Protein–RNA interactions for Protein: Q05166

ASM4, Nucleoporin ASM4, yeastyeast

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ASM4Q05166 VPS15YBR097W 4365 nt1.47□□□□□ -2.17
ASM4Q05166 STF2YGR008C 255 nt1.47□□□□□ -2.17
ASM4Q05166 YHR217CYHR217C 462 nt1.47□□□□□ -2.17
ASM4Q05166 YLR232WYLR232W 348 nt1.47□□□□□ -2.17
ASM4Q05166 EST2YLR318W 2655 nt1.47□□□□□ -2.17
ASM4Q05166 YLR419WYLR419W 4308 nt1.47□□□□□ -2.17
ASM4Q05166 GEA2YEL022W 4380 nt1.46□□□□□ -2.18
ASM4Q05166 tT(UGU)HtT(UGU)H 72 nt1.46□□□□□ -2.18
ASM4Q05166 RPM2YML091C 3609 nt1.45□□□□□ -2.18
ASM4Q05166 CFT1YDR301W 4074 nt1.45□□□□□ -2.18
ASM4Q05166 YLR041WYLR041W 321 nt1.45□□□□□ -2.18
ASM4Q05166 YMR247W-AYMR247W-A 144 nt1.44□□□□□ -2.18
ASM4Q05166 SXM1YDR395W 2835 nt1.44□□□□□ -2.18
ASM4Q05166 YHR131W-AYHR131W-A 246 nt1.43□□□□□ -2.18
ASM4Q05166 snR39BsnR39B 96 nt1.43□□□□□ -2.18
ASM4Q05166 MEC1YBR136W 7107 nt1.43□□□□□ -2.18
ASM4Q05166 MSN5YDR335W 3675 nt1.43□□□□□ -2.18
ASM4Q05166 SEC8YPR055W 3198 nt1.42□□□□□ -2.18
ASM4Q05166 BRR2YER172C 6492 nt1.41□□□□□ -2.18
ASM4Q05166 YDL247W-AYDL247W-A 75 nt1.4□□□□□ -2.19
ASM4Q05166 SBH1YER087C-B 249 nt1.4□□□□□ -2.19
ASM4Q05166 DNF3YMR162C 4971 nt1.4□□□□□ -2.19
ASM4Q05166 NUP157YER105C 4176 nt1.4□□□□□ -2.19
ASM4Q05166 NUP188YML103C 4968 nt1.39□□□□□ -2.19
ASM4Q05166 PMD1YER132C 5262 nt1.38□□□□□ -2.19
ASM4Q05166 YJL127W-AYJL127W-A 117 nt1.38□□□□□ -2.19
ASM4Q05166 PRP16YKR086W 3216 nt1.37□□□□□ -2.19
ASM4Q05166 RAD9YDR217C 3930 nt1.36□□□□□ -2.19
ASM4Q05166 YGL041C-BYGL041C-B 183 nt1.36□□□□□ -2.19
ASM4Q05166 YLR399W-AYLR399W-A 105 nt1.36□□□□□ -2.19
ASM4Q05166 BEM3YPL115C 3387 nt1.36□□□□□ -2.19
ASM4Q05166 ASE1YOR058C 2658 nt1.33□□□□□ -2.2
ASM4Q05166 YDR210WYDR210W 228 nt1.33□□□□□ -2.2
ASM4Q05166 YGR146C-AYGR146C-A 162 nt1.32□□□□□ -2.2
ASM4Q05166 KAP120YPL125W 3099 nt1.32□□□□□ -2.2
ASM4Q05166 COG6YNL041C 2520 nt1.31□□□□□ -2.2
ASM4Q05166 tQ(UUG)E2tQ(UUG)E2 72 nt1.3□□□□□ -2.2
ASM4Q05166 TRM732YMR259C 4263 nt1.29□□□□□ -2.2
ASM4Q05166 YSP1YHR155W 3687 nt1.29□□□□□ -2.2
ASM4Q05166 CCH1YGR217W 6120 nt1.29□□□□□ -2.2
ASM4Q05166 YDL073WYDL073W 2955 nt1.29□□□□□ -2.2
ASM4Q05166 PET127YOR017W 2403 nt1.28□□□□□ -2.2
ASM4Q05166 YPR160W-AYPR160W-A 81 nt1.28□□□□□ -2.2
ASM4Q05166 CAT8YMR280C 4302 nt1.28□□□□□ -2.2
ASM4Q05166 BIR1YJR089W 2865 nt1.27□□□□□ -2.21
ASM4Q05166 UBP3YER151C 2739 nt1.26□□□□□ -2.21
ASM4Q05166 FYV8YGR196C 2454 nt1.25□□□□□ -2.21
ASM4Q05166 SPC110YDR356W 2835 nt1.25□□□□□ -2.21
ASM4Q05166 YNL266WYNL266W 420 nt1.25□□□□□ -2.21
ASM4Q05166 SEC1YDR164C 2175 nt1.25□□□□□ -2.21
ASM4Q05166 PIK1YNL267W 3201 nt1.25□□□□□ -2.21
ASM4Q05166 RCO1YMR075W 2055 nt1.24□□□□□ -2.21
ASM4Q05166 tN(GUU)QtN(GUU)Q 71 nt1.23□□□□□ -2.21
ASM4Q05166 HKR1YDR420W 5409 nt1.23□□□□□ -2.21
ASM4Q05166 CDC39YCR093W 6327 nt1.22□□□□□ -2.21
ASM4Q05166 SSK2YNR031C 4740 nt1.21□□□□□ -2.22
ASM4Q05166 YNL284C-BYNL284C-B 5268 nt1.21□□□□□ -2.22
ASM4Q05166 YBR072C-AYBR072C-A 162 nt1.2□□□□□ -2.22
ASM4Q05166 ULP2YIL031W 3105 nt1.18□□□□□ -2.22
ASM4Q05166 LAA1YJL207C 6045 nt1.18□□□□□ -2.22
ASM4Q05166 GLG1YKR058W 1851 nt1.18□□□□□ -2.22
ASM4Q05166 YAL037C-AYAL037C-A 93 nt1.16□□□□□ -2.22
ASM4Q05166 NUP192YJL039C 5052 nt1.16□□□□□ -2.22
ASM4Q05166 snR81snR81 201 nt1.15□□□□□ -2.23
ASM4Q05166 BUD3YCL014W 4911 nt1.14□□□□□ -2.23
ASM4Q05166 YBR196C-AYBR196C-A 150 nt1.13□□□□□ -2.23
ASM4Q05166 MSH3YCR092C 3057 nt1.12□□□□□ -2.23
ASM4Q05166 tS(GCU)Q1tS(GCU)Q1 86 nt1.12□□□□□ -2.23
ASM4Q05166 YIL142C-AYIL142C-A 333 nt1.11□□□□□ -2.23
ASM4Q05166 SPT7YBR081C 3999 nt1.11□□□□□ -2.23
ASM4Q05166 YGR130CYGR130C 2451 nt1.11□□□□□ -2.23
ASM4Q05166 NNF2YGR089W 2811 nt1.08□□□□□ -2.24
ASM4Q05166 SEC10YLR166C 2616 nt1.08□□□□□ -2.24
ASM4Q05166 LTE1YAL024C 4308 nt1.08□□□□□ -2.24
ASM4Q05166 YOL083C-AYOL083C-A 141 nt1.07□□□□□ -2.24
ASM4Q05166 SCC2YDR180W 4482 nt1.07□□□□□ -2.24
ASM4Q05166 YJR029WYJR029W 5268 nt1.06□□□□□ -2.24
ASM4Q05166 YPR137C-BYPR137C-B 5268 nt1.06□□□□□ -2.24
ASM4Q05166 tH(GUG)E1tH(GUG)E1 72 nt1.05□□□□□ -2.24
ASM4Q05166 tH(GUG)E2tH(GUG)E2 72 nt1.05□□□□□ -2.24
ASM4Q05166 tH(GUG)G1tH(GUG)G1 72 nt1.05□□□□□ -2.24
ASM4Q05166 tH(GUG)G2tH(GUG)G2 72 nt1.05□□□□□ -2.24
ASM4Q05166 tH(GUG)HtH(GUG)H 72 nt1.05□□□□□ -2.24
ASM4Q05166 tH(GUG)KtH(GUG)K 72 nt1.05□□□□□ -2.24
ASM4Q05166 tH(GUG)MtH(GUG)M 72 nt1.05□□□□□ -2.24
ASM4Q05166 YLL006W-AYLL006W-A 177 nt1.05□□□□□ -2.24
ASM4Q05166 CSE1YGL238W 2883 nt1.04□□□□□ -2.24
ASM4Q05166 HUG1YML058W-A 207 nt1.04□□□□□ -2.24
ASM4Q05166 ANS1YHR126C 480 nt1.03□□□□□ -2.24
ASM4Q05166 YLL066W-BYLL066W-B 171 nt1.03□□□□□ -2.24
ASM4Q05166 NST1YNL091W 3723 nt1.01□□□□□ -2.25
ASM4Q05166 YBL100W-CYBL100W-C 120 nt1.01□□□□□ -2.25
ASM4Q05166 YPR117WYPR117W 7470 nt1.01□□□□□ -2.25
ASM4Q05166 VAM6YDL077C 3150 nt0.99□□□□□ -2.25
ASM4Q05166 snR62snR62 100 nt0.99□□□□□ -2.25
ASM4Q05166 tD(GUC)QtD(GUC)Q 75 nt0.99□□□□□ -2.25
ASM4Q05166 YBL071C-BYBL071C-B 99 nt0.99□□□□□ -2.25
ASM4Q05166 snR45snR45 172 nt0.99□□□□□ -2.25
ASM4Q05166 DOP1YDR141C 5097 nt0.98□□□□□ -2.25
ASM4Q05166 YLR286W-AYLR286W-A 135 nt0.97□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 65.8 ms