Protein–RNA interactions for Protein: Q06623

HDA3, HDA1 complex subunit 3, yeastyeast

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA3Q06623 SMC4YLR086W 4257 nt2.11□□□□□ -2.07
HDA3Q06623 YBL071C-BYBL071C-B 99 nt2.1□□□□□ -2.07
HDA3Q06623 KAP122YGL016W 3246 nt2.1□□□□□ -2.07
HDA3Q06623 STO1YMR125W 2586 nt2.09□□□□□ -2.07
HDA3Q06623 UBP2YOR124C 3819 nt2.08□□□□□ -2.08
HDA3Q06623 FKS1YLR342W 5631 nt2.08□□□□□ -2.08
HDA3Q06623 SET3YKR029C 2256 nt2.07□□□□□ -2.08
HDA3Q06623 SPP41YDR464W 4308 nt2.07□□□□□ -2.08
HDA3Q06623 WAR1YML076C 2835 nt2.07□□□□□ -2.08
HDA3Q06623 MGA2YIR033W 3342 nt2.07□□□□□ -2.08
HDA3Q06623 YBL100W-CYBL100W-C 120 nt2.07□□□□□ -2.08
HDA3Q06623 YBR196C-AYBR196C-A 150 nt2.07□□□□□ -2.08
HDA3Q06623 YDR034C-AYDR034C-A 177 nt2.05□□□□□ -2.08
HDA3Q06623 NEO1YIL048W 3456 nt2.03□□□□□ -2.08
HDA3Q06623 ASE1YOR058C 2658 nt2.02□□□□□ -2.09
HDA3Q06623 RPS26AYGL189C 360 nt2.02□□□□□ -2.09
HDA3Q06623 YDL073WYDL073W 2955 nt2.01□□□□□ -2.09
HDA3Q06623 YLR419WYLR419W 4308 nt1.99□□□□□ -2.09
HDA3Q06623 SEC3YER008C 4011 nt1.99□□□□□ -2.09
HDA3Q06623 APL3YBL037W 3078 nt1.99□□□□□ -2.09
HDA3Q06623 YOL164W-AYOL164W-A 183 nt1.98□□□□□ -2.09
HDA3Q06623 BEM3YPL115C 3387 nt1.97□□□□□ -2.09
HDA3Q06623 YGR240C-AYGR240C-A 201 nt1.97□□□□□ -2.09
HDA3Q06623 SEC8YPR055W 3198 nt1.97□□□□□ -2.09
HDA3Q06623 SWI4YER111C 3282 nt1.97□□□□□ -2.09
HDA3Q06623 GEA2YEL022W 4380 nt1.96□□□□□ -2.1
HDA3Q06623 IRC20YLR247C 4671 nt1.95□□□□□ -2.1
HDA3Q06623 YBR200W-AYBR200W-A 165 nt1.95□□□□□ -2.1
HDA3Q06623 FAB1YFR019W 6837 nt1.95□□□□□ -2.1
HDA3Q06623 SEC10YLR166C 2616 nt1.95□□□□□ -2.1
HDA3Q06623 NUP145YGL092W 3954 nt1.93□□□□□ -2.1
HDA3Q06623 TMA7YLR262C-A 195 nt1.92□□□□□ -2.1
HDA3Q06623 PRP16YKR086W 3216 nt1.92□□□□□ -2.1
HDA3Q06623 SAC3YDR159W 3906 nt1.92□□□□□ -2.1
HDA3Q06623 BPH1YCR032W 6504 nt1.91□□□□□ -2.1
HDA3Q06623 AZF1YOR113W 2745 nt1.91□□□□□ -2.1
HDA3Q06623 YLR399W-AYLR399W-A 105 nt1.9□□□□□ -2.11
HDA3Q06623 UBP3YER151C 2739 nt1.89□□□□□ -2.11
HDA3Q06623 NNF2YGR089W 2811 nt1.89□□□□□ -2.11
HDA3Q06623 YSP1YHR155W 3687 nt1.88□□□□□ -2.11
HDA3Q06623 VPS15YBR097W 4365 nt1.87□□□□□ -2.11
HDA3Q06623 YLR286W-AYLR286W-A 135 nt1.86□□□□□ -2.11
HDA3Q06623 CLU1YMR012W 3834 nt1.86□□□□□ -2.11
HDA3Q06623 MON2YNL297C 4911 nt1.85□□□□□ -2.11
HDA3Q06623 GLG1YKR058W 1851 nt1.84□□□□□ -2.11
HDA3Q06623 YPR160W-AYPR160W-A 81 nt1.84□□□□□ -2.11
HDA3Q06623 MSN5YDR335W 3675 nt1.84□□□□□ -2.12
HDA3Q06623 ULP2YIL031W 3105 nt1.83□□□□□ -2.12
HDA3Q06623 tN(GUU)QtN(GUU)Q 71 nt1.83□□□□□ -2.12
HDA3Q06623 snR47snR47 99 nt1.83□□□□□ -2.12
HDA3Q06623 BST1YFL025C 3090 nt1.83□□□□□ -2.12
HDA3Q06623 PIK1YNL267W 3201 nt1.82□□□□□ -2.12
HDA3Q06623 snR53snR53 91 nt1.82□□□□□ -2.12
HDA3Q06623 DNF3YMR162C 4971 nt1.81□□□□□ -2.12
HDA3Q06623 PEP1YBL017C 4740 nt1.81□□□□□ -2.12
HDA3Q06623 YOR093CYOR093C 4947 nt1.81□□□□□ -2.12
HDA3Q06623 PKH3YDR466W 2697 nt1.8□□□□□ -2.12
HDA3Q06623 TRM732YMR259C 4263 nt1.79□□□□□ -2.12
HDA3Q06623 YMR272W-BYMR272W-B 108 nt1.79□□□□□ -2.12
HDA3Q06623 tD(GUC)QtD(GUC)Q 75 nt1.77□□□□□ -2.13
HDA3Q06623 ANS1YHR126C 480 nt1.77□□□□□ -2.13
HDA3Q06623 NUP188YML103C 4968 nt1.77□□□□□ -2.13
HDA3Q06623 PMD1YER132C 5262 nt1.76□□□□□ -2.13
HDA3Q06623 ORC3YLL004W 1851 nt1.75□□□□□ -2.13
HDA3Q06623 tT(UGU)HtT(UGU)H 72 nt1.75□□□□□ -2.13
HDA3Q06623 EST2YLR318W 2655 nt1.74□□□□□ -2.13
HDA3Q06623 FIG2YCR089W 4830 nt1.72□□□□□ -2.13
HDA3Q06623 snR64snR64 101 nt1.72□□□□□ -2.13
HDA3Q06623 YLR299C-AYLR299C-A 93 nt1.71□□□□□ -2.14
HDA3Q06623 NUP192YJL039C 5052 nt1.7□□□□□ -2.14
HDA3Q06623 CFT1YDR301W 4074 nt1.7□□□□□ -2.14
HDA3Q06623 SXM1YDR395W 2835 nt1.7□□□□□ -2.14
HDA3Q06623 snR69snR69 101 nt1.68□□□□□ -2.14
HDA3Q06623 EST1YLR233C 2100 nt1.68□□□□□ -2.14
HDA3Q06623 YMR247W-AYMR247W-A 144 nt1.68□□□□□ -2.14
HDA3Q06623 MSH3YCR092C 3057 nt1.65□□□□□ -2.14
HDA3Q06623 CSE1YGL238W 2883 nt1.65□□□□□ -2.15
HDA3Q06623 CDC39YCR093W 6327 nt1.64□□□□□ -2.15
HDA3Q06623 YDL159C-BYDL159C-B 177 nt1.64□□□□□ -2.15
HDA3Q06623 YPL060C-AYPL060C-A 3315 nt1.62□□□□□ -2.15
HDA3Q06623 HUG1YML058W-A 207 nt1.62□□□□□ -2.15
HDA3Q06623 RDS3YPR094W 324 nt1.62□□□□□ -2.15
HDA3Q06623 BRR2YER172C 6492 nt1.61□□□□□ -2.15
HDA3Q06623 PET127YOR017W 2403 nt1.61□□□□□ -2.15
HDA3Q06623 snR50snR50 90 nt1.6□□□□□ -2.15
HDA3Q06623 MEC1YBR136W 7107 nt1.6□□□□□ -2.15
HDA3Q06623 NST1YNL091W 3723 nt1.6□□□□□ -2.15
HDA3Q06623 YJL077W-AYJL077W-A 87 nt1.57□□□□□ -2.16
HDA3Q06623 YKL225WYKL225W 348 nt1.56□□□□□ -2.16
HDA3Q06623 YLL006W-AYLL006W-A 177 nt1.56□□□□□ -2.16
HDA3Q06623 IRA1YBR140C 9279 nt1.54□□□□□ -2.16
HDA3Q06623 YHR180C-BYHR180C-B 105 nt1.52□□□□□ -2.17
HDA3Q06623 YGR130CYGR130C 2451 nt1.52□□□□□ -2.17
HDA3Q06623 SIP4YJL089W 2490 nt1.52□□□□□ -2.17
HDA3Q06623 LAA1YJL207C 6045 nt1.52□□□□□ -2.17
HDA3Q06623 CCH1YGR217W 6120 nt1.51□□□□□ -2.17
HDA3Q06623 NIP1YMR309C 2439 nt1.5□□□□□ -2.17
HDA3Q06623 BUL2YML111W 2763 nt1.5□□□□□ -2.17
HDA3Q06623 YDR371C-AYDR371C-A 105 nt1.5□□□□□ -2.17
HDA3Q06623 YML054C-AYML054C-A 159 nt1.5□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 6.9 ms