Protein–RNA interactions for Protein: P47017

LSM1, Sm-like protein LSm1, yeastyeast

Known RBP Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM1P47017 CSN9YDR179C 489 nt-1□□□□□ -2.57
LSM1P47017 YLR264C-AYLR264C-A 117 nt-1□□□□□ -2.57
LSM1P47017 snR33snR33 183 nt-1.01□□□□□ -2.57
LSM1P47017 RPS27BYHR021C 249 nt-1.02□□□□□ -2.57
LSM1P47017 YER053C-AYER053C-A 114 nt-1.06□□□□□ -2.58
LSM1P47017 YML100W-AYML100W-A 174 nt-1.06□□□□□ -2.58
LSM1P47017 CSE2YNR010W 450 nt-1.06□□□□□ -2.58
LSM1P47017 YMR193C-AYMR193C-A 387 nt-1.07□□□□□ -2.58
LSM1P47017 YGR069WYGR069W 336 nt-1.09□□□□□ -2.58
LSM1P47017 YER079WYER079W 633 nt-1.1□□□□□ -2.59
LSM1P47017 YIL115W-AYIL115W-A 372 nt-1.1□□□□□ -2.59
LSM1P47017 YNL122CYNL122C 348 nt-1.1□□□□□ -2.59
LSM1P47017 snR41snR41 95 nt-1.1□□□□□ -2.59
LSM1P47017 YLL019W-AYLL019W-A 93 nt-1.12□□□□□ -2.59
LSM1P47017 TOM22YNL131W 459 nt-1.12□□□□□ -2.59
LSM1P47017 PAU9YBL108C-A 129 nt-1.12□□□□□ -2.59
LSM1P47017 YJL197C-AYJL197C-A 282 nt-1.13□□□□□ -2.59
LSM1P47017 snR36snR36 182 nt-1.13□□□□□ -2.59
LSM1P47017 YPL060C-AYPL060C-A 3315 nt-1.14□□□□□ -2.59
LSM1P47017 APQ12YIL040W 417 nt-1.14□□□□□ -2.59
LSM1P47017 YIL002W-AYIL002W-A 210 nt-1.16□□□□□ -2.6
LSM1P47017 YLR434CYLR434C 384 nt-1.17□□□□□ -2.6
LSM1P47017 snR161snR161 161 nt-1.21□□□□□ -2.6
LSM1P47017 YDR544CYDR544C 429 nt-1.22□□□□□ -2.6
LSM1P47017 YJL182CYJL182C 318 nt-1.22□□□□□ -2.6
LSM1P47017 COG6YNL041C 2520 nt-1.23□□□□□ -2.61
LSM1P47017 HMRA1YCR097W 381 nt-1.26□□□□□ -2.61
LSM1P47017 YGL052WYGL052W 306 nt-1.26□□□□□ -2.61
LSM1P47017 YPR016W-AYPR016W-A 261 nt-1.26□□□□□ -2.61
LSM1P47017 YER137W-AYER137W-A 306 nt-1.27□□□□□ -2.61
LSM1P47017 TAH1YCR060W 336 nt-1.28□□□□□ -2.61
LSM1P47017 YDR048CYDR048C 315 nt-1.28□□□□□ -2.61
LSM1P47017 YNR025CYNR025C 360 nt-1.28□□□□□ -2.61
LSM1P47017 YOR072W-BYOR072W-B 162 nt-1.29□□□□□ -2.62
LSM1P47017 YCR038W-AYCR038W-A 126 nt-1.3□□□□□ -2.62
LSM1P47017 snR49snR49 165 nt-1.31□□□□□ -2.62
LSM1P47017 YOL013W-BYOL013W-B 291 nt-1.32□□□□□ -2.62
LSM1P47017 YJL077W-AYJL077W-A 87 nt-1.33□□□□□ -2.62
LSM1P47017 YBR223W-AYBR223W-A 120 nt-1.33□□□□□ -2.62
LSM1P47017 YPR010C-AYPR010C-A 219 nt-1.34□□□□□ -2.62
LSM1P47017 tR(UCU)Q1tR(UCU)Q1 73 nt-1.35□□□□□ -2.63
LSM1P47017 YAF9YNL107W 681 nt-1.36□□□□□ -2.63
LSM1P47017 snR60snR60 104 nt-1.37□□□□□ -2.63
LSM1P47017 YGL149WYGL149W 306 nt-1.38□□□□□ -2.63
LSM1P47017 tW(UCA)QtW(UCA)Q 74 nt-1.38□□□□□ -2.63
LSM1P47017 YLR154W-FYLR154W-F 141 nt-1.38□□□□□ -2.63
LSM1P47017 YOR015WYOR015W 360 nt-1.38□□□□□ -2.63
LSM1P47017 YOR170WYOR170W 306 nt-1.38□□□□□ -2.63
LSM1P47017 YOR314W-AYOR314W-A 111 nt-1.38□□□□□ -2.63
LSM1P47017 YDL158CYDL158C 309 nt-1.4□□□□□ -2.63
LSM1P47017 YMR001C-AYMR001C-A 231 nt-1.4□□□□□ -2.63
LSM1P47017 YGL182CYGL182C 324 nt-1.41□□□□□ -2.64
LSM1P47017 tQ(UUG)QtQ(UUG)Q 76 nt-1.41□□□□□ -2.64
LSM1P47017 YLR406C-AYLR406C-A 150 nt-1.41□□□□□ -2.64
LSM1P47017 YML099W-AYML099W-A 330 nt-1.41□□□□□ -2.64
LSM1P47017 YOR121CYOR121C 306 nt-1.41□□□□□ -2.64
LSM1P47017 snR78snR78 87 nt-1.42□□□□□ -2.64
LSM1P47017 YBL039C-AYBL039C-A 84 nt-1.44□□□□□ -2.64
LSM1P47017 YLR202CYLR202C 327 nt-1.46□□□□□ -2.64
LSM1P47017 ATP19YOL077W-A 207 nt-1.48□□□□□ -2.65
LSM1P47017 BIL1YOR304C-A 231 nt-1.49□□□□□ -2.65
LSM1P47017 YNL028WYNL028W 318 nt-1.5□□□□□ -2.65
LSM1P47017 YIL032CYIL032C 357 nt-1.51□□□□□ -2.65
LSM1P47017 YBR285WYBR285W 435 nt-1.51□□□□□ -2.65
LSM1P47017 YNL324WYNL324W 396 nt-1.52□□□□□ -2.65
LSM1P47017 YER090C-AYER090C-A 90 nt-1.53□□□□□ -2.65
LSM1P47017 YKL063CYKL063C 504 nt-1.53□□□□□ -2.65
LSM1P47017 snR69snR69 101 nt-1.54□□□□□ -2.66
LSM1P47017 tP(UGG)QtP(UGG)Q 72 nt-1.56□□□□□ -2.66
LSM1P47017 HTL1YCR020W-B 237 nt-1.57□□□□□ -2.66
LSM1P47017 YNL266WYNL266W 420 nt-1.57□□□□□ -2.66
LSM1P47017 snR74snR74 88 nt-1.58□□□□□ -2.66
LSM1P47017 JLP2YMR132C 627 nt-1.59□□□□□ -2.66
LSM1P47017 snR50snR50 90 nt-1.59□□□□□ -2.66
LSM1P47017 YDR102CYDR102C 333 nt-1.6□□□□□ -2.67
LSM1P47017 YLR120W-AYLR120W-A 102 nt-1.61□□□□□ -2.67
LSM1P47017 ATP6Q0085 780 nt-1.62□□□□□ -2.67
LSM1P47017 YFL032WYFL032W 321 nt-1.64□□□□□ -2.67
LSM1P47017 snR189snR189 189 nt-1.65□□□□□ -2.67
LSM1P47017 RDS3YPR094W 324 nt-1.66□□□□□ -2.68
LSM1P47017 YER097WYER097W 330 nt-1.7□□□□□ -2.68
LSM1P47017 YGR035CYGR035C 351 nt-1.7□□□□□ -2.68
LSM1P47017 YEL050W-AYEL050W-A 192 nt-1.71□□□□□ -2.68
LSM1P47017 YAL063C-AYAL063C-A 291 nt-1.71□□□□□ -2.68
LSM1P47017 PMP2YEL017C-A 132 nt-1.73□□□□□ -2.69
LSM1P47017 SKI7YOR076C 2244 nt-1.75□□□□□ -2.69
LSM1P47017 YMR172C-AYMR172C-A 384 nt-1.75□□□□□ -2.69
LSM1P47017 YAL068W-AYAL068W-A 255 nt-1.76□□□□□ -2.69
LSM1P47017 snR67snR67 82 nt-1.77□□□□□ -2.69
LSM1P47017 YGL041CYGL041C 204 nt-1.77□□□□□ -2.69
LSM1P47017 tM(CAU)Q2tM(CAU)Q2 78 nt-1.77□□□□□ -2.69
LSM1P47017 YGR146C-AYGR146C-A 162 nt-1.78□□□□□ -2.69
LSM1P47017 YOR381W-AYOR381W-A 168 nt-1.81□□□□□ -2.7
LSM1P47017 YFL019CYFL019C 354 nt-1.84□□□□□ -2.7
LSM1P47017 YNR077CYNR077C 255 nt-1.84□□□□□ -2.7
LSM1P47017 snR39BsnR39B 96 nt-1.84□□□□□ -2.7
LSM1P47017 YDR183C-AYDR183C-A 258 nt-1.85□□□□□ -2.71
LSM1P47017 YOR293C-AYOR293C-A 150 nt-1.86□□□□□ -2.71
LSM1P47017 tD(GUC)QtD(GUC)Q 75 nt-1.9□□□□□ -2.71
LSM1P47017 YEL014CYEL014C 306 nt-1.9□□□□□ -2.71
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms