Protein–RNA interactions for Protein: P40825

ALA1, Alanine--tRNA ligase, mitochondrial, yeastyeast

Known RBP Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ALA1P40825 TOR2YKL203C 7425 nt2.13□□□□□ -2.07
ALA1P40825 YLR419WYLR419W 4308 nt2.13□□□□□ -2.07
ALA1P40825 YGR240C-AYGR240C-A 201 nt2.12□□□□□ -2.07
ALA1P40825 YBL100W-CYBL100W-C 120 nt2.12□□□□□ -2.07
ALA1P40825 snR190snR190 190 nt2.12□□□□□ -2.07
ALA1P40825 UBP2YOR124C 3819 nt2.12□□□□□ -2.07
ALA1P40825 KAP122YGL016W 3246 nt2.12□□□□□ -2.07
ALA1P40825 SEC31YDL195W 3822 nt2.11□□□□□ -2.07
ALA1P40825 YBR196C-AYBR196C-A 150 nt2.11□□□□□ -2.07
ALA1P40825 SAC3YDR159W 3906 nt2.1□□□□□ -2.07
ALA1P40825 RPL26BYGR034W 384 nt2.1□□□□□ -2.07
ALA1P40825 MYO4YAL029C 4416 nt2.09□□□□□ -2.07
ALA1P40825 TMA7YLR262C-A 195 nt2.09□□□□□ -2.07
ALA1P40825 GLG1YKR058W 1851 nt2.08□□□□□ -2.08
ALA1P40825 YLR286W-AYLR286W-A 135 nt2.08□□□□□ -2.08
ALA1P40825 snR14snR14 160 nt2.08□□□□□ -2.08
ALA1P40825 UBP3YER151C 2739 nt2.08□□□□□ -2.08
ALA1P40825 SKI3YPR189W 4299 nt2.07□□□□□ -2.08
ALA1P40825 SEC3YER008C 4011 nt2.07□□□□□ -2.08
ALA1P40825 CHS1YNL192W 3396 nt2.06□□□□□ -2.08
ALA1P40825 AZF1YOR113W 2745 nt2.06□□□□□ -2.08
ALA1P40825 YMR045CYMR045C 5268 nt2.04□□□□□ -2.08
ALA1P40825 YHR214C-BYHR214C-B 5382 nt2.04□□□□□ -2.08
ALA1P40825 SMC1YFL008W 3678 nt2.04□□□□□ -2.08
ALA1P40825 NEO1YIL048W 3456 nt2.04□□□□□ -2.08
ALA1P40825 YPL060C-AYPL060C-A 3315 nt2.03□□□□□ -2.08
ALA1P40825 SEC10YLR166C 2616 nt2.03□□□□□ -2.09
ALA1P40825 NNF2YGR089W 2811 nt2.02□□□□□ -2.09
ALA1P40825 FKS1YLR342W 5631 nt2.02□□□□□ -2.09
ALA1P40825 FAB1YFR019W 6837 nt2.01□□□□□ -2.09
ALA1P40825 ORC3YLL004W 1851 nt2.01□□□□□ -2.09
ALA1P40825 STO1YMR125W 2586 nt2.01□□□□□ -2.09
ALA1P40825 PKH3YDR466W 2697 nt1.97□□□□□ -2.09
ALA1P40825 SMC4YLR086W 4257 nt1.97□□□□□ -2.09
ALA1P40825 MSH3YCR092C 3057 nt1.96□□□□□ -2.1
ALA1P40825 TRM732YMR259C 4263 nt1.96□□□□□ -2.1
ALA1P40825 snR64snR64 101 nt1.95□□□□□ -2.1
ALA1P40825 snR47snR47 99 nt1.95□□□□□ -2.1
ALA1P40825 YDR371C-AYDR371C-A 105 nt1.94□□□□□ -2.1
ALA1P40825 PRP16YKR086W 3216 nt1.94□□□□□ -2.1
ALA1P40825 APL3YBL037W 3078 nt1.93□□□□□ -2.1
ALA1P40825 SEC8YPR055W 3198 nt1.93□□□□□ -2.1
ALA1P40825 PIK1YNL267W 3201 nt1.93□□□□□ -2.1
ALA1P40825 SWI4YER111C 3282 nt1.92□□□□□ -2.1
ALA1P40825 YBR200W-AYBR200W-A 165 nt1.92□□□□□ -2.1
ALA1P40825 MSN5YDR335W 3675 nt1.92□□□□□ -2.1
ALA1P40825 IRC20YLR247C 4671 nt1.91□□□□□ -2.1
ALA1P40825 YLR399W-AYLR399W-A 105 nt1.88□□□□□ -2.11
ALA1P40825 ULP2YIL031W 3105 nt1.88□□□□□ -2.11
