Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TCRAP04437 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TCRAP04437 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TCRAP04437 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TCRAP04437 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TCRAP04437 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TCRAP04437 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TCRAP04437 AP002365.1-201ENST00000603448 772 ntBASIC19.67■□□□□ 0.74
TCRAP04437 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TCRAP04437 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.66■□□□□ 0.74
TCRAP04437 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TCRAP04437 BX255925.1-201ENST00000566954 1854 ntBASIC19.66■□□□□ 0.74
TCRAP04437 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TCRAP04437 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TCRAP04437 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TCRAP04437 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TCRAP04437 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TCRAP04437 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TCRAP04437 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC19.65■□□□□ 0.74
TCRAP04437 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
TCRAP04437 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC19.64■□□□□ 0.73
TCRAP04437 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TCRAP04437 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TCRAP04437 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TCRAP04437 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.63■□□□□ 0.73
TCRAP04437 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TCRAP04437 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TCRAP04437 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.62■□□□□ 0.73
TCRAP04437 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TCRAP04437 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TCRAP04437 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TCRAP04437 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.61■□□□□ 0.73
TCRAP04437 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TCRAP04437 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.6■□□□□ 0.73
TCRAP04437 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TCRAP04437 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TCRAP04437 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TCRAP04437 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
TCRAP04437 AL133380.1-201ENST00000506013 324 ntBASIC19.59■□□□□ 0.73
TCRAP04437 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TCRAP04437 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
TCRAP04437 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
TCRAP04437 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.58■□□□□ 0.72
TCRAP04437 AP004833.2-201ENST00000532228 1454 ntBASIC19.58■□□□□ 0.72
TCRAP04437 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TCRAP04437 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.58■□□□□ 0.72
TCRAP04437 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TCRAP04437 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCRAP04437 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC19.57■□□□□ 0.72
TCRAP04437 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC19.57■□□□□ 0.72
TCRAP04437 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCRAP04437 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCRAP04437 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCRAP04437 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCRAP04437 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.56■□□□□ 0.72
TCRAP04437 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCRAP04437 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCRAP04437 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TCRAP04437 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.55■□□□□ 0.72
TCRAP04437 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TCRAP04437 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TCRAP04437 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TCRAP04437 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TCRAP04437 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TCRAP04437 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TCRAP04437 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TCRAP04437 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
TCRAP04437 KLF16-203ENST00000592313 508 ntTSL 3 BASIC19.54■□□□□ 0.72
TCRAP04437 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TCRAP04437 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TCRAP04437 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.53■□□□□ 0.72
TCRAP04437 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.53■□□□□ 0.72
TCRAP04437 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TCRAP04437 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TCRAP04437 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TCRAP04437 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC19.52■□□□□ 0.72
TCRAP04437 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TCRAP04437 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TCRAP04437 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC19.52■□□□□ 0.71
TCRAP04437 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC19.51■□□□□ 0.71
TCRAP04437 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
TCRAP04437 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TCRAP04437 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TCRAP04437 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TCRAP04437 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TCRAP04437 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TCRAP04437 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TCRAP04437 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
TCRAP04437 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TCRAP04437 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TCRAP04437 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TCRAP04437 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
TCRAP04437 LINC01003-201ENST00000564834 1764 ntBASIC19.48■□□□□ 0.71
TCRAP04437 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC19.48■□□□□ 0.71
TCRAP04437 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TCRAP04437 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TCRAP04437 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TCRAP04437 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
TCRAP04437 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC19.47■□□□□ 0.71
TCRAP04437 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms