Protein–RNA interactions for Protein: P25594

VBA3, Vacuolar basic amino acid transporter 3, yeastyeast

Predictions only

Length 458 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VBA3P25594 COG1YGL223C 1254 nt8.83□□□□□ -1
VBA3P25594 REX2YLR059C 810 nt8.83□□□□□ -1
VBA3P25594 LYS20YDL182W 1287 nt8.82□□□□□ -1
VBA3P25594 CYC3YAL039C 810 nt8.81□□□□□ -1
VBA3P25594 SSL2YIL143C 2532 nt8.81□□□□□ -1
VBA3P25594 SRP54YPR088C 1626 nt8.8□□□□□ -1
VBA3P25594 VBA3YCL069W 1377 nt8.79□□□□□ -1
VBA3P25594 SWM1YDR260C 513 nt8.79□□□□□ -1
VBA3P25594 SER2YGR208W 930 nt8.79□□□□□ -1
VBA3P25594 RIM2YBR192W 1134 nt8.79□□□□□ -1
VBA3P25594 SAN1YDR143C 1833 nt8.79□□□□□ -1
VBA3P25594 CWP2YKL096W-A 279 nt8.78□□□□□ -1
VBA3P25594 ENO1YGR254W 1314 nt8.78□□□□□ -1
VBA3P25594 ARO7YPR060C 771 nt8.77□□□□□ -1.01
VBA3P25594 KGD2YDR148C 1392 nt8.76□□□□□ -1.01
VBA3P25594 YIA6YIL006W 1122 nt8.75□□□□□ -1.01
VBA3P25594 RIB1YBL033C 1038 nt8.75□□□□□ -1.01
VBA3P25594 ODC1YPL134C 933 nt8.75□□□□□ -1.01
VBA3P25594 SRP102YKL154W 735 nt8.74□□□□□ -1.01
VBA3P25594 YLR280CYLR280C 351 nt8.73□□□□□ -1.01
VBA3P25594 RPC31YNL151C 756 nt8.73□□□□□ -1.01
VBA3P25594 HTS1YPR033C 1641 nt8.72□□□□□ -1.01
VBA3P25594 KRR1YCL059C 951 nt8.72□□□□□ -1.01
VBA3P25594 RIM8YGL045W 1629 nt8.72□□□□□ -1.01
VBA3P25594 ERO1YML130C 1692 nt8.72□□□□□ -1.01
VBA3P25594 URH1YDR400W 1023 nt8.71□□□□□ -1.02
VBA3P25594 SOD2YHR008C 702 nt8.71□□□□□ -1.02
VBA3P25594 YPT11YNL304W 1254 nt8.71□□□□□ -1.02
VBA3P25594 TGA1tA(UGC)A 73 nt8.7□□□□□ -1.02
VBA3P25594 tA(UGC)EtA(UGC)E 73 nt8.7□□□□□ -1.02
VBA3P25594 tA(UGC)GtA(UGC)G 73 nt8.7□□□□□ -1.02
VBA3P25594 tA(UGC)LtA(UGC)L 73 nt8.7□□□□□ -1.02
VBA3P25594 tA(UGC)OtA(UGC)O 73 nt8.7□□□□□ -1.02
VBA3P25594 LCP5YER127W 1074 nt8.7□□□□□ -1.02
VBA3P25594 ERG6YML008C 1152 nt8.7□□□□□ -1.02
VBA3P25594 YGL114WYGL114W 2178 nt8.7□□□□□ -1.02
VBA3P25594 FTH1YBR207W 1398 nt8.7□□□□□ -1.02
VBA3P25594 DPL1YDR294C 1770 nt8.69□□□□□ -1.02
VBA3P25594 YFR020WYFR020W 699 nt8.68□□□□□ -1.02
VBA3P25594 YGR210CYGR210C 1236 nt8.68□□□□□ -1.02
VBA3P25594 SBP1YHL034C 885 nt8.68□□□□□ -1.02
VBA3P25594 HEM14YER014W 1620 nt8.68□□□□□ -1.02
VBA3P25594 PTC6YCR079W 1329 nt8.67□□□□□ -1.02
VBA3P25594 FAF1YIL019W 1041 nt8.67□□□□□ -1.02
VBA3P25594 YMR007WYMR007W 381 nt8.67□□□□□ -1.02
VBA3P25594 GAS1YMR307W 1680 nt8.67□□□□□ -1.02
VBA3P25594 HEL2YDR266C 1920 nt8.66□□□□□ -1.02
VBA3P25594 MDM35YKL053C-A 261 nt8.65□□□□□ -1.02
VBA3P25594 FCY1YPR062W 477 nt8.63□□□□□ -1.03
VBA3P25594 YTH1YPR107C 627 nt8.63□□□□□ -1.03
VBA3P25594 YMR209CYMR209C 1374 nt8.62□□□□□ -1.03
VBA3P25594 RSM7YJR113C 744 nt8.61□□□□□ -1.03
VBA3P25594 RCR1YBR005W 642 nt8.61□□□□□ -1.03
VBA3P25594 YPL108WYPL108W 507 nt8.61□□□□□ -1.03
VBA3P25594 THI3YDL080C 1830 nt8.59□□□□□ -1.03
VBA3P25594 YMR316C-BYMR316C-B 309 nt8.59□□□□□ -1.03
VBA3P25594 GID7YCL039W 2238 nt8.59□□□□□ -1.03
VBA3P25594 ESBP6YNL125C 2022 nt8.59□□□□□ -1.03
VBA3P25594 SFP1YLR403W 2052 nt8.58□□□□□ -1.04
VBA3P25594 GGA2YHR108W 1758 nt8.58□□□□□ -1.04
VBA3P25594 LEU4YNL104C 1860 nt8.57□□□□□ -1.04
VBA3P25594 DMA2YNL116W 1569 nt8.57□□□□□ -1.04
VBA3P25594 GPM1YKL152C 744 nt8.57□□□□□ -1.04
VBA3P25594 NPP1YCR026C 2229 nt8.57□□□□□ -1.04
VBA3P25594 POP2YNR052C 1302 nt8.56□□□□□ -1.04
VBA3P25594 YDR467CYDR467C 327 nt8.56□□□□□ -1.04
VBA3P25594 YER152W-AYER152W-A 567 nt8.56□□□□□ -1.04
VBA3P25594 AI5_BETAQ0075 1065 nt8.55□□□□□ -1.04
VBA3P25594 MET2YNL277W 1461 nt8.55□□□□□ -1.04
VBA3P25594 YJL160CYJL160C 864 nt8.54□□□□□ -1.04
VBA3P25594 PUS5YLR165C 765 nt8.54□□□□□ -1.04
VBA3P25594 YMR166CYMR166C 1107 nt8.53□□□□□ -1.04
VBA3P25594 LSP1YPL004C 1026 nt8.53□□□□□ -1.04
VBA3P25594 GNP1YDR508C 1992 nt8.52□□□□□ -1.05
VBA3P25594 HXT10YFL011W 1641 nt8.51□□□□□ -1.05
VBA3P25594 tE(CUC)DtE(CUC)D 72 nt8.51□□□□□ -1.05
VBA3P25594 tE(CUC)ItE(CUC)I 72 nt8.51□□□□□ -1.05
VBA3P25594 FHN1YGR131W 525 nt8.51□□□□□ -1.05
VBA3P25594 YLR460CYLR460C 1131 nt8.51□□□□□ -1.05
VBA3P25594 CBK1YNL161W 2271 nt8.49□□□□□ -1.05
VBA3P25594 EMC3YKL207W 762 nt8.49□□□□□ -1.05
VBA3P25594 KDX1YKL161C 1302 nt8.49□□□□□ -1.05
VBA3P25594 YMR210WYMR210W 1350 nt8.48□□□□□ -1.05
VBA3P25594 PET18YCR020C 648 nt8.48□□□□□ -1.05
VBA3P25594 INH1YDL181W 258 nt8.48□□□□□ -1.05
VBA3P25594 CAK1YFL029C 1107 nt8.48□□□□□ -1.05
VBA3P25594 YBL095WYBL095W 813 nt8.48□□□□□ -1.05
VBA3P25594 MET22YOL064C 1074 nt8.48□□□□□ -1.05
VBA3P25594 OCH1YGL038C 1443 nt8.47□□□□□ -1.05
VBA3P25594 CHS7YHR142W 951 nt8.47□□□□□ -1.05
VBA3P25594 YHR218WYHR218W 1812 nt8.47□□□□□ -1.05
VBA3P25594 MLS1YNL117W 1665 nt8.46□□□□□ -1.05
VBA3P25594 YLR122CYLR122C 378 nt8.46□□□□□ -1.06
VBA3P25594 AAC3YBR085W 924 nt8.46□□□□□ -1.06
VBA3P25594 AGP3YFL055W 1677 nt8.46□□□□□ -1.06
VBA3P25594 RRT14YIL127C 621 nt8.45□□□□□ -1.06
VBA3P25594 YMC2YBR104W 990 nt8.45□□□□□ -1.06
VBA3P25594 PSD1YNL169C 1503 nt8.44□□□□□ -1.06
VBA3P25594 BUD20YLR074C 501 nt8.44□□□□□ -1.06
VBA3P25594 RNA170RNA170 169 nt8.44□□□□□ -1.06
Retrieved 100 of 7,029 protein–RNA pairs in 8.7 ms