580 nt7.65□□□□□ -1.19
VPS52P39904 YRF1-6YNL339C 5580 nt7.65□□□□□ -1.19
VPS52P39904 YRF1-7YPL283C 5580 nt7.65□□□□□ -1.19
VPS52P39904 MCM5YLR274W 2328 nt7.64□□□□□ -1.19
VPS52P39904 INH1YDL181W 258 nt7.62□□□□□ -1.19
VPS52P39904 YFR020WYFR020W 699 nt7.62□□□□□ -1.19
VPS52P39904 RSM7YJR113C 744 nt7.62□□□□□ -1.19
VPS52P39904 KGD2YDR148C 1392 nt7.61□□□□□ -1.19
VPS52P39904 SBP1YHL034C 885 nt7.61□□□□□ -1.19
VPS52P39904 LEU4YNL104C 1860 nt7.61□□□□□ -1.19
VPS52P39904 YER152W-AYER152W-A 567 nt7.6□□□□□ -1.19
VPS52P39904 GAS1YMR307W 1680 nt7.6□□□□□ -1.19
VPS52P39904 FRA1YLL029W 2250 nt7.59□□□□□ -1.19
VPS52P39904 TGA1tA(UGC)A 73 nt7.59□□□□□ -1.19
VPS52P39904 tA(UGC)EtA(UGC)E 73 nt7.59□□□□□ -1.19
VPS52P39904 tA(UGC)GtA(UGC)G 73 nt7.59□□□□□ -1.19
VPS52P39904 tA(UGC)LtA(UGC)L 73 nt7.59□□□□□ -1.19
VPS52P39904 tA(UGC)OtA(UGC)O 73 nt7.59□□□□□ -1.19
VPS52P39904 YPL108WYPL108W 507 nt7.59□□□□□ -1.19
VPS52P39904 PTC6YCR079W 1329 nt7.57□□□□□ -1.2
VPS52P39904 FCY1YPR062W 477 nt7.57□□□□□ -1.2
VPS52P39904 TPN1YGL186C 1740 nt7.57□□□□□ -1.2
VPS52P39904 MDL2YPL270W 2322 nt7.56□□□□□ -1.2
VPS52P39904 MEX67YPL169C 1800 nt7.56□□□□□ -1.2
VPS52P39904 YIL177CYIL177C 5277 nt7.54□□□□□ -1.2
VPS52P39904 tE(CUC)DtE(CUC)D 72 nt7.54□□□□□ -1.2
VPS52P39904 tE(CUC)ItE(CUC)I 72 nt7.54□□□□□ -1.2
VPS52P39904 YDR467CYDR467C 327 nt7.54□□□□□ -1.2
VPS52P39904 YLR460CYLR460C 1131 nt7.54□□□□□ -1.2
VPS52P39904 GGA2YHR108W 1758 nt7.52□□□□□ -1.21
VPS52P39904 YMR166CYMR166C 1107 nt7.52□□□□□ -1.21
VPS52P39904 TOM71YHR117W 1920 nt7.52□□□□□ -1.21
VPS52P39904 THI3YDL080C 1830 nt7.52□□□□□ -1.21
VPS52P39904 NPP2YEL016C 1482 nt7.51□□□□□ -1.21
VPS52P39904 GPM1YKL152C 744 nt7.51□□□□□ -1.21
VPS52P39904 BUD20YLR074C 501 nt7.51□□□□□ -1.21
VPS52P39904 MIM1YOL026C 342 nt7.51□□□□□ -1.21
VPS52P39904 YJL160CYJL160C 864 nt7.5□□□□□ -1.21
VPS52P39904 YMR316C-BYMR316C-B 309 nt7.5□□□□□ -1.21
VPS52P39904 tD(GUC)BtD(GUC)B 72 nt7.49□□□□□ -1.21
VPS52P39904 tD(GUC)DtD(GUC)D 72 nt7.49□□□□□ -1.21
VPS52P39904 tD(GUC)G1tD(GUC)G1 72 nt7.49□□□□□ -1.21
VPS52P39904 tD(GUC)G2tD(GUC)G2 72 nt7.49□□□□□ -1.21
VPS52P39904 tD(GUC)I1tD(GUC)I1 72 nt7.49□□□□□ -1.21
VPS52P39904 tD(GUC)I2tD(GUC)I2 72 nt7.49□□□□□ -1.21
VPS52P39904 tD(GUC)J1tD(GUC)J1 72 nt7.49□□□□□ -1.21
VPS52P39904 tD(GUC)J2tD(GUC)J2 72 nt7.49□□□□□ -1.21
VPS52P39904 tD(GUC)J3tD(GUC)J3 72 nt7.49□□□□□ -1.21
VPS52P39904 tD(GUC)J4tD(GUC)J4 72 nt7.49□□□□□ -1.21
VPS52P39904 tD(GUC)KtD(GUC)K 72 nt7.49□□□□□ -1.21
VPS52P39904 tD(GUC)L1tD(GUC)L1 72 nt7.49□□□□□ -1.21
VPS52P39904 tD(GUC)L2tD(GUC)L2 72 nt7.49□□□□□ -1.21
VPS52P39904 tD(GUC)MtD(GUC)M 72 nt7.49□□□□□ -1.21
Retrieved 100 of 7,029 protein–RNA pairs in 65.7 ms