Protein–RNA interactions for Protein: Q07988

YLR040C, Cell wall protein YLR040C, yeastyeast

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YLR040CQ07988 YLR041WYLR041W 321 nt1.6□□□□□ -2.15
YLR040CQ07988 VPS15YBR097W 4365 nt1.6□□□□□ -2.15
YLR040CQ07988 COG6YNL041C 2520 nt1.6□□□□□ -2.15
YLR040CQ07988 YAL037C-AYAL037C-A 93 nt1.59□□□□□ -2.15
YLR040CQ07988 BIR1YJR089W 2865 nt1.58□□□□□ -2.16
YLR040CQ07988 NOP9YJL010C 2001 nt1.58□□□□□ -2.16
YLR040CQ07988 PEP1YBL017C 4740 nt1.57□□□□□ -2.16
YLR040CQ07988 YNL266WYNL266W 420 nt1.57□□□□□ -2.16
YLR040CQ07988 YBR072C-AYBR072C-A 162 nt1.57□□□□□ -2.16
YLR040CQ07988 snR190snR190 190 nt1.56□□□□□ -2.16
YLR040CQ07988 STO1YMR125W 2586 nt1.56□□□□□ -2.16
YLR040CQ07988 SAC3YDR159W 3906 nt1.56□□□□□ -2.16
YLR040CQ07988 YGR146C-AYGR146C-A 162 nt1.55□□□□□ -2.16
YLR040CQ07988 SEC1YDR164C 2175 nt1.55□□□□□ -2.16
YLR040CQ07988 SKI3YPR189W 4299 nt1.54□□□□□ -2.16
YLR040CQ07988 CFT1YDR301W 4074 nt1.54□□□□□ -2.16
YLR040CQ07988 WAR1YML076C 2835 nt1.53□□□□□ -2.16
YLR040CQ07988 snR62snR62 100 nt1.53□□□□□ -2.16
YLR040CQ07988 GEA2YEL022W 4380 nt1.53□□□□□ -2.16
YLR040CQ07988 KAP122YGL016W 3246 nt1.53□□□□□ -2.16
YLR040CQ07988 RPL26BYGR034W 384 nt1.53□□□□□ -2.16
YLR040CQ07988 SET3YKR029C 2256 nt1.53□□□□□ -2.16
YLR040CQ07988 CHS1YNL192W 3396 nt1.51□□□□□ -2.17
YLR040CQ07988 YOL083C-AYOL083C-A 141 nt1.51□□□□□ -2.17
YLR040CQ07988 MON2YNL297C 4911 nt1.5□□□□□ -2.17
YLR040CQ07988 MEC1YBR136W 7107 nt1.5□□□□□ -2.17
YLR040CQ07988 KCS1YDR017C 3153 nt1.49□□□□□ -2.17
YLR040CQ07988 APL3YBL037W 3078 nt1.48□□□□□ -2.17
YLR040CQ07988 BRR2YER172C 6492 nt1.47□□□□□ -2.17
YLR040CQ07988 RAD9YDR217C 3930 nt1.47□□□□□ -2.17
YLR040CQ07988 SXM1YDR395W 2835 nt1.47□□□□□ -2.17
YLR040CQ07988 IRA1YBR140C 9279 nt1.46□□□□□ -2.18
YLR040CQ07988 ASE1YOR058C 2658 nt1.46□□□□□ -2.18
YLR040CQ07988 SSK2YNR031C 4740 nt1.44□□□□□ -2.18
YLR040CQ07988 YBL071C-BYBL071C-B 99 nt1.44□□□□□ -2.18
YLR040CQ07988 YCS4YLR272C 3531 nt1.44□□□□□ -2.18
YLR040CQ07988 BEM3YPL115C 3387 nt1.43□□□□□ -2.18
YLR040CQ07988 YBR200W-AYBR200W-A 165 nt1.43□□□□□ -2.18
YLR040CQ07988 YBR196C-AYBR196C-A 150 nt1.42□□□□□ -2.18
YLR040CQ07988 PRP16YKR086W 3216 nt1.42□□□□□ -2.18
YLR040CQ07988 SWI4YER111C 3282 nt1.41□□□□□ -2.18
YLR040CQ07988 ROM2YLR371W 4071 nt1.41□□□□□ -2.18
YLR040CQ07988 MSH3YCR092C 3057 nt1.41□□□□□ -2.18
YLR040CQ07988 CCH1YGR217W 6120 nt1.41□□□□□ -2.18
YLR040CQ07988 YDL073WYDL073W 2955 nt1.4□□□□□ -2.19
YLR040CQ07988 SEC8YPR055W 3198 nt1.39□□□□□ -2.19
YLR040CQ07988 BST1YFL025C 3090 nt1.39□□□□□ -2.19
YLR040CQ07988 YDR034C-AYDR034C-A 177 nt1.39□□□□□ -2.19
YLR040CQ07988 SPC110YDR356W 2835 nt1.39□□□□□ -2.19
YLR040CQ07988 YBL100W-CYBL100W-C 120 nt1.38□□□□□ -2.19
YLR040CQ07988 NUP145YGL092W 3954 nt1.38□□□□□ -2.19
YLR040CQ07988 RPM2YML091C 3609 nt1.38□□□□□ -2.19
YLR040CQ07988 SEC3YER008C 4011 nt1.37□□□□□ -2.19
YLR040CQ07988 UBP3YER151C 2739 nt1.37□□□□□ -2.19
YLR040CQ07988 CAT8YMR280C 4302 nt1.37□□□□□ -2.19
YLR040CQ07988 RPS26AYGL189C 360 nt1.36□□□□□ -2.19
YLR040CQ07988 tN(GUU)QtN(GUU)Q 71 nt1.36□□□□□ -2.19
YLR040CQ07988 YOL164W-AYOL164W-A 183 nt1.36□□□□□ -2.19
YLR040CQ07988 NUP188YML103C 4968 nt1.36□□□□□ -2.19
YLR040CQ07988 SEC10YLR166C 2616 nt1.36□□□□□ -2.19
YLR040CQ07988 YNL284C-BYNL284C-B 5268 nt1.35□□□□□ -2.19
YLR040CQ07988 CDC25YLR310C 4770 nt1.35□□□□□ -2.19
YLR040CQ07988 AZF1YOR113W 2745 nt1.34□□□□□ -2.19
YLR040CQ07988 TRM732YMR259C 4263 nt1.34□□□□□ -2.19
YLR040CQ07988 PIK1YNL267W 3201 nt1.34□□□□□ -2.19
YLR040CQ07988 tQ(UUG)E2tQ(UUG)E2 72 nt1.34□□□□□ -2.19
YLR040CQ07988 YLR399W-AYLR399W-A 105 nt1.34□□□□□ -2.19
YLR040CQ07988 YGR240C-AYGR240C-A 201 nt1.33□□□□□ -2.2
YLR040CQ07988 NNF2YGR089W 2811 nt1.32□□□□□ -2.2
YLR040CQ07988 YPR160W-AYPR160W-A 81 nt1.32□□□□□ -2.2
YLR040CQ07988 PET127YOR017W 2403 nt1.3□□□□□ -2.2
YLR040CQ07988 YSP1YHR155W 3687 nt1.3□□□□□ -2.2
YLR040CQ07988 FYV8YGR196C 2454 nt1.3□□□□□ -2.2
YLR040CQ07988 YLR286W-AYLR286W-A 135 nt1.29□□□□□ -2.2
YLR040CQ07988 CDC39YCR093W 6327 nt1.29□□□□□ -2.2
YLR040CQ07988 HKR1YDR420W 5409 nt1.29□□□□□ -2.2
YLR040CQ07988 YGR130CYGR130C 2451 nt1.29□□□□□ -2.2
YLR040CQ07988 GLG1YKR058W 1851 nt1.29□□□□□ -2.2
YLR040CQ07988 EST2YLR318W 2655 nt1.28□□□□□ -2.2
YLR040CQ07988 snR47snR47 99 nt1.26□□□□□ -2.21
YLR040CQ07988 MSN5YDR335W 3675 nt1.25□□□□□ -2.21
YLR040CQ07988 ULP2YIL031W 3105 nt1.25□□□□□ -2.21
YLR040CQ07988 tD(GUC)QtD(GUC)Q 75 nt1.24□□□□□ -2.21
YLR040CQ07988 HUG1YML058W-A 207 nt1.24□□□□□ -2.21
YLR040CQ07988 IML1YJR138W 4755 nt1.21□□□□□ -2.22
YLR040CQ07988 LAA1YJL207C 6045 nt1.21□□□□□ -2.22
YLR040CQ07988 EST1YLR233C 2100 nt1.19□□□□□ -2.22
YLR040CQ07988 ORC3YLL004W 1851 nt1.19□□□□□ -2.22
YLR040CQ07988 CLU1YMR012W 3834 nt1.19□□□□□ -2.22
YLR040CQ07988 YLR299C-AYLR299C-A 93 nt1.18□□□□□ -2.22
YLR040CQ07988 snR69snR69 101 nt1.17□□□□□ -2.22
YLR040CQ07988 tH(GUG)E1tH(GUG)E1 72 nt1.17□□□□□ -2.22
YLR040CQ07988 tH(GUG)E2tH(GUG)E2 72 nt1.17□□□□□ -2.22
YLR040CQ07988 tH(GUG)G1tH(GUG)G1 72 nt1.17□□□□□ -2.22
YLR040CQ07988 tH(GUG)G2tH(GUG)G2 72 nt1.17□□□□□ -2.22
YLR040CQ07988 tH(GUG)HtH(GUG)H 72 nt1.17□□□□□ -2.22
YLR040CQ07988 tH(GUG)KtH(GUG)K 72 nt1.17□□□□□ -2.22
YLR040CQ07988 tH(GUG)MtH(GUG)M 72 nt1.17□□□□□ -2.22
YLR040CQ07988 CSE1YGL238W 2883 nt1.17□□□□□ -2.22
YLR040CQ07988 BUD3YCL014W 4911 nt1.16□□□□□ -2.22
Retrieved 100 of 7,029 protein–RNA pairs in 28.2 ms