Protein–RNA interactions for Protein: Q01939

RPT6, 26S proteasome regulatory subunit 8 homolog, yeastyeast

Known RBP Predictions only

Length 405 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT6Q01939 QCR9YGR183C 201 nt0.79□□□□□ -2.28
RPT6Q01939 PAU12YGR294W 363 nt0.79□□□□□ -2.28
RPT6Q01939 snR49snR49 165 nt0.79□□□□□ -2.28
RPT6Q01939 YCR018C-AYCR018C-A 255 nt0.78□□□□□ -2.28
RPT6Q01939 snR80snR80 171 nt0.78□□□□□ -2.28
RPT6Q01939 YOR072W-BYOR072W-B 162 nt0.77□□□□□ -2.29
RPT6Q01939 tF(GAA)QtF(GAA)Q 75 nt0.76□□□□□ -2.29
RPT6Q01939 YLR282CYLR282C 342 nt0.75□□□□□ -2.29
RPT6Q01939 COY1YKL179C 2040 nt0.74□□□□□ -2.29
RPT6Q01939 snR55snR55 98 nt0.74□□□□□ -2.29
RPT6Q01939 COX5BYIL111W 456 nt0.74□□□□□ -2.29
RPT6Q01939 OST4YDL232W 111 nt0.73□□□□□ -2.29
RPT6Q01939 YGL188C-AYGL188C-A 141 nt0.73□□□□□ -2.29
RPT6Q01939 ABF2YMR072W 552 nt0.73□□□□□ -2.29
RPT6Q01939 YOR161W-AYOR161W-A 81 nt0.73□□□□□ -2.29
RPT6Q01939 YOR345CYOR345C 351 nt0.73□□□□□ -2.29
RPT6Q01939 YML002WYML002W 2214 nt0.73□□□□□ -2.29
RPT6Q01939 YIR030W-AYIR030W-A 384 nt0.72□□□□□ -2.29
RPT6Q01939 YLR041WYLR041W 321 nt0.72□□□□□ -2.29
RPT6Q01939 YOL155W-AYOL155W-A 135 nt0.72□□□□□ -2.29
RPT6Q01939 snR8snR8 190 nt0.71□□□□□ -2.3
RPT6Q01939 YIL134C-AYIL134C-A 204 nt0.71□□□□□ -2.3
RPT6Q01939 YBR131C-AYBR131C-A 90 nt0.71□□□□□ -2.3
RPT6Q01939 YDR366CYDR366C 399 nt0.7□□□□□ -2.3
RPT6Q01939 YGL123C-AYGL123C-A 231 nt0.7□□□□□ -2.3
RPT6Q01939 YKL100W-AYKL100W-A 90 nt0.7□□□□□ -2.3
RPT6Q01939 YOR302WYOR302W 78 nt0.7□□□□□ -2.3
RPT6Q01939 YPR159C-AYPR159C-A 102 nt0.7□□□□□ -2.3
RPT6Q01939 PRP42YDR235W 1635 nt0.69□□□□□ -2.3
RPT6Q01939 ULI1YFR026C 510 nt0.69□□□□□ -2.3
RPT6Q01939 YBR182C-AYBR182C-A 195 nt0.69□□□□□ -2.3
RPT6Q01939 YKU70YMR284W 1809 nt0.68□□□□□ -2.3
RPT6Q01939 YCR038W-AYCR038W-A 126 nt0.68□□□□□ -2.3
RPT6Q01939 YJL127W-AYJL127W-A 117 nt0.68□□□□□ -2.3
RPT6Q01939 BLI1YKL061W 342 nt0.68□□□□□ -2.3
RPT6Q01939 YKL145W-AYKL145W-A 93 nt0.68□□□□□ -2.3
RPT6Q01939 COX12YLR038C 252 nt0.67□□□□□ -2.3
RPT6Q01939 YER053C-AYER053C-A 114 nt0.66□□□□□ -2.3
RPT6Q01939 tN(GUU)QtN(GUU)Q 71 nt0.65□□□□□ -2.31
RPT6Q01939 YMR272W-AYMR272W-A 114 nt0.64□□□□□ -2.31
RPT6Q01939 YOL014WYOL014W 375 nt0.64□□□□□ -2.31
RPT6Q01939 MLP1YKR095W 5628 nt0.63□□□□□ -2.31
RPT6Q01939 RPM2YML091C 3609 nt0.62□□□□□ -2.31
RPT6Q01939 APQ12YIL040W 417 nt0.62□□□□□ -2.31
RPT6Q01939 FMP27YLR454W 7887 nt0.61□□□□□ -2.31
RPT6Q01939 ULP2YIL031W 3105 nt0.6□□□□□ -2.31
RPT6Q01939 YOR192C-BYOR192C-B 5313 nt0.6□□□□□ -2.31
RPT6Q01939 YNL097C-BYNL097C-B 123 nt0.59□□□□□ -2.31
RPT6Q01939 YEL014CYEL014C 306 nt0.58□□□□□ -2.32
RPT6Q01939 YHR131W-AYHR131W-A 246 nt0.58□□□□□ -2.32
RPT6Q01939 YIL002W-AYIL002W-A 210 nt0.58□□□□□ -2.32
RPT6Q01939 YMR158W-BYMR158W-B 321 nt0.58□□□□□ -2.32
RPT6Q01939 MLP2YIL149C 5040 nt0.58□□□□□ -2.32
RPT6Q01939 PET111YMR257C 2403 nt0.58□□□□□ -2.32
RPT6Q01939 UTP10YJL109C 5310 nt0.57□□□□□ -2.32
RPT6Q01939 BUL2YML111W 2763 nt0.54□□□□□ -2.32
RPT6Q01939 YJL182CYJL182C 318 nt0.53□□□□□ -2.32
RPT6Q01939 NNF2YGR089W 2811 nt0.53□□□□□ -2.32
RPT6Q01939 SNU13YEL026W 381 nt0.51□□□□□ -2.33
RPT6Q01939 TRS65YGR166W 1683 nt0.51□□□□□ -2.33
RPT6Q01939 UTP8YGR128C 2142 nt0.5□□□□□ -2.33
RPT6Q01939 PRP39YML046W 1890 nt0.5□□□□□ -2.33
RPT6Q01939 NIP1YMR309C 2439 nt0.49□□□□□ -2.33
RPT6Q01939 YDR544CYDR544C 429 nt0.49□□□□□ -2.33
RPT6Q01939 SBH1YER087C-B 249 nt0.49□□□□□ -2.33
RPT6Q01939 JLP2YMR132C 627 nt0.49□□□□□ -2.33
RPT6Q01939 snR52snR52 92 nt0.49□□□□□ -2.33
RPT6Q01939 ESP1YGR098C 4893 nt0.48□□□□□ -2.33
RPT6Q01939 AI1Q0050 2505 nt0.47□□□□□ -2.33
RPT6Q01939 TAH1YCR060W 336 nt0.47□□□□□ -2.33
RPT6Q01939 RPS26AYGL189C 360 nt0.47□□□□□ -2.33
RPT6Q01939 SPG3YDR504C 384 nt0.46□□□□□ -2.34
RPT6Q01939 YDR371C-AYDR371C-A 105 nt0.45□□□□□ -2.34
RPT6Q01939 YBL039C-AYBL039C-A 84 nt0.45□□□□□ -2.34
RPT6Q01939 YLR232WYLR232W 348 nt0.44□□□□□ -2.34
RPT6Q01939 ORC3YLL004W 1851 nt0.44□□□□□ -2.34
RPT6Q01939 YDR406W-AYDR406W-A 246 nt0.43□□□□□ -2.34
RPT6Q01939 YLL006W-AYLL006W-A 177 nt0.43□□□□□ -2.34
RPT6Q01939 snR46snR46 197 nt0.43□□□□□ -2.34
RPT6Q01939 YGL182CYGL182C 324 nt0.42□□□□□ -2.34
RPT6Q01939 YBR072C-AYBR072C-A 162 nt0.41□□□□□ -2.34
RPT6Q01939 YJL150WYJL150W 303 nt0.4□□□□□ -2.35
RPT6Q01939 YPL060C-AYPL060C-A 3315 nt0.39□□□□□ -2.35
RPT6Q01939 YBL100W-BYBL100W-B 5313 nt0.39□□□□□ -2.35
RPT6Q01939 SDH6YDR379C-A 240 nt0.39□□□□□ -2.35
RPT6Q01939 RCO1YMR075W 2055 nt0.39□□□□□ -2.35
RPT6Q01939 YMR046W-AYMR046W-A 129 nt0.38□□□□□ -2.35
RPT6Q01939 YOR381W-AYOR381W-A 168 nt0.38□□□□□ -2.35
RPT6Q01939 YLR342W-AYLR342W-A 174 nt0.36□□□□□ -2.35
RPT6Q01939 YEL073CYEL073C 324 nt0.35□□□□□ -2.35
RPT6Q01939 COG6YNL041C 2520 nt0.35□□□□□ -2.35
RPT6Q01939 GLG1YKR058W 1851 nt0.35□□□□□ -2.35
RPT6Q01939 YNL198CYNL198C 303 nt0.32□□□□□ -2.36
RPT6Q01939 YNL054W-BYNL054W-B 5250 nt0.32□□□□□ -2.36
RPT6Q01939 CSE1YGL238W 2883 nt0.31□□□□□ -2.36
RPT6Q01939 tM(CAU)Q1tM(CAU)Q1 76 nt0.31□□□□□ -2.36
RPT6Q01939 BIR1YJR089W 2865 nt0.3□□□□□ -2.36
RPT6Q01939 YOL013W-AYOL013W-A 192 nt0.3□□□□□ -2.36
RPT6Q01939 YOR186C-AYOR186C-A 210 nt0.3□□□□□ -2.36
RPT6Q01939 YOR314W-AYOR314W-A 111 nt0.3□□□□□ -2.36
Retrieved 100 of 7,029 protein–RNA pairs in 42.2 ms