Protein–RNA interactions for Protein: P39944

UBP5, Ubiquitin carboxyl-terminal hydrolase 5, yeastyeast

Predictions only

Length 805 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP5P39944 IRC20YLR247C 4671 nt1.9□□□□□ -2.11
UBP5P39944 TOR2YKL203C 7425 nt1.9□□□□□ -2.11
UBP5P39944 YDL159W-AYDL159W-A 132 nt1.89□□□□□ -2.11
UBP5P39944 HUG1YML058W-A 207 nt1.89□□□□□ -2.11
UBP5P39944 RPL26BYGR034W 384 nt1.88□□□□□ -2.11
UBP5P39944 CFT1YDR301W 4074 nt1.88□□□□□ -2.11
UBP5P39944 MET18YIL128W 3099 nt1.87□□□□□ -2.11
UBP5P39944 WAR1YML076C 2835 nt1.86□□□□□ -2.11
UBP5P39944 ALY2YJL084C 3141 nt1.86□□□□□ -2.11
UBP5P39944 HIR3YJR140C 4947 nt1.85□□□□□ -2.11
UBP5P39944 TRM3YDL112W 4311 nt1.85□□□□□ -2.11
UBP5P39944 CTR9YOL145C 3234 nt1.84□□□□□ -2.11
UBP5P39944 SPO24YPR036W-A 204 nt1.84□□□□□ -2.11
UBP5P39944 YBR200W-AYBR200W-A 165 nt1.84□□□□□ -2.11
UBP5P39944 YMR045CYMR045C 5268 nt1.84□□□□□ -2.11
UBP5P39944 NNF2YGR089W 2811 nt1.84□□□□□ -2.12
UBP5P39944 SFB2YNL049C 2631 nt1.84□□□□□ -2.12
UBP5P39944 YDL073WYDL073W 2955 nt1.83□□□□□ -2.12
UBP5P39944 MGA2YIR033W 3342 nt1.83□□□□□ -2.12
UBP5P39944 RPM2YML091C 3609 nt1.83□□□□□ -2.12
UBP5P39944 SXM1YDR395W 2835 nt1.82□□□□□ -2.12
UBP5P39944 SYH1YPL105C 2550 nt1.8□□□□□ -2.12
UBP5P39944 BEM3YPL115C 3387 nt1.8□□□□□ -2.12
UBP5P39944 IRE1YHR079C 3348 nt1.79□□□□□ -2.12
UBP5P39944 NUP192YJL039C 5052 nt1.79□□□□□ -2.12
UBP5P39944 MYO4YAL029C 4416 nt1.79□□□□□ -2.12
UBP5P39944 UBR2YLR024C 5619 nt1.79□□□□□ -2.12
UBP5P39944 YLR299C-AYLR299C-A 93 nt1.78□□□□□ -2.12
UBP5P39944 snR190snR190 190 nt1.78□□□□□ -2.12
UBP5P39944 YAR009CYAR009C 3591 nt1.78□□□□□ -2.13
UBP5P39944 SMC1YFL008W 3678 nt1.77□□□□□ -2.13
UBP5P39944 snR38snR38 95 nt1.77□□□□□ -2.13
UBP5P39944 YLR422WYLR422W 5799 nt1.76□□□□□ -2.13
UBP5P39944 ATG9YDL149W 2994 nt1.76□□□□□ -2.13
UBP5P39944 RAD9YDR217C 3930 nt1.75□□□□□ -2.13
UBP5P39944 tD(GUC)QtD(GUC)Q 75 nt1.75□□□□□ -2.13
UBP5P39944 YGR122C-AYGR122C-A 129 nt1.75□□□□□ -2.13
UBP5P39944 PMD1YER132C 5262 nt1.75□□□□□ -2.13
UBP5P39944 AI1Q0050 2505 nt1.74□□□□□ -2.13
UBP5P39944 NUT1YGL151W 3399 nt1.74□□□□□ -2.13
UBP5P39944 TMA7YLR262C-A 195 nt1.74□□□□□ -2.13
UBP5P39944 PET309YLR067C 2898 nt1.74□□□□□ -2.13
UBP5P39944 SKI7YOR076C 2244 nt1.74□□□□□ -2.13
UBP5P39944 PAN2YGL094C 3348 nt1.73□□□□□ -2.13
UBP5P39944 RAD50YNL250W 3939 nt1.73□□□□□ -2.13
UBP5P39944 YML054C-AYML054C-A 159 nt1.73□□□□□ -2.13
UBP5P39944 PKH3YDR466W 2697 nt1.73□□□□□ -2.13
UBP5P39944 snR14snR14 160 nt1.72□□□□□ -2.13
UBP5P39944 MSH6YDR097C 3729 nt1.71□□□□□ -2.14
UBP5P39944 RPL41AYDL184C 78 nt1.71□□□□□ -2.14
UBP5P39944 PET127YOR017W 2403 nt1.71□□□□□ -2.14
UBP5P39944 YHR214C-BYHR214C-B 5382 nt1.71□□□□□ -2.14
UBP5P39944 MYO2YOR326W 4725 nt1.7□□□□□ -2.14
UBP5P39944 tT(UGU)HtT(UGU)H 72 nt1.7□□□□□ -2.14
UBP5P39944 CHS1YNL192W 3396 nt1.7□□□□□ -2.14
UBP5P39944 YPR160W-AYPR160W-A 81 nt1.7□□□□□ -2.14
UBP5P39944 GEA2YEL022W 4380 nt1.69□□□□□ -2.14
UBP5P39944 YOR093CYOR093C 4947 nt1.69□□□□□ -2.14
UBP5P39944 SSK2YNR031C 4740 nt1.68□□□□□ -2.14
UBP5P39944 UTP21YLR409C 2820 nt1.68□□□□□ -2.14
UBP5P39944 RTT101YJL047C 2529 nt1.68□□□□□ -2.14
UBP5P39944 CAT8YMR280C 4302 nt1.68□□□□□ -2.14
UBP5P39944 YDL159C-BYDL159C-B 177 nt1.68□□□□□ -2.14
UBP5P39944 VPS15YBR097W 4365 nt1.68□□□□□ -2.14
UBP5P39944 EST1YLR233C 2100 nt1.67□□□□□ -2.14
UBP5P39944 PAU12YGR294W 363 nt1.67□□□□□ -2.14
UBP5P39944 YHR180C-BYHR180C-B 105 nt1.67□□□□□ -2.14
UBP5P39944 YBR296C-AYBR296C-A 120 nt1.67□□□□□ -2.14
UBP5P39944 PAU24YBR301W 363 nt1.67□□□□□ -2.14
UBP5P39944 MYO1YHR023W 5787 nt1.66□□□□□ -2.14
UBP5P39944 NIP1YMR309C 2439 nt1.65□□□□□ -2.15
UBP5P39944 SMC4YLR086W 4257 nt1.64□□□□□ -2.15
UBP5P39944 snR69snR69 101 nt1.64□□□□□ -2.15
UBP5P39944 tN(GUU)QtN(GUU)Q 71 nt1.62□□□□□ -2.15
UBP5P39944 EMC5YIL027C 426 nt1.62□□□□□ -2.15
UBP5P39944 STO1YMR125W 2586 nt1.61□□□□□ -2.15
UBP5P39944 PET111YMR257C 2403 nt1.61□□□□□ -2.15
UBP5P39944 MEC1YBR136W 7107 nt1.6□□□□□ -2.15
UBP5P39944 MSH3YCR092C 3057 nt1.6□□□□□ -2.15
UBP5P39944 FIG2YCR089W 4830 nt1.59□□□□□ -2.15
UBP5P39944 KAP122YGL016W 3246 nt1.59□□□□□ -2.15
UBP5P39944 DNF3YMR162C 4971 nt1.59□□□□□ -2.15
UBP5P39944 YMR247W-AYMR247W-A 144 nt1.59□□□□□ -2.15
UBP5P39944 CSE1YGL238W 2883 nt1.58□□□□□ -2.16
UBP5P39944 tQ(UUG)E2tQ(UUG)E2 72 nt1.57□□□□□ -2.16
UBP5P39944 PRP16YKR086W 3216 nt1.57□□□□□ -2.16
UBP5P39944 RDS3YPR094W 324 nt1.56□□□□□ -2.16
UBP5P39944 MON2YNL297C 4911 nt1.55□□□□□ -2.16
UBP5P39944 IRA1YBR140C 9279 nt1.54□□□□□ -2.16
UBP5P39944 TDA9YML081W 3756 nt1.53□□□□□ -2.16
UBP5P39944 YNL284C-BYNL284C-B 5268 nt1.52□□□□□ -2.17
UBP5P39944 NUP145YGL092W 3954 nt1.52□□□□□ -2.17
UBP5P39944 EST2YLR318W 2655 nt1.51□□□□□ -2.17
UBP5P39944 SPC110YDR356W 2835 nt1.5□□□□□ -2.17
UBP5P39944 SEC8YPR055W 3198 nt1.49□□□□□ -2.17
UBP5P39944 YPL060C-AYPL060C-A 3315 nt1.48□□□□□ -2.17
UBP5P39944 ULP2YIL031W 3105 nt1.48□□□□□ -2.17
UBP5P39944 LAA1YJL207C 6045 nt1.48□□□□□ -2.17
UBP5P39944 TRM732YMR259C 4263 nt1.48□□□□□ -2.17
UBP5P39944 YGR130CYGR130C 2451 nt1.47□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 37.1 ms