ALA1P40825 YMR272W-BYMR272W-B 108 nt1.87□□□□□ -2.11
ALA1P40825 tT(UGU)HtT(UGU)H 72 nt1.86□□□□□ -2.11
ALA1P40825 YSP1YHR155W 3687 nt1.86□□□□□ -2.11
ALA1P40825 PEP1YBL017C 4740 nt1.86□□□□□ -2.11
ALA1P40825 NST1YNL091W 3723 nt1.86□□□□□ -2.11
ALA1P40825 tN(GUU)QtN(GUU)Q 71 nt1.85□□□□□ -2.11
ALA1P40825 YMR247W-AYMR247W-A 144 nt1.85□□□□□ -2.11
ALA1P40825 YPR160W-AYPR160W-A 81 nt1.85□□□□□ -2.11
ALA1P40825 NUP145YGL092W 3954 nt1.85□□□□□ -2.11
ALA1P40825 MON2YNL297C 4911 nt1.84□□□□□ -2.11
ALA1P40825 CLU1YMR012W 3834 nt1.84□□□□□ -2.12
ALA1P40825 tD(GUC)QtD(GUC)Q 75 nt1.83□□□□□ -2.12
ALA1P40825 BEM3YPL115C 3387 nt1.82□□□□□ -2.12
ALA1P40825 GEA2YEL022W 4380 nt1.82□□□□□ -2.12
ALA1P40825 YOR093CYOR093C 4947 nt1.82□□□□□ -2.12
ALA1P40825 VPS15YBR097W 4365 nt1.8□□□□□ -2.12
ALA1P40825 ANS1YHR126C 480 nt1.8□□□□□ -2.12
ALA1P40825 BPH1YCR032W 6504 nt1.8□□□□□ -2.12
ALA1P40825 CDC39YCR093W 6327 nt1.79□□□□□ -2.12
ALA1P40825 IRA1YBR140C 9279 nt1.78□□□□□ -2.12
ALA1P40825 YBR109W-AYBR109W-A 225 nt1.78□□□□□ -2.12
ALA1P40825 DNF3YMR162C 4971 nt1.77□□□□□ -2.13
ALA1P40825 YLR299C-AYLR299C-A 93 nt1.77□□□□□ -2.13
ALA1P40825 snR50snR50 90 nt1.76□□□□□ -2.13
ALA1P40825 EST1YLR233C 2100 nt1.75□□□□□ -2.13
ALA1P40825 YKL225WYKL225W 348 nt1.75□□□□□ -2.13
ALA1P40825 BST1YFL025C 3090 nt1.75□□□□□ -2.13
ALA1P40825 snR69snR69 101 nt1.73□□□□□ -2.13
ALA1P40825 NUP188YML103C 4968 nt1.73□□□□□ -2.13
ALA1P40825 CFT1YDR301W 4074 nt1.71□□□□□ -2.14
ALA1P40825 NUP192YJL039C 5052 nt1.71□□□□□ -2.14
ALA1P40825 PET127YOR017W 2403 nt1.71□□□□□ -2.14
ALA1P40825 SXM1YDR395W 2835 nt1.7□□□□□ -2.14
ALA1P40825 MEC1YBR136W 7107 nt1.69□□□□□ -2.14
ALA1P40825 YDL159C-BYDL159C-B 177 nt1.69□□□□□ -2.14
ALA1P40825 CSE1YGL238W 2883 nt1.69□□□□□ -2.14
ALA1P40825 FIG2YCR089W 4830 nt1.68□□□□□ -2.14
ALA1P40825 PMD1YER132C 5262 nt1.68□□□□□ -2.14
ALA1P40825 EST2YLR318W 2655 nt1.67□□□□□ -2.14
ALA1P40825 RDS3YPR094W 324 nt1.66□□□□□ -2.14
ALA1P40825 YLR149C-AYLR149C-A 87 nt1.61□□□□□ -2.15
ALA1P40825 YML054C-AYML054C-A 159 nt1.6□□□□□ -2.15
ALA1P40825 snR38snR38 95 nt1.6□□□□□ -2.15
ALA1P40825 SPC110YDR356W 2835 nt1.59□□□□□ -2.16
ALA1P40825 YJL077W-AYJL077W-A 87 nt1.58□□□□□ -2.16
ALA1P40825 AI1Q0050 2505 nt1.58□□□□□ -2.16
ALA1P40825 LAA1YJL207C 6045 nt1.57□□□□□ -2.16
ALA1P40825 SSK2YNR031C 4740 nt1.57□□□□□ -2.16
ALA1P40825 YHR180C-BYHR180C-B 105 nt1.57□□□□□ -2.16
ALA1P40825 YKL096C-BYKL096C-B 150 nt1.57□□□□□ -2.16
ALA1P40825 RPL41AYDL184C 78 nt1.56□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 12 ms