Protein–RNA interactions for Protein: P40460

NDC80, Kinetochore protein NDC80, yeastyeast

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NDC80P40460 snR61snR61 90 nt1.51□□□□□ -2.17
NDC80P40460 snR39BsnR39B 96 nt1.51□□□□□ -2.17
NDC80P40460 SET3YKR029C 2256 nt1.51□□□□□ -2.17
NDC80P40460 STO1YMR125W 2586 nt1.51□□□□□ -2.17
NDC80P40460 TRM732YMR259C 4263 nt1.5□□□□□ -2.17
NDC80P40460 SXM1YDR395W 2835 nt1.5□□□□□ -2.17
NDC80P40460 NOP9YJL010C 2001 nt1.49□□□□□ -2.17
NDC80P40460 YHR131W-AYHR131W-A 246 nt1.49□□□□□ -2.17
NDC80P40460 YML002WYML002W 2214 nt1.49□□□□□ -2.17
NDC80P40460 PIK1YNL267W 3201 nt1.48□□□□□ -2.17
NDC80P40460 SEC21YNL287W 2808 nt1.46□□□□□ -2.18
NDC80P40460 YLR041WYLR041W 321 nt1.46□□□□□ -2.18
NDC80P40460 FYV10YIL097W 1551 nt1.46□□□□□ -2.18
NDC80P40460 LAA1YJL207C 6045 nt1.46□□□□□ -2.18
NDC80P40460 CDC25YLR310C 4770 nt1.46□□□□□ -2.18
NDC80P40460 ASE1YOR058C 2658 nt1.45□□□□□ -2.18
NDC80P40460 WAR1YML076C 2835 nt1.44□□□□□ -2.18
NDC80P40460 snR190snR190 190 nt1.44□□□□□ -2.18
NDC80P40460 GEA2YEL022W 4380 nt1.44□□□□□ -2.18
NDC80P40460 STF2YGR008C 255 nt1.43□□□□□ -2.18
NDC80P40460 APL3YBL037W 3078 nt1.43□□□□□ -2.18
NDC80P40460 SWI4YER111C 3282 nt1.42□□□□□ -2.18
NDC80P40460 MSH3YCR092C 3057 nt1.42□□□□□ -2.18
NDC80P40460 tM(CAU)Q2tM(CAU)Q2 78 nt1.42□□□□□ -2.18
NDC80P40460 SBH1YER087C-B 249 nt1.41□□□□□ -2.18
NDC80P40460 RPL26BYGR034W 384 nt1.41□□□□□ -2.18
NDC80P40460 YLR232WYLR232W 348 nt1.41□□□□□ -2.18
NDC80P40460 COG6YNL041C 2520 nt1.41□□□□□ -2.18
NDC80P40460 NUP188YML103C 4968 nt1.4□□□□□ -2.19
NDC80P40460 YDL247W-AYDL247W-A 75 nt1.4□□□□□ -2.19
NDC80P40460 YGL041C-BYGL041C-B 183 nt1.4□□□□□ -2.19
NDC80P40460 RCO1YMR075W 2055 nt1.39□□□□□ -2.19
NDC80P40460 SEC3YER008C 4011 nt1.39□□□□□ -2.19
NDC80P40460 BST1YFL025C 3090 nt1.38□□□□□ -2.19
NDC80P40460 YDR210WYDR210W 228 nt1.37□□□□□ -2.19
NDC80P40460 YBR200W-AYBR200W-A 165 nt1.37□□□□□ -2.19
NDC80P40460 YNL284C-BYNL284C-B 5268 nt1.36□□□□□ -2.19
NDC80P40460 KAP120YPL125W 3099 nt1.35□□□□□ -2.19
NDC80P40460 NUP145YGL092W 3954 nt1.35□□□□□ -2.19
NDC80P40460 YJL127W-AYJL127W-A 117 nt1.34□□□□□ -2.19
NDC80P40460 RAD9YDR217C 3930 nt1.34□□□□□ -2.2
NDC80P40460 AZF1YOR113W 2745 nt1.32□□□□□ -2.2
NDC80P40460 tH(GUG)E1tH(GUG)E1 72 nt1.32□□□□□ -2.2
NDC80P40460 tH(GUG)E2tH(GUG)E2 72 nt1.32□□□□□ -2.2
NDC80P40460 tH(GUG)G1tH(GUG)G1 72 nt1.32□□□□□ -2.2
NDC80P40460 tH(GUG)G2tH(GUG)G2 72 nt1.32□□□□□ -2.2
NDC80P40460 tH(GUG)HtH(GUG)H 72 nt1.32□□□□□ -2.2
NDC80P40460 tH(GUG)KtH(GUG)K 72 nt1.32□□□□□ -2.2
NDC80P40460 tH(GUG)MtH(GUG)M 72 nt1.32□□□□□ -2.2
