Protein–RNA interactions for Protein: Q07478

SUB2, ATP-dependent RNA helicase SUB2, yeastyeast

Known RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB2Q07478 TRM732YMR259C 4263 nt1.88□□□□□ -2.11
SUB2Q07478 PMD1YER132C 5262 nt1.88□□□□□ -2.11
SUB2Q07478 FIG2YCR089W 4830 nt1.87□□□□□ -2.11
SUB2Q07478 OST4YDL232W 111 nt1.86□□□□□ -2.11
SUB2Q07478 YNL067W-BYNL067W-B 141 nt1.86□□□□□ -2.11
SUB2Q07478 ASE1YOR058C 2658 nt1.86□□□□□ -2.11
SUB2Q07478 CAT8YMR280C 4302 nt1.86□□□□□ -2.11
SUB2Q07478 MSH3YCR092C 3057 nt1.85□□□□□ -2.11
SUB2Q07478 MEC1YBR136W 7107 nt1.84□□□□□ -2.11
SUB2Q07478 YLR399W-AYLR399W-A 105 nt1.84□□□□□ -2.11
SUB2Q07478 RAD9YDR217C 3930 nt1.84□□□□□ -2.12
SUB2Q07478 tM(CAU)Q2tM(CAU)Q2 78 nt1.83□□□□□ -2.12
SUB2Q07478 QCR9YGR183C 201 nt1.83□□□□□ -2.12
SUB2Q07478 KAP120YPL125W 3099 nt1.82□□□□□ -2.12
SUB2Q07478 SOM1YEL059C-A 225 nt1.81□□□□□ -2.12
SUB2Q07478 STF2YGR008C 255 nt1.81□□□□□ -2.12
SUB2Q07478 YBR099CYBR099C 384 nt1.81□□□□□ -2.12
SUB2Q07478 YHR131W-AYHR131W-A 246 nt1.79□□□□□ -2.12
SUB2Q07478 HUG1YML058W-A 207 nt1.79□□□□□ -2.12
SUB2Q07478 PRP16YKR086W 3216 nt1.79□□□□□ -2.12
SUB2Q07478 BEM3YPL115C 3387 nt1.75□□□□□ -2.13
SUB2Q07478 CCH1YGR217W 6120 nt1.75□□□□□ -2.13
SUB2Q07478 YPR160W-AYPR160W-A 81 nt1.75□□□□□ -2.13
SUB2Q07478 CDC39YCR093W 6327 nt1.75□□□□□ -2.13
SUB2Q07478 VPS15YBR097W 4365 nt1.75□□□□□ -2.13
SUB2Q07478 YSP1YHR155W 3687 nt1.72□□□□□ -2.13
SUB2Q07478 YGR130CYGR130C 2451 nt1.72□□□□□ -2.13
SUB2Q07478 snR39BsnR39B 96 nt1.72□□□□□ -2.13
SUB2Q07478 YDR544CYDR544C 429 nt1.69□□□□□ -2.14
SUB2Q07478 YIL071W-AYIL071W-A 477 nt1.68□□□□□ -2.14
SUB2Q07478 SPC110YDR356W 2835 nt1.67□□□□□ -2.14
SUB2Q07478 IRA1YBR140C 9279 nt1.67□□□□□ -2.14
SUB2Q07478 COG6YNL041C 2520 nt1.66□□□□□ -2.14
SUB2Q07478 UBP3YER151C 2739 nt1.66□□□□□ -2.14
SUB2Q07478 LAA1YJL207C 6045 nt1.65□□□□□ -2.14
SUB2Q07478 YJL127W-AYJL127W-A 117 nt1.65□□□□□ -2.15
SUB2Q07478 YDL073WYDL073W 2955 nt1.64□□□□□ -2.15
SUB2Q07478 YGR146C-AYGR146C-A 162 nt1.64□□□□□ -2.15
SUB2Q07478 SSK2YNR031C 4740 nt1.64□□□□□ -2.15
SUB2Q07478 PMP2YEL017C-A 132 nt1.63□□□□□ -2.15
SUB2Q07478 tN(GUU)QtN(GUU)Q 71 nt1.62□□□□□ -2.15
SUB2Q07478 YDR210WYDR210W 228 nt1.61□□□□□ -2.15
SUB2Q07478 IML1YJR138W 4755 nt1.6□□□□□ -2.15
SUB2Q07478 ULP2YIL031W 3105 nt1.57□□□□□ -2.16
SUB2Q07478 tH(GUG)E1tH(GUG)E1 72 nt1.56□□□□□ -2.16
SUB2Q07478 tH(GUG)E2tH(GUG)E2 72 nt1.56□□□□□ -2.16
SUB2Q07478 tH(GUG)G1tH(GUG)G1 72 nt1.56□□□□□ -2.16
SUB2Q07478 tH(GUG)G2tH(GUG)G2 72 nt1.56□□□□□ -2.16
SUB2Q07478 tH(GUG)HtH(GUG)H 72 nt1.56□□□□□ -2.16
SUB2Q07478 tH(GUG)KtH(GUG)K 72 nt1.56□□□□□ -2.16
SUB2Q07478 tH(GUG)MtH(GUG)M 72 nt1.56□□□□□ -2.16
SUB2Q07478 GLG1YKR058W 1851 nt1.55□□□□□ -2.16
SUB2Q07478 snR61snR61 90 nt1.55□□□□□ -2.16
SUB2Q07478 YDR524C-AYDR524C-A 120 nt1.54□□□□□ -2.16
SUB2Q07478 PIK1YNL267W 3201 nt1.53□□□□□ -2.16
SUB2Q07478 TFB5YDR079C-A 219 nt1.53□□□□□ -2.16
SUB2Q07478 YMR326CYMR326C 309 nt1.52□□□□□ -2.17
SUB2Q07478 SEC1YDR164C 2175 nt1.52□□□□□ -2.17
SUB2Q07478 SPT7YBR081C 3999 nt1.51□□□□□ -2.17
SUB2Q07478 YNL103W-AYNL103W-A 90 nt1.51□□□□□ -2.17
SUB2Q07478 YBR072C-AYBR072C-A 162 nt1.51□□□□□ -2.17
SUB2Q07478 HKR1YDR420W 5409 nt1.5□□□□□ -2.17
SUB2Q07478 tV(UAC)BtV(UAC)B 74 nt1.5□□□□□ -2.17
SUB2Q07478 tV(UAC)DtV(UAC)D 74 nt1.5□□□□□ -2.17
SUB2Q07478 FYV8YGR196C 2454 nt1.49□□□□□ -2.17
SUB2Q07478 YBR178WYBR178W 375 nt1.49□□□□□ -2.17
SUB2Q07478 BIR1YJR089W 2865 nt1.48□□□□□ -2.17
SUB2Q07478 PET127YOR017W 2403 nt1.47□□□□□ -2.17
SUB2Q07478 SCC2YDR180W 4482 nt1.46□□□□□ -2.18
SUB2Q07478 LTE1YAL024C 4308 nt1.46□□□□□ -2.18
SUB2Q07478 NST1YNL091W 3723 nt1.44□□□□□ -2.18
SUB2Q07478 YNL266WYNL266W 420 nt1.42□□□□□ -2.18
SUB2Q07478 YBL109WYBL109W 336 nt1.42□□□□□ -2.18
SUB2Q07478 tQ(UUG)E2tQ(UUG)E2 72 nt1.41□□□□□ -2.18
SUB2Q07478 SBH1YER087C-B 249 nt1.4□□□□□ -2.19
SUB2Q07478 SIP4YJL089W 2490 nt1.4□□□□□ -2.19
SUB2Q07478 YLL006W-AYLL006W-A 177 nt1.38□□□□□ -2.19
SUB2Q07478 YHR217CYHR217C 462 nt1.37□□□□□ -2.19
SUB2Q07478 NNF2YGR089W 2811 nt1.35□□□□□ -2.19
SUB2Q07478 YPR117WYPR117W 7470 nt1.34□□□□□ -2.19
SUB2Q07478 PAU12YGR294W 363 nt1.34□□□□□ -2.19
SUB2Q07478 PAU24YBR301W 363 nt1.34□□□□□ -2.19
SUB2Q07478 YGL041C-BYGL041C-B 183 nt1.33□□□□□ -2.2
SUB2Q07478 RCO1YMR075W 2055 nt1.31□□□□□ -2.2
SUB2Q07478 CSE1YGL238W 2883 nt1.28□□□□□ -2.2
SUB2Q07478 YBR196C-AYBR196C-A 150 nt1.26□□□□□ -2.21
SUB2Q07478 SEC10YLR166C 2616 nt1.26□□□□□ -2.21
SUB2Q07478 YNL284C-BYNL284C-B 5268 nt1.24□□□□□ -2.21
SUB2Q07478 RKR1YMR247C 4689 nt1.23□□□□□ -2.21
SUB2Q07478 NIP1YMR309C 2439 nt1.2□□□□□ -2.22
SUB2Q07478 YAL037C-AYAL037C-A 93 nt1.2□□□□□ -2.22
SUB2Q07478 BUD3YCL014W 4911 nt1.2□□□□□ -2.22
SUB2Q07478 UTP20YBL004W 7482 nt1.18□□□□□ -2.22
SUB2Q07478 YJL077W-AYJL077W-A 87 nt1.17□□□□□ -2.22
SUB2Q07478 PET111YMR257C 2403 nt1.17□□□□□ -2.22
SUB2Q07478 MLP1YKR095W 5628 nt1.17□□□□□ -2.22
SUB2Q07478 BUL2YML111W 2763 nt1.16□□□□□ -2.22
SUB2Q07478 tF(GAA)BtF(GAA)B 73 nt1.16□□□□□ -2.22
SUB2Q07478 tF(GAA)FtF(GAA)F 73 nt1.16□□□□□ -2.22
SUB2Q07478 tF(GAA)GtF(GAA)G 73 nt1.16□□□□□ -2.22
Retrieved 100 of 7,029 protein–RNA pairs in 13 ms