Protein–RNA interactions for Protein: P23643

VPS3, Vacuolar protein sorting-associated protein 3, yeastyeast

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS3P23643 SDS24YBR214W 1584 nt8.88□□□□□ -0.99
VPS3P23643 SRP102YKL154W 735 nt8.88□□□□□ -0.99
VPS3P23643 YRF1-2YER190W 5046 nt8.88□□□□□ -0.99
VPS3P23643 YER152W-AYER152W-A 567 nt8.87□□□□□ -0.99
VPS3P23643 ITR2YOL103W 1830 nt8.86□□□□□ -0.99
VPS3P23643 REX2YLR059C 810 nt8.85□□□□□ -0.99
VPS3P23643 RPN14YGL004C 1254 nt8.84□□□□□ -0.99
VPS3P23643 SFL1YOR140W 2301 nt8.84□□□□□ -0.99
VPS3P23643 HAP5YOR358W 729 nt8.83□□□□□ -1
VPS3P23643 YMR265CYMR265C 1386 nt8.83□□□□□ -1
VPS3P23643 SUV3YPL029W 2214 nt8.82□□□□□ -1
VPS3P23643 DMA2YNL116W 1569 nt8.82□□□□□ -1
VPS3P23643 MET1YKR069W 1782 nt8.82□□□□□ -1
VPS3P23643 YLR280CYLR280C 351 nt8.82□□□□□ -1
VPS3P23643 VMA11YPL234C 495 nt8.82□□□□□ -1
VPS3P23643 VBA3YCL069W 1377 nt8.82□□□□□ -1
VPS3P23643 ERO1YML130C 1692 nt8.81□□□□□ -1
VPS3P23643 MCM5YLR274W 2328 nt8.8□□□□□ -1
VPS3P23643 YGR210CYGR210C 1236 nt8.8□□□□□ -1
VPS3P23643 GID8YMR135C 1368 nt8.8□□□□□ -1
VPS3P23643 SRP54YPR088C 1626 nt8.8□□□□□ -1
VPS3P23643 YKL053WYKL053W 375 nt8.78□□□□□ -1
VPS3P23643 BUD20YLR074C 501 nt8.78□□□□□ -1
VPS3P23643 HXK1YFR053C 1458 nt8.77□□□□□ -1
VPS3P23643 MAS1YLR163C 1389 nt8.77□□□□□ -1.01
VPS3P23643 TGA1tA(UGC)A 73 nt8.77□□□□□ -1.01
VPS3P23643 tA(UGC)EtA(UGC)E 73 nt8.77□□□□□ -1.01
VPS3P23643 tA(UGC)GtA(UGC)G 73 nt8.77□□□□□ -1.01
VPS3P23643 tA(UGC)LtA(UGC)L 73 nt8.77□□□□□ -1.01
VPS3P23643 tA(UGC)OtA(UGC)O 73 nt8.77□□□□□ -1.01
VPS3P23643 YPT11YNL304W 1254 nt8.77□□□□□ -1.01
VPS3P23643 YHR219WYHR219W 1875 nt8.77□□□□□ -1.01
VPS3P23643 CRC1YOR100C 984 nt8.76□□□□□ -1.01
VPS3P23643 FCY1YPR062W 477 nt8.75□□□□□ -1.01
VPS3P23643 YKL133CYKL133C 1392 nt8.74□□□□□ -1.01
VPS3P23643 ALD5YER073W 1563 nt8.74□□□□□ -1.01
VPS3P23643 ZAP1YJL056C 2643 nt8.74□□□□□ -1.01
VPS3P23643 LSR1LSR1 1175 nt8.74□□□□□ -1.01
VPS3P23643 SNX3YOR357C 489 nt8.74□□□□□ -1.01
VPS3P23643 YFR020WYFR020W 699 nt8.73□□□□□ -1.01
VPS3P23643 YPL108WYPL108W 507 nt8.73□□□□□ -1.01
VPS3P23643 RPD3YNL330C 1302 nt8.73□□□□□ -1.01
VPS3P23643 SAN1YDR143C 1833 nt8.73□□□□□ -1.01
VPS3P23643 ODC1YPL134C 933 nt8.72□□□□□ -1.01
VPS3P23643 RIM2YBR192W 1134 nt8.72□□□□□ -1.01
VPS3P23643 MRS6YOR370C 1812 nt8.72□□□□□ -1.01
VPS3P23643 KRR1YCL059C 951 nt8.7□□□□□ -1.02
VPS3P23643 YHR218WYHR218W 1812 nt8.69□□□□□ -1.02
VPS3P23643 RSM7YJR113C 744 nt8.69□□□□□ -1.02
VPS3P23643 YOR343CYOR343C 327 nt8.69□□□□□ -1.02
VPS3P23643 FRA1YLL029W 2250 nt8.69□□□□□ -1.02
VPS3P23643 PAU21YOR394W 495 nt8.68□□□□□ -1.02
VPS3P23643 PAU22YPL282C 495 nt8.68□□□□□ -1.02
VPS3P23643 KGD2YDR148C 1392 nt8.67□□□□□ -1.02
VPS3P23643 YDR510C-AYDR510C-A 117 nt8.67□□□□□ -1.02
VPS3P23643 HRA1HRA1 564 nt8.66□□□□□ -1.02
VPS3P23643 GAS1YMR307W 1680 nt8.65□□□□□ -1.02
VPS3P23643 GRH1YDR517W 1119 nt8.65□□□□□ -1.02
VPS3P23643 SBP1YHL034C 885 nt8.65□□□□□ -1.02
VPS3P23643 YJL160CYJL160C 864 nt8.65□□□□□ -1.02
VPS3P23643 RPL12BYDR418W 498 nt8.64□□□□□ -1.03
VPS3P23643 CWP2YKL096W-A 279 nt8.64□□□□□ -1.03
VPS3P23643 PTC6YCR079W 1329 nt8.63□□□□□ -1.03
VPS3P23643 EMC3YKL207W 762 nt8.63□□□□□ -1.03
VPS3P23643 YMR166CYMR166C 1107 nt8.63□□□□□ -1.03
VPS3P23643 SSL2YIL143C 2532 nt8.62□□□□□ -1.03
VPS3P23643 YAL016C-AYAL016C-A 315 nt8.61□□□□□ -1.03
VPS3P23643 LSP1YPL004C 1026 nt8.61□□□□□ -1.03
VPS3P23643 YMR210WYMR210W 1350 nt8.61□□□□□ -1.03
VPS3P23643 MDM35YKL053C-A 261 nt8.6□□□□□ -1.03
VPS3P23643 YLR460CYLR460C 1131 nt8.6□□□□□ -1.03
VPS3P23643 YOR072WYOR072W 315 nt8.6□□□□□ -1.03
VPS3P23643 MRP1YDR347W 966 nt8.59□□□□□ -1.03
VPS3P23643 RPC31YNL151C 756 nt8.59□□□□□ -1.03
VPS3P23643 RRT14YIL127C 621 nt8.57□□□□□ -1.04
VPS3P23643 HXT10YFL011W 1641 nt8.57□□□□□ -1.04
VPS3P23643 CHS7YHR142W 951 nt8.54□□□□□ -1.04
VPS3P23643 CAK1YFL029C 1107 nt8.53□□□□□ -1.04
VPS3P23643 MFT1YML062C 1179 nt8.53□□□□□ -1.04
VPS3P23643 GGA2YHR108W 1758 nt8.53□□□□□ -1.04
VPS3P23643 GDH1YOR375C 1365 nt8.52□□□□□ -1.05
VPS3P23643 MTO1YGL236C 2010 nt8.52□□□□□ -1.05
VPS3P23643 PET18YCR020C 648 nt8.51□□□□□ -1.05
VPS3P23643 OCH1YGL038C 1443 nt8.51□□□□□ -1.05
VPS3P23643 YER156CYER156C 1017 nt8.5□□□□□ -1.05
VPS3P23643 NSG2YNL156C 900 nt8.5□□□□□ -1.05
VPS3P23643 OLA1YBR025C 1185 nt8.5□□□□□ -1.05
VPS3P23643 DPL1YDR294C 1770 nt8.5□□□□□ -1.05
VPS3P23643 YMR316C-BYMR316C-B 309 nt8.49□□□□□ -1.05
VPS3P23643 MET22YOL064C 1074 nt8.49□□□□□ -1.05
VPS3P23643 ADA2YDR448W 1305 nt8.49□□□□□ -1.05
VPS3P23643 YRF1-3YGR296W 5580 nt8.48□□□□□ -1.05
VPS3P23643 YRF1-6YNL339C 5580 nt8.48□□□□□ -1.05
VPS3P23643 YRF1-7YPL283C 5580 nt8.48□□□□□ -1.05
VPS3P23643 YOR268CYOR268C 399 nt8.48□□□□□ -1.05
VPS3P23643 YPR084WYPR084W 1371 nt8.48□□□□□ -1.05
VPS3P23643 NBA1YOL070C 1506 nt8.46□□□□□ -1.05
VPS3P23643 YIR035CYIR035C 765 nt8.46□□□□□ -1.06
VPS3P23643 TAD2YJL035C 753 nt8.46□□□□□ -1.06
VPS3P23643 THI3YDL080C 1830 nt8.45□□□□□ -1.06
Retrieved 100 of 7,029 protein–RNA pairs in 54.2 ms