Protein–RNA interactions for Protein: P53046

ROM1, RHO1 GDP-GTP exchange protein 1, yeastyeast

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ROM1P53046 YNL266WYNL266W 420 nt1.98□□□□□ -2.09
ROM1P53046 snR81snR81 201 nt1.97□□□□□ -2.09
ROM1P53046 YLL066W-BYLL066W-B 171 nt1.97□□□□□ -2.09
ROM1P53046 YBR200W-AYBR200W-A 165 nt1.97□□□□□ -2.09
ROM1P53046 SWI4YER111C 3282 nt1.97□□□□□ -2.09
ROM1P53046 YMR045CYMR045C 5268 nt1.97□□□□□ -2.09
ROM1P53046 COG6YNL041C 2520 nt1.96□□□□□ -2.09
ROM1P53046 SEC1YDR164C 2175 nt1.96□□□□□ -2.1
ROM1P53046 YAL037C-AYAL037C-A 93 nt1.96□□□□□ -2.1
ROM1P53046 NEO1YIL048W 3456 nt1.96□□□□□ -2.1
ROM1P53046 NUP145YGL092W 3954 nt1.95□□□□□ -2.1
ROM1P53046 NUP157YER105C 4176 nt1.95□□□□□ -2.1
ROM1P53046 GEA2YEL022W 4380 nt1.95□□□□□ -2.1
ROM1P53046 BPH1YCR032W 6504 nt1.95□□□□□ -2.1
ROM1P53046 SXM1YDR395W 2835 nt1.94□□□□□ -2.1
ROM1P53046 HUG1YML058W-A 207 nt1.94□□□□□ -2.1
ROM1P53046 YBR072C-AYBR072C-A 162 nt1.94□□□□□ -2.1
ROM1P53046 SEC3YER008C 4011 nt1.92□□□□□ -2.1
ROM1P53046 SEC8YPR055W 3198 nt1.92□□□□□ -2.1
ROM1P53046 BEM3YPL115C 3387 nt1.92□□□□□ -2.1
ROM1P53046 YLR419WYLR419W 4308 nt1.91□□□□□ -2.1
ROM1P53046 BST1YFL025C 3090 nt1.91□□□□□ -2.1
ROM1P53046 snR45snR45 172 nt1.9□□□□□ -2.11
ROM1P53046 PKH3YDR466W 2697 nt1.9□□□□□ -2.11
ROM1P53046 CLU1YMR012W 3834 nt1.89□□□□□ -2.11
ROM1P53046 ASE1YOR058C 2658 nt1.89□□□□□ -2.11
ROM1P53046 PRP16YKR086W 3216 nt1.89□□□□□ -2.11
ROM1P53046 MON2YNL297C 4911 nt1.88□□□□□ -2.11
ROM1P53046 YHR214C-BYHR214C-B 5382 nt1.86□□□□□ -2.11
ROM1P53046 AZF1YOR113W 2745 nt1.86□□□□□ -2.11
ROM1P53046 YLR399W-AYLR399W-A 105 nt1.85□□□□□ -2.11
ROM1P53046 YOR093CYOR093C 4947 nt1.84□□□□□ -2.12
ROM1P53046 MSN5YDR335W 3675 nt1.84□□□□□ -2.12
ROM1P53046 YDL073WYDL073W 2955 nt1.83□□□□□ -2.12
ROM1P53046 FAB1YFR019W 6837 nt1.83□□□□□ -2.12
ROM1P53046 PMD1YER132C 5262 nt1.83□□□□□ -2.12
ROM1P53046 IRC20YLR247C 4671 nt1.82□□□□□ -2.12
ROM1P53046 snR62snR62 100 nt1.82□□□□□ -2.12
ROM1P53046 YSP1YHR155W 3687 nt1.79□□□□□ -2.12
ROM1P53046 EST2YLR318W 2655 nt1.79□□□□□ -2.12
ROM1P53046 YOL083C-AYOL083C-A 141 nt1.79□□□□□ -2.12
ROM1P53046 NUP188YML103C 4968 nt1.78□□□□□ -2.12
ROM1P53046 YBR196C-AYBR196C-A 150 nt1.78□□□□□ -2.12
ROM1P53046 NUP192YJL039C 5052 nt1.77□□□□□ -2.13
ROM1P53046 PEP1YBL017C 4740 nt1.77□□□□□ -2.13
ROM1P53046 YPR160W-AYPR160W-A 81 nt1.77□□□□□ -2.13
ROM1P53046 FIG2YCR089W 4830 nt1.77□□□□□ -2.13
ROM1P53046 tT(UGU)HtT(UGU)H 72 nt1.76□□□□□ -2.13
ROM1P53046 SSK2YNR031C 4740 nt1.75□□□□□ -2.13
ROM1P53046 UBP3YER151C 2739 nt1.75□□□□□ -2.13
ROM1P53046 VPS15YBR097W 4365 nt1.73□□□□□ -2.13
ROM1P53046 tN(GUU)QtN(GUU)Q 71 nt1.73□□□□□ -2.13
ROM1P53046 YMR247W-AYMR247W-A 144 nt1.73□□□□□ -2.13
ROM1P53046 GLG1YKR058W 1851 nt1.73□□□□□ -2.13
ROM1P53046 TRM732YMR259C 4263 nt1.73□□□□□ -2.13
ROM1P53046 CFT1YDR301W 4074 nt1.72□□□□□ -2.13
ROM1P53046 YBL100W-CYBL100W-C 120 nt1.72□□□□□ -2.13
ROM1P53046 ULP2YIL031W 3105 nt1.71□□□□□ -2.14
ROM1P53046 SEC10YLR166C 2616 nt1.71□□□□□ -2.14
ROM1P53046 YBL071C-BYBL071C-B 99 nt1.7□□□□□ -2.14
ROM1P53046 YMR272W-BYMR272W-B 108 nt1.69□□□□□ -2.14
ROM1P53046 IRA1YBR140C 9279 nt1.68□□□□□ -2.14
ROM1P53046 DNF3YMR162C 4971 nt1.67□□□□□ -2.14
ROM1P53046 PAU12YGR294W 363 nt1.67□□□□□ -2.14
ROM1P53046 PAU24YBR301W 363 nt1.67□□□□□ -2.14
ROM1P53046 NNF2YGR089W 2811 nt1.66□□□□□ -2.14
ROM1P53046 MEC1YBR136W 7107 nt1.65□□□□□ -2.15
ROM1P53046 RPS26AYGL189C 360 nt1.64□□□□□ -2.15
ROM1P53046 CDC39YCR093W 6327 nt1.63□□□□□ -2.15
ROM1P53046 YOL164W-AYOL164W-A 183 nt1.61□□□□□ -2.15
ROM1P53046 YDR034C-AYDR034C-A 177 nt1.6□□□□□ -2.15
ROM1P53046 SPC110YDR356W 2835 nt1.6□□□□□ -2.15
ROM1P53046 BRR2YER172C 6492 nt1.59□□□□□ -2.15
ROM1P53046 PIK1YNL267W 3201 nt1.58□□□□□ -2.16
ROM1P53046 YLR286W-AYLR286W-A 135 nt1.58□□□□□ -2.16
ROM1P53046 CCH1YGR217W 6120 nt1.57□□□□□ -2.16
ROM1P53046 YNL284C-BYNL284C-B 5268 nt1.57□□□□□ -2.16
ROM1P53046 YGR240C-AYGR240C-A 201 nt1.57□□□□□ -2.16
ROM1P53046 tD(GUC)QtD(GUC)Q 75 nt1.55□□□□□ -2.16
ROM1P53046 MSH3YCR092C 3057 nt1.55□□□□□ -2.16
ROM1P53046 YGR130CYGR130C 2451 nt1.52□□□□□ -2.17
ROM1P53046 CSE1YGL238W 2883 nt1.49□□□□□ -2.17
ROM1P53046 YLL006W-AYLL006W-A 177 nt1.49□□□□□ -2.17
ROM1P53046 FYV8YGR196C 2454 nt1.48□□□□□ -2.17
ROM1P53046 EST1YLR233C 2100 nt1.48□□□□□ -2.17
ROM1P53046 snR69snR69 101 nt1.47□□□□□ -2.17
ROM1P53046 YLR299C-AYLR299C-A 93 nt1.46□□□□□ -2.18
ROM1P53046 HKR1YDR420W 5409 nt1.46□□□□□ -2.18
ROM1P53046 CAT8YMR280C 4302 nt1.46□□□□□ -2.18
ROM1P53046 SPT7YBR081C 3999 nt1.46□□□□□ -2.18
ROM1P53046 snR47snR47 99 nt1.45□□□□□ -2.18
ROM1P53046 PET127YOR017W 2403 nt1.45□□□□□ -2.18
ROM1P53046 tQ(UUG)E2tQ(UUG)E2 72 nt1.44□□□□□ -2.18
ROM1P53046 LAA1YJL207C 6045 nt1.43□□□□□ -2.18
ROM1P53046 RDS3YPR094W 324 nt1.43□□□□□ -2.18
ROM1P53046 YDL159C-BYDL159C-B 177 nt1.42□□□□□ -2.18
ROM1P53046 YJL077W-AYJL077W-A 87 nt1.42□□□□□ -2.18
ROM1P53046 SIP4YJL089W 2490 nt1.39□□□□□ -2.19
ROM1P53046 NIP1YMR309C 2439 nt1.38□□□□□ -2.19
ROM1P53046 BUL2YML111W 2763 nt1.36□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms