Protein–RNA interactions for Protein: P53056

YGL260W, Putative UPF0377 protein YGL260W, yeastyeast

Predictions only

Length 76 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YGL260WP53056 TAH1YCR060W 336 nt1.22□□□□□ -2.21
YGL260WP53056 QCR9YGR183C 201 nt1.22□□□□□ -2.21
YGL260WP53056 YHR131W-AYHR131W-A 246 nt1.22□□□□□ -2.21
YGL260WP53056 YNL067W-BYNL067W-B 141 nt1.22□□□□□ -2.21
YGL260WP53056 SET3YKR029C 2256 nt1.22□□□□□ -2.21
YGL260WP53056 VPS15YBR097W 4365 nt1.22□□□□□ -2.21
YGL260WP53056 STO1YMR125W 2586 nt1.2□□□□□ -2.22
YGL260WP53056 COG6YNL041C 2520 nt1.2□□□□□ -2.22
YGL260WP53056 RCO1YMR075W 2055 nt1.19□□□□□ -2.22
YGL260WP53056 NOP9YJL010C 2001 nt1.19□□□□□ -2.22
YGL260WP53056 YKL100W-AYKL100W-A 90 nt1.19□□□□□ -2.22
YGL260WP53056 YLR041WYLR041W 321 nt1.19□□□□□ -2.22
YGL260WP53056 CDC25YLR310C 4770 nt1.19□□□□□ -2.22
YGL260WP53056 NUP145YGL092W 3954 nt1.18□□□□□ -2.22
YGL260WP53056 YML002WYML002W 2214 nt1.17□□□□□ -2.22
YGL260WP53056 IML1YJR138W 4755 nt1.17□□□□□ -2.22
YGL260WP53056 tV(UAC)BtV(UAC)B 74 nt1.17□□□□□ -2.22
YGL260WP53056 tV(UAC)DtV(UAC)D 74 nt1.17□□□□□ -2.22
YGL260WP53056 APL3YBL037W 3078 nt1.16□□□□□ -2.22
YGL260WP53056 TMA7YLR262C-A 195 nt1.16□□□□□ -2.22
YGL260WP53056 FYV10YIL097W 1551 nt1.16□□□□□ -2.22
YGL260WP53056 LAA1YJL207C 6045 nt1.16□□□□□ -2.22
YGL260WP53056 SEC21YNL287W 2808 nt1.16□□□□□ -2.22
YGL260WP53056 YGL041C-BYGL041C-B 183 nt1.15□□□□□ -2.23
YGL260WP53056 GEA2YEL022W 4380 nt1.15□□□□□ -2.23
YGL260WP53056 SWI4YER111C 3282 nt1.14□□□□□ -2.23
YGL260WP53056 HKR1YDR420W 5409 nt1.14□□□□□ -2.23
YGL260WP53056 WAR1YML076C 2835 nt1.14□□□□□ -2.23
YGL260WP53056 NUP188YML103C 4968 nt1.14□□□□□ -2.23
YGL260WP53056 SBH1YER087C-B 249 nt1.14□□□□□ -2.23
YGL260WP53056 snR190snR190 190 nt1.14□□□□□ -2.23
YGL260WP53056 SMC1YFL008W 3678 nt1.14□□□□□ -2.23
YGL260WP53056 SEC3YER008C 4011 nt1.13□□□□□ -2.23
YGL260WP53056 YDL247W-AYDL247W-A 75 nt1.13□□□□□ -2.23
YGL260WP53056 YDR210WYDR210W 228 nt1.13□□□□□ -2.23
YGL260WP53056 tM(CAU)Q2tM(CAU)Q2 78 nt1.12□□□□□ -2.23
YGL260WP53056 YLR232WYLR232W 348 nt1.12□□□□□ -2.23
YGL260WP53056 CDC39YCR093W 6327 nt1.12□□□□□ -2.23
YGL260WP53056 PKH3YDR466W 2697 nt1.12□□□□□ -2.23
YGL260WP53056 MEC1YBR136W 7107 nt1.11□□□□□ -2.23
YGL260WP53056 CCH1YGR217W 6120 nt1.11□□□□□ -2.23
YGL260WP53056 KAP120YPL125W 3099 nt1.1□□□□□ -2.23
YGL260WP53056 RPL26BYGR034W 384 nt1.1□□□□□ -2.23
YGL260WP53056 CLU1YMR012W 3834 nt1.1□□□□□ -2.23
YGL260WP53056 tF(GAA)BtF(GAA)B 73 nt1.09□□□□□ -2.23
YGL260WP53056 tF(GAA)FtF(GAA)F 73 nt1.09□□□□□ -2.23
YGL260WP53056 tF(GAA)GtF(GAA)G 73 nt1.09□□□□□ -2.23
YGL260WP53056 tF(GAA)H1tF(GAA)H1 73 nt1.09□□□□□ -2.23
YGL260WP53056 tF(GAA)H2tF(GAA)H2 73 nt1.09□□□□□ -2.23
YGL260WP53056 tF(GAA)MtF(GAA)M 73 nt1.09□□□□□ -2.23
YGL260WP53056 tF(GAA)P1tF(GAA)P1 73 nt1.09□□□□□ -2.23
YGL260WP53056 tF(GAA)P2tF(GAA)P2 73 nt1.09□□□□□ -2.23
YGL260WP53056 BST1YFL025C 3090 nt1.08□□□□□ -2.24
YGL260WP53056 SIP4YJL089W 2490 nt1.08□□□□□ -2.24
YGL260WP53056 YDL073WYDL073W 2955 nt1.08□□□□□ -2.24
YGL260WP53056 YBR200W-AYBR200W-A 165 nt1.08□□□□□ -2.24
YGL260WP53056 SEC1YDR164C 2175 nt1.08□□□□□ -2.24
YGL260WP53056 RAD9YDR217C 3930 nt1.07□□□□□ -2.24
YGL260WP53056 YJL127W-AYJL127W-A 117 nt1.06□□□□□ -2.24
YGL260WP53056 PIK1YNL267W 3201 nt1.06□□□□□ -2.24
YGL260WP53056 EST2YLR318W 2655 nt1.04□□□□□ -2.24
YGL260WP53056 tS(GCU)Q1tS(GCU)Q1 86 nt1.04□□□□□ -2.24
YGL260WP53056 AZF1YOR113W 2745 nt1.03□□□□□ -2.24
YGL260WP53056 BIR1YJR089W 2865 nt1.03□□□□□ -2.24
YGL260WP53056 snR81snR81 201 nt1.03□□□□□ -2.24
YGL260WP53056 tN(GUU)QtN(GUU)Q 71 nt1.03□□□□□ -2.24
YGL260WP53056 PRP16YKR086W 3216 nt1.02□□□□□ -2.25
YGL260WP53056 YGR146C-AYGR146C-A 162 nt1.02□□□□□ -2.25
YGL260WP53056 tQ(UUG)E2tQ(UUG)E2 72 nt1.02□□□□□ -2.25
YGL260WP53056 YNL266WYNL266W 420 nt1.02□□□□□ -2.25
YGL260WP53056 YPR160W-AYPR160W-A 81 nt1□□□□□ -2.25
YGL260WP53056 SEC8YPR055W 3198 nt1□□□□□ -2.25
YGL260WP53056 FYV8YGR196C 2454 nt1□□□□□ -2.25
YGL260WP53056 ROM2YLR371W 4071 nt1□□□□□ -2.25
YGL260WP53056 YBR072C-AYBR072C-A 162 nt0.99□□□□□ -2.25
YGL260WP53056 YIL142C-AYIL142C-A 333 nt0.98□□□□□ -2.25
YGL260WP53056 NNF2YGR089W 2811 nt0.98□□□□□ -2.25
YGL260WP53056 MSN5YDR335W 3675 nt0.97□□□□□ -2.25
YGL260WP53056 YLR399W-AYLR399W-A 105 nt0.97□□□□□ -2.25
YGL260WP53056 RPM2YML091C 3609 nt0.97□□□□□ -2.25
YGL260WP53056 SPC110YDR356W 2835 nt0.96□□□□□ -2.26
YGL260WP53056 tT(UGU)HtT(UGU)H 72 nt0.96□□□□□ -2.26
YGL260WP53056 MYO1YHR023W 5787 nt0.96□□□□□ -2.26
YGL260WP53056 SAC3YDR159W 3906 nt0.96□□□□□ -2.26
YGL260WP53056 YAL037C-AYAL037C-A 93 nt0.95□□□□□ -2.26
YGL260WP53056 YOL014WYOL014W 375 nt0.94□□□□□ -2.26
YGL260WP53056 UBP3YER151C 2739 nt0.93□□□□□ -2.26
YGL260WP53056 BUD3YCL014W 4911 nt0.92□□□□□ -2.26
YGL260WP53056 YLL066W-BYLL066W-B 171 nt0.92□□□□□ -2.26
YGL260WP53056 YPL060C-AYPL060C-A 3315 nt0.91□□□□□ -2.26
YGL260WP53056 YSP1YHR155W 3687 nt0.91□□□□□ -2.26
YGL260WP53056 BEM3YPL115C 3387 nt0.91□□□□□ -2.26
YGL260WP53056 YOL083C-AYOL083C-A 141 nt0.91□□□□□ -2.26
YGL260WP53056 snR45snR45 172 nt0.91□□□□□ -2.26
YGL260WP53056 YBL071C-BYBL071C-B 99 nt0.9□□□□□ -2.27
YGL260WP53056 PET127YOR017W 2403 nt0.9□□□□□ -2.27
YGL260WP53056 SPT7YBR081C 3999 nt0.88□□□□□ -2.27
YGL260WP53056 YBR196C-AYBR196C-A 150 nt0.88□□□□□ -2.27
YGL260WP53056 NST1YNL091W 3723 nt0.88□□□□□ -2.27
YGL260WP53056 DOP1YDR141C 5097 nt0.87□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 55.1 ms