NDC80P40460 EST2YLR318W 2655 nt1.32□□□□□ -2.2
NDC80P40460 CDC39YCR093W 6327 nt1.31□□□□□ -2.2
NDC80P40460 ROM2YLR371W 4071 nt1.3□□□□□ -2.2
NDC80P40460 SEC1YDR164C 2175 nt1.29□□□□□ -2.2
NDC80P40460 BIR1YJR089W 2865 nt1.28□□□□□ -2.2
NDC80P40460 SEC8YPR055W 3198 nt1.28□□□□□ -2.2
NDC80P40460 YGR146C-AYGR146C-A 162 nt1.28□□□□□ -2.2
NDC80P40460 YDL073WYDL073W 2955 nt1.26□□□□□ -2.21
NDC80P40460 VAM6YDL077C 3150 nt1.26□□□□□ -2.21
NDC80P40460 tN(GUU)QtN(GUU)Q 71 nt1.26□□□□□ -2.21
NDC80P40460 YNL266WYNL266W 420 nt1.25□□□□□ -2.21
NDC80P40460 PRP16YKR086W 3216 nt1.25□□□□□ -2.21
NDC80P40460 YGR130CYGR130C 2451 nt1.24□□□□□ -2.21
NDC80P40460 YPR160W-AYPR160W-A 81 nt1.24□□□□□ -2.21
NDC80P40460 RPM2YML091C 3609 nt1.23□□□□□ -2.21
NDC80P40460 snR81snR81 201 nt1.23□□□□□ -2.21
NDC80P40460 YLR399W-AYLR399W-A 105 nt1.23□□□□□ -2.21
NDC80P40460 MSN5YDR335W 3675 nt1.22□□□□□ -2.21
NDC80P40460 tS(GCU)Q1tS(GCU)Q1 86 nt1.22□□□□□ -2.21
NDC80P40460 YBR072C-AYBR072C-A 162 nt1.22□□□□□ -2.21
NDC80P40460 YJR029WYJR029W 5268 nt1.21□□□□□ -2.22
NDC80P40460 YPR137C-BYPR137C-B 5268 nt1.21□□□□□ -2.22
NDC80P40460 SPT7YBR081C 3999 nt1.21□□□□□ -2.22
NDC80P40460 BEM3YPL115C 3387 nt1.2□□□□□ -2.22
NDC80P40460 YIL142C-AYIL142C-A 333 nt1.19□□□□□ -2.22
NDC80P40460 IML1YJR138W 4755 nt1.18□□□□□ -2.22
NDC80P40460 YAL037C-AYAL037C-A 93 nt1.17□□□□□ -2.22
NDC80P40460 UBP3YER151C 2739 nt1.17□□□□□ -2.22
NDC80P40460 YSP1YHR155W 3687 nt1.16□□□□□ -2.22
NDC80P40460 NNF2YGR089W 2811 nt1.16□□□□□ -2.22
NDC80P40460 tV(UAC)BtV(UAC)B 74 nt1.15□□□□□ -2.23
NDC80P40460 tV(UAC)DtV(UAC)D 74 nt1.15□□□□□ -2.23
NDC80P40460 CLU1YMR012W 3834 nt1.14□□□□□ -2.23
NDC80P40460 SIP4YJL089W 2490 nt1.13□□□□□ -2.23
NDC80P40460 YLL066W-BYLL066W-B 171 nt1.11□□□□□ -2.23
NDC80P40460 YOL083C-AYOL083C-A 141 nt1.11□□□□□ -2.23
NDC80P40460 ULP2YIL031W 3105 nt1.11□□□□□ -2.23
NDC80P40460 GLG1YKR058W 1851 nt1.11□□□□□ -2.23
NDC80P40460 YBR196C-AYBR196C-A 150 nt1.1□□□□□ -2.23
NDC80P40460 NST1YNL091W 3723 nt1.1□□□□□ -2.23
NDC80P40460 BEM2YER155C 6504 nt1.1□□□□□ -2.23
NDC80P40460 SCC2YDR180W 4482 nt1.09□□□□□ -2.23
NDC80P40460 EMT1tM(CAU)D 73 nt1.09□□□□□ -2.23
NDC80P40460 EMT5tM(CAU)J1 73 nt1.09□□□□□ -2.23
NDC80P40460 EMT3tM(CAU)J2 73 nt1.09□□□□□ -2.23
NDC80P40460 EMT4tM(CAU)M 73 nt1.09□□□□□ -2.23
NDC80P40460 EMT2tM(CAU)O2 73 nt1.09□□□□□ -2.23
NDC80P40460 snR45snR45 172 nt1.09□□□□□ -2.23
NDC80P40460 HUG1YML058W-A 207 nt1.08□□□□□ -2.24
NDC80P40460 SEC10YLR166C 2616 nt1.08□□□□□ -2.24
NDC80P40460 YBL071C-BYBL071C-B 99 nt1.07□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms