Protein–RNA interactions for Protein: P39967

UBP9, Ubiquitin carboxyl-terminal hydrolase 9, yeastyeast

Predictions only

Length 754 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP9P39967 YDR365W-BYDR365W-B 5268 nt2.76□□□□□ -1.97
UBP9P39967 YER138CYER138C 5268 nt2.76□□□□□ -1.97
UBP9P39967 YER160CYER160C 5268 nt2.76□□□□□ -1.97
UBP9P39967 YGR038C-BYGR038C-B 5268 nt2.76□□□□□ -1.97
UBP9P39967 YGR161C-DYGR161C-D 5268 nt2.76□□□□□ -1.97
UBP9P39967 YJR027WYJR027W 5268 nt2.76□□□□□ -1.97
UBP9P39967 YLR157C-BYLR157C-B 5268 nt2.76□□□□□ -1.97
UBP9P39967 YML039WYML039W 5268 nt2.76□□□□□ -1.97
UBP9P39967 YML045WYML045W 5268 nt2.76□□□□□ -1.97
UBP9P39967 YMR050CYMR050C 5268 nt2.76□□□□□ -1.97
UBP9P39967 YOL103W-BYOL103W-B 5268 nt2.76□□□□□ -1.97
UBP9P39967 YBR012W-BYBR012W-B 5271 nt2.76□□□□□ -1.97
UBP9P39967 YOR142W-BYOR142W-B 5268 nt2.76□□□□□ -1.97
UBP9P39967 YPL257W-BYPL257W-B 5268 nt2.76□□□□□ -1.97
UBP9P39967 YPR158W-BYPR158W-B 5271 nt2.76□□□□□ -1.97
UBP9P39967 SRB8YCR081W 4284 nt2.76□□□□□ -1.97
UBP9P39967 SGS1YMR190C 4344 nt2.75□□□□□ -1.97
UBP9P39967 SYH1YPL105C 2550 nt2.74□□□□□ -1.97
UBP9P39967 YHR086W-AYHR086W-A 162 nt2.74□□□□□ -1.97
UBP9P39967 NUM1YDR150W 8247 nt2.73□□□□□ -1.97
UBP9P39967 IRC20YLR247C 4671 nt2.73□□□□□ -1.97
UBP9P39967 SOV1YMR066W 2697 nt2.73□□□□□ -1.97
UBP9P39967 PDR11YIL013C 4236 nt2.73□□□□□ -1.97
UBP9P39967 UTP21YLR409C 2820 nt2.73□□□□□ -1.97
UBP9P39967 IRE1YHR079C 3348 nt2.73□□□□□ -1.97
UBP9P39967 tN(GUU)QtN(GUU)Q 71 nt2.73□□□□□ -1.97
UBP9P39967 YLR419WYLR419W 4308 nt2.73□□□□□ -1.97
UBP9P39967 YJL052C-AYJL052C-A 120 nt2.72□□□□□ -1.97
UBP9P39967 YEF3YLR249W 3135 nt2.71□□□□□ -1.98
UBP9P39967 CTR9YOL145C 3234 nt2.7□□□□□ -1.98
UBP9P39967 YJL077W-AYJL077W-A 87 nt2.7□□□□□ -1.98
UBP9P39967 ESL2YKR096W 3588 nt2.7□□□□□ -1.98
UBP9P39967 YCS4YLR272C 3531 nt2.69□□□□□ -1.98
UBP9P39967 YOR343W-BYOR343W-B 5313 nt2.69□□□□□ -1.98
UBP9P39967 FLO11YIR019C 4104 nt2.68□□□□□ -1.98
UBP9P39967 APL3YBL037W 3078 nt2.67□□□□□ -1.98
UBP9P39967 tQ(UUG)QtQ(UUG)Q 76 nt2.67□□□□□ -1.98
UBP9P39967 HUG1YML058W-A 207 nt2.67□□□□□ -1.98
UBP9P39967 SAP1YER047C 2694 nt2.67□□□□□ -1.98
UBP9P39967 GEA1YJR031C 4227 nt2.66□□□□□ -1.98
UBP9P39967 SLH1YGR271W 5904 nt2.65□□□□□ -1.99
UBP9P39967 YER090C-AYER090C-A 90 nt2.64□□□□□ -1.99
UBP9P39967 FYV8YGR196C 2454 nt2.64□□□□□ -1.99
UBP9P39967 MET18YIL128W 3099 nt2.62□□□□□ -1.99
UBP9P39967 YGR130CYGR130C 2451 nt2.62□□□□□ -1.99
UBP9P39967 YSP1YHR155W 3687 nt2.6□□□□□ -1.99
UBP9P39967 NUP170YBL079W 4509 nt2.6□□□□□ -1.99
UBP9P39967 CAT8YMR280C 4302 nt2.6□□□□□ -1.99
UBP9P39967 HIR3YJR140C 4947 nt2.59□□□□□ -1.99
UBP9P39967 BNR1YIL159W 4128 nt2.59□□□□□ -2
UBP9P39967 DNF1YER166W 4716 nt2.59□□□□□ -2
UBP9P39967 RAV1YJR033C 4074 nt2.58□□□□□ -2
UBP9P39967 PRP16YKR086W 3216 nt2.58□□□□□ -2
UBP9P39967 STH1YIL126W 4080 nt2.58□□□□□ -2
UBP9P39967 CHC1YGL206C 4962 nt2.58□□□□□ -2
UBP9P39967 MYO1YHR023W 5787 nt2.57□□□□□ -2
UBP9P39967 YBL005W-BYBL005W-B 5268 nt2.56□□□□□ -2
UBP9P39967 snR77snR77 88 nt2.56□□□□□ -2
UBP9P39967 UBP2YOR124C 3819 nt2.56□□□□□ -2
UBP9P39967 ESC1YMR219W 4977 nt2.56□□□□□ -2
UBP9P39967 MSN5YDR335W 3675 nt2.55□□□□□ -2
UBP9P39967 MYO4YAL029C 4416 nt2.54□□□□□ -2
UBP9P39967 TRM732YMR259C 4263 nt2.53□□□□□ -2
UBP9P39967 snR67snR67 82 nt2.53□□□□□ -2
UBP9P39967 AMS1YGL156W 3252 nt2.53□□□□□ -2
UBP9P39967 TDA9YML081W 3756 nt2.53□□□□□ -2.01
UBP9P39967 SSD1YDR293C 3753 nt2.52□□□□□ -2.01
UBP9P39967 REV3YPL167C 4515 nt2.52□□□□□ -2.01
UBP9P39967 SPF1YEL031W 3648 nt2.5□□□□□ -2.01
UBP9P39967 GEA2YEL022W 4380 nt2.5□□□□□ -2.01
UBP9P39967 UBR1YGR184C 5853 nt2.5□□□□□ -2.01
UBP9P39967 TOR1YJR066W 7413 nt2.5□□□□□ -2.01
UBP9P39967 GIP3YPL137C 3831 nt2.49□□□□□ -2.01
UBP9P39967 NUP192YJL039C 5052 nt2.48□□□□□ -2.01
UBP9P39967 RAD50YNL250W 3939 nt2.47□□□□□ -2.01
UBP9P39967 UTP22YGR090W 3714 nt2.47□□□□□ -2.01
UBP9P39967 YLR399W-AYLR399W-A 105 nt2.46□□□□□ -2.02
UBP9P39967 VPS13YLL040C 9435 nt2.46□□□□□ -2.02
UBP9P39967 YOL098CYOL098C 3114 nt2.46□□□□□ -2.02
UBP9P39967 tC(GCA)QtC(GCA)Q 76 nt2.44□□□□□ -2.02
UBP9P39967 KAP122YGL016W 3246 nt2.44□□□□□ -2.02
UBP9P39967 TUS1YLR425W 3924 nt2.42□□□□□ -2.02
UBP9P39967 BNI1YNL271C 5862 nt2.42□□□□□ -2.02
UBP9P39967 BPH1YCR032W 6504 nt2.42□□□□□ -2.02
UBP9P39967 YHR180W-AYHR180W-A 183 nt2.41□□□□□ -2.02
UBP9P39967 TOP2YNL088W 4287 nt2.41□□□□□ -2.02
UBP9P39967 YLR422WYLR422W 5799 nt2.4□□□□□ -2.02
UBP9P39967 KRE33YNL132W 3171 nt2.39□□□□□ -2.03
UBP9P39967 INO80YGL150C 4470 nt2.38□□□□□ -2.03
UBP9P39967 PSD2YGR170W 3417 nt2.37□□□□□ -2.03
UBP9P39967 CLU1YMR012W 3834 nt2.36□□□□□ -2.03
UBP9P39967 SEC16YPL085W 6588 nt2.33□□□□□ -2.04
UBP9P39967 TRA1YHR099W 11235 nt2.33□□□□□ -2.04
UBP9P39967 IRA2YOL081W 9240 nt2.33□□□□□ -2.04
UBP9P39967 YOR316C-AYOR316C-A 210 nt2.32□□□□□ -2.04
UBP9P39967 YLL006W-AYLL006W-A 177 nt2.29□□□□□ -2.04
UBP9P39967 UBR2YLR024C 5619 nt2.28□□□□□ -2.04
UBP9P39967 CSF1YLR087C 8877 nt2.26□□□□□ -2.05
UBP9P39967 SMC4YLR086W 4257 nt2.26□□□□□ -2.05
UBP9P39967 VAM6YDL077C 3150 nt2.26□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 57.8 ms