Protein–RNA interactions for Protein: P47129

ACF4, Assembly-complementing factor 4, yeastyeast

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ACF4P47129 tM(CAU)Q2tM(CAU)Q2 78 nt1.86□□□□□ -2.11
ACF4P47129 VPS15YBR097W 4365 nt1.85□□□□□ -2.11
ACF4P47129 YLR232WYLR232W 348 nt1.85□□□□□ -2.11
ACF4P47129 ASE1YOR058C 2658 nt1.85□□□□□ -2.11
ACF4P47129 NUP188YML103C 4968 nt1.84□□□□□ -2.11
ACF4P47129 YHR131W-AYHR131W-A 246 nt1.84□□□□□ -2.11
ACF4P47129 AZF1YOR113W 2745 nt1.84□□□□□ -2.12
ACF4P47129 SEC3YER008C 4011 nt1.83□□□□□ -2.12
ACF4P47129 snR61snR61 90 nt1.83□□□□□ -2.12
ACF4P47129 CDC25YLR310C 4770 nt1.83□□□□□ -2.12
ACF4P47129 CFT1YDR301W 4074 nt1.82□□□□□ -2.12
ACF4P47129 CHS1YNL192W 3396 nt1.82□□□□□ -2.12
ACF4P47129 FIG2YCR089W 4830 nt1.82□□□□□ -2.12
ACF4P47129 EST2YLR318W 2655 nt1.8□□□□□ -2.12
ACF4P47129 STF2YGR008C 255 nt1.8□□□□□ -2.12
ACF4P47129 UBP2YOR124C 3819 nt1.8□□□□□ -2.12
ACF4P47129 ROM2YLR371W 4071 nt1.79□□□□□ -2.12
ACF4P47129 YHR217CYHR217C 462 nt1.77□□□□□ -2.13
ACF4P47129 RAD9YDR217C 3930 nt1.76□□□□□ -2.13
ACF4P47129 SXM1YDR395W 2835 nt1.76□□□□□ -2.13
ACF4P47129 NUP192YJL039C 5052 nt1.75□□□□□ -2.13
ACF4P47129 SEC8YPR055W 3198 nt1.73□□□□□ -2.13
ACF4P47129 BRR2YER172C 6492 nt1.73□□□□□ -2.13
ACF4P47129 YJL127W-AYJL127W-A 117 nt1.72□□□□□ -2.13
ACF4P47129 YDR210WYDR210W 228 nt1.71□□□□□ -2.14
ACF4P47129 CDC39YCR093W 6327 nt1.71□□□□□ -2.14
ACF4P47129 MSN5YDR335W 3675 nt1.69□□□□□ -2.14
ACF4P47129 PRP16YKR086W 3216 nt1.69□□□□□ -2.14
ACF4P47129 KAP120YPL125W 3099 nt1.69□□□□□ -2.14
ACF4P47129 COG6YNL041C 2520 nt1.69□□□□□ -2.14
ACF4P47129 SBH1YER087C-B 249 nt1.68□□□□□ -2.14
ACF4P47129 YLR399W-AYLR399W-A 105 nt1.68□□□□□ -2.14
ACF4P47129 CLU1YMR012W 3834 nt1.68□□□□□ -2.14
ACF4P47129 YGL041C-BYGL041C-B 183 nt1.67□□□□□ -2.14
ACF4P47129 YPR160W-AYPR160W-A 81 nt1.66□□□□□ -2.14
ACF4P47129 BEM3YPL115C 3387 nt1.65□□□□□ -2.14
ACF4P47129 RPM2YML091C 3609 nt1.65□□□□□ -2.14
ACF4P47129 YGR146C-AYGR146C-A 162 nt1.65□□□□□ -2.15
ACF4P47129 tN(GUU)QtN(GUU)Q 71 nt1.63□□□□□ -2.15
ACF4P47129 RCO1YMR075W 2055 nt1.63□□□□□ -2.15
ACF4P47129 CAT8YMR280C 4302 nt1.63□□□□□ -2.15
ACF4P47129 YDL247W-AYDL247W-A 75 nt1.62□□□□□ -2.15
ACF4P47129 SEC1YDR164C 2175 nt1.62□□□□□ -2.15
ACF4P47129 SPC110YDR356W 2835 nt1.62□□□□□ -2.15
ACF4P47129 YDL073WYDL073W 2955 nt1.6□□□□□ -2.15
ACF4P47129 SSK2YNR031C 4740 nt1.6□□□□□ -2.15
ACF4P47129 BIR1YJR089W 2865 nt1.6□□□□□ -2.15
ACF4P47129 IRA1YBR140C 9279 nt1.59□□□□□ -2.15
ACF4P47129 YSP1YHR155W 3687 nt1.58□□□□□ -2.16
ACF4P47129 MEC1YBR136W 7107 nt1.57□□□□□ -2.16
ACF4P47129 YNL266WYNL266W 420 nt1.57□□□□□ -2.16
ACF4P47129 PIK1YNL267W 3201 nt1.55□□□□□ -2.16
ACF4P47129 UBP3YER151C 2739 nt1.52□□□□□ -2.17
ACF4P47129 YBR072C-AYBR072C-A 162 nt1.5□□□□□ -2.17
ACF4P47129 YGR130CYGR130C 2451 nt1.49□□□□□ -2.17
ACF4P47129 tH(GUG)E1tH(GUG)E1 72 nt1.49□□□□□ -2.17
ACF4P47129 tH(GUG)E2tH(GUG)E2 72 nt1.49□□□□□ -2.17
ACF4P47129 tH(GUG)G1tH(GUG)G1 72 nt1.49□□□□□ -2.17
ACF4P47129 tH(GUG)G2tH(GUG)G2 72 nt1.49□□□□□ -2.17
ACF4P47129 tH(GUG)HtH(GUG)H 72 nt1.49□□□□□ -2.17
ACF4P47129 tH(GUG)KtH(GUG)K 72 nt1.49□□□□□ -2.17
ACF4P47129 tH(GUG)MtH(GUG)M 72 nt1.49□□□□□ -2.17
ACF4P47129 GLG1YKR058W 1851 nt1.48□□□□□ -2.17
ACF4P47129 CCH1YGR217W 6120 nt1.48□□□□□ -2.17
ACF4P47129 HKR1YDR420W 5409 nt1.48□□□□□ -2.17
ACF4P47129 YNL284C-BYNL284C-B 5268 nt1.47□□□□□ -2.17
ACF4P47129 SPT7YBR081C 3999 nt1.47□□□□□ -2.17
ACF4P47129 MSH3YCR092C 3057 nt1.46□□□□□ -2.18
ACF4P47129 ULP2YIL031W 3105 nt1.46□□□□□ -2.18
ACF4P47129 FYV8YGR196C 2454 nt1.45□□□□□ -2.18
ACF4P47129 snR81snR81 201 nt1.44□□□□□ -2.18
ACF4P47129 NNF2YGR089W 2811 nt1.44□□□□□ -2.18
ACF4P47129 LAA1YJL207C 6045 nt1.42□□□□□ -2.18
ACF4P47129 YAL037C-AYAL037C-A 93 nt1.42□□□□□ -2.18
ACF4P47129 HUG1YML058W-A 207 nt1.42□□□□□ -2.18
ACF4P47129 PET127YOR017W 2403 nt1.41□□□□□ -2.18
ACF4P47129 tS(GCU)Q1tS(GCU)Q1 86 nt1.39□□□□□ -2.19
ACF4P47129 YBR196C-AYBR196C-A 150 nt1.39□□□□□ -2.19
ACF4P47129 tQ(UUG)E2tQ(UUG)E2 72 nt1.38□□□□□ -2.19
ACF4P47129 SEC10YLR166C 2616 nt1.36□□□□□ -2.19
ACF4P47129 YLL006W-AYLL006W-A 177 nt1.33□□□□□ -2.2
ACF4P47129 YOL083C-AYOL083C-A 141 nt1.33□□□□□ -2.2
ACF4P47129 tV(UAC)BtV(UAC)B 74 nt1.32□□□□□ -2.2
ACF4P47129 tV(UAC)DtV(UAC)D 74 nt1.32□□□□□ -2.2
ACF4P47129 YIL142C-AYIL142C-A 333 nt1.31□□□□□ -2.2
ACF4P47129 IML1YJR138W 4755 nt1.31□□□□□ -2.2
ACF4P47129 NST1YNL091W 3723 nt1.29□□□□□ -2.2
ACF4P47129 RKR1YMR247C 4689 nt1.29□□□□□ -2.2
ACF4P47129 CSE1YGL238W 2883 nt1.27□□□□□ -2.21
ACF4P47129 SIP4YJL089W 2490 nt1.27□□□□□ -2.21
ACF4P47129 BUD3YCL014W 4911 nt1.26□□□□□ -2.21
ACF4P47129 SCC2YDR180W 4482 nt1.25□□□□□ -2.21
ACF4P47129 YBL071C-BYBL071C-B 99 nt1.25□□□□□ -2.21
ACF4P47129 YJR029WYJR029W 5268 nt1.23□□□□□ -2.21
ACF4P47129 YPR137C-BYPR137C-B 5268 nt1.23□□□□□ -2.21
ACF4P47129 snR69snR69 101 nt1.22□□□□□ -2.21
ACF4P47129 tD(GUC)QtD(GUC)Q 75 nt1.22□□□□□ -2.21
ACF4P47129 EST1YLR233C 2100 nt1.21□□□□□ -2.22
ACF4P47129 RPS26AYGL189C 360 nt1.21□□□□□ -2.22
ACF4P47129 YLL066W-BYLL066W-B 171 nt1.21□□□□□ -2.22
Retrieved 100 of 7,029 protein–RNA pairs in 14.1 ms