Protein–RNA interactions for Protein: P38956

SNF11, Transcription regulatory protein SNF11, yeastyeast

Predictions only

Length 169 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SNF11P38956 YLR154W-FYLR154W-F 141 nt-1.25□□□□□ -2.61
SNF11P38956 YER084W-AYER084W-A 513 nt-1.28□□□□□ -2.61
SNF11P38956 YFL063WYFL063W 456 nt-1.28□□□□□ -2.61
SNF11P38956 PRM3YPL192C 402 nt-1.28□□□□□ -2.61
SNF11P38956 YJL047C-AYJL047C-A 135 nt-1.29□□□□□ -2.62
SNF11P38956 YIL002W-AYIL002W-A 210 nt-1.3□□□□□ -2.62
SNF11P38956 YJL182CYJL182C 318 nt-1.3□□□□□ -2.62
SNF11P38956 EAF6YJR082C 342 nt-1.34□□□□□ -2.62
SNF11P38956 YMR193C-AYMR193C-A 387 nt-1.35□□□□□ -2.63
SNF11P38956 YER053C-AYER053C-A 114 nt-1.36□□□□□ -2.63
SNF11P38956 YGL182CYGL182C 324 nt-1.37□□□□□ -2.63
SNF11P38956 RPS27BYHR021C 249 nt-1.37□□□□□ -2.63
SNF11P38956 VPS20YMR077C 666 nt-1.37□□□□□ -2.63
SNF11P38956 CSE2YNR010W 450 nt-1.38□□□□□ -2.63
SNF11P38956 snR54snR54 86 nt-1.39□□□□□ -2.63
SNF11P38956 YOR170WYOR170W 306 nt-1.4□□□□□ -2.63
SNF11P38956 APQ12YIL040W 417 nt-1.41□□□□□ -2.64
SNF11P38956 YLR285C-AYLR285C-A 171 nt-1.41□□□□□ -2.64
SNF11P38956 Q0255Q0255 1419 nt-1.41□□□□□ -2.64
SNF11P38956 YOR015WYOR015W 360 nt-1.42□□□□□ -2.64
SNF11P38956 snR49snR49 165 nt-1.42□□□□□ -2.64
SNF11P38956 CSN9YDR179C 489 nt-1.43□□□□□ -2.64
SNF11P38956 YNR077CYNR077C 255 nt-1.44□□□□□ -2.64
SNF11P38956 YGR069WYGR069W 336 nt-1.45□□□□□ -2.64
SNF11P38956 YDR544CYDR544C 429 nt-1.46□□□□□ -2.64
SNF11P38956 YGL052WYGL052W 306 nt-1.46□□□□□ -2.64
SNF11P38956 YLL019W-AYLL019W-A 93 nt-1.46□□□□□ -2.64
SNF11P38956 BI2Q0110 1272 nt-1.47□□□□□ -2.64
SNF11P38956 YJL197C-AYJL197C-A 282 nt-1.47□□□□□ -2.64
SNF11P38956 YER006C-AYER006C-A 318 nt-1.49□□□□□ -2.65
SNF11P38956 YIL115W-AYIL115W-A 372 nt-1.49□□□□□ -2.65
SNF11P38956 YPR010C-AYPR010C-A 219 nt-1.49□□□□□ -2.65
SNF11P38956 TOM22YNL131W 459 nt-1.5□□□□□ -2.65
SNF11P38956 YIL032CYIL032C 357 nt-1.52□□□□□ -2.65
SNF11P38956 tY(GUA)QtY(GUA)Q 84 nt-1.55□□□□□ -2.66
SNF11P38956 YKL123WYKL123W 381 nt-1.55□□□□□ -2.66
SNF11P38956 YJL077W-AYJL077W-A 87 nt-1.56□□□□□ -2.66
SNF11P38956 SKI7YOR076C 2244 nt-1.58□□□□□ -2.66
SNF11P38956 tQ(UUG)QtQ(UUG)Q 76 nt-1.59□□□□□ -2.66
SNF11P38956 YAF9YNL107W 681 nt-1.6□□□□□ -2.67
SNF11P38956 HMRA1YCR097W 381 nt-1.61□□□□□ -2.67
SNF11P38956 snR74snR74 88 nt-1.61□□□□□ -2.67
SNF11P38956 snR41snR41 95 nt-1.62□□□□□ -2.67
SNF11P38956 STE18YJR086W 333 nt-1.63□□□□□ -2.67
SNF11P38956 YOR072W-BYOR072W-B 162 nt-1.64□□□□□ -2.67
SNF11P38956 snR189snR189 189 nt-1.64□□□□□ -2.67
SNF11P38956 YER137W-AYER137W-A 306 nt-1.65□□□□□ -2.67
SNF11P38956 YPR016W-AYPR016W-A 261 nt-1.66□□□□□ -2.68
SNF11P38956 JLP2YMR132C 627 nt-1.67□□□□□ -2.68
SNF11P38956 YML099W-AYML099W-A 330 nt-1.68□□□□□ -2.68
SNF11P38956 YNL122CYNL122C 348 nt-1.68□□□□□ -2.68
SNF11P38956 YDR048CYDR048C 315 nt-1.69□□□□□ -2.68
SNF11P38956 YOR314W-AYOR314W-A 111 nt-1.69□□□□□ -2.68
SNF11P38956 YLR434CYLR434C 384 nt-1.7□□□□□ -2.68
SNF11P38956 PMP2YEL017C-A 132 nt-1.71□□□□□ -2.68
SNF11P38956 YGL149WYGL149W 306 nt-1.72□□□□□ -2.68
SNF11P38956 snR60snR60 104 nt-1.76□□□□□ -2.69
SNF11P38956 YDL158CYDL158C 309 nt-1.77□□□□□ -2.69
SNF11P38956 YER090C-AYER090C-A 90 nt-1.77□□□□□ -2.69
SNF11P38956 YBL039C-AYBL039C-A 84 nt-1.77□□□□□ -2.69
SNF11P38956 snR69snR69 101 nt-1.79□□□□□ -2.7
SNF11P38956 YNL266WYNL266W 420 nt-1.79□□□□□ -2.7
SNF11P38956 snR50snR50 90 nt-1.81□□□□□ -2.7
SNF11P38956 CDC65tQ(CUG)M 72 nt-1.82□□□□□ -2.7
SNF11P38956 YDR102CYDR102C 333 nt-1.86□□□□□ -2.71
SNF11P38956 tW(UCA)QtW(UCA)Q 74 nt-1.86□□□□□ -2.71
SNF11P38956 YOR121CYOR121C 306 nt-1.87□□□□□ -2.71
SNF11P38956 YMR001C-AYMR001C-A 231 nt-1.89□□□□□ -2.71
SNF11P38956 YBR285WYBR285W 435 nt-1.89□□□□□ -2.71
SNF11P38956 snR77snR77 88 nt-1.9□□□□□ -2.71
SNF11P38956 snR39BsnR39B 96 nt-1.9□□□□□ -2.71
SNF11P38956 snR81snR81 201 nt-1.91□□□□□ -2.72
SNF11P38956 RDS3YPR094W 324 nt-1.91□□□□□ -2.72
SNF11P38956 YLR406C-AYLR406C-A 150 nt-1.92□□□□□ -2.72
SNF11P38956 YNL205CYNL205C 423 nt-1.92□□□□□ -2.72
SNF11P38956 YNL028WYNL028W 318 nt-1.93□□□□□ -2.72
SNF11P38956 YNL324WYNL324W 396 nt-1.95□□□□□ -2.72
SNF11P38956 YOL013W-BYOL013W-B 291 nt-1.96□□□□□ -2.72
SNF11P38956 YGR240C-AYGR240C-A 201 nt-1.97□□□□□ -2.72
SNF11P38956 YMR315W-AYMR315W-A 108 nt-1.97□□□□□ -2.72
SNF11P38956 snR67snR67 82 nt-1.98□□□□□ -2.73
SNF11P38956 YFL032WYFL032W 321 nt-1.98□□□□□ -2.73
SNF11P38956 YNR025CYNR025C 360 nt-1.98□□□□□ -2.73
SNF11P38956 BIL1YOR304C-A 231 nt-1.98□□□□□ -2.73
SNF11P38956 YER097WYER097W 330 nt-1.99□□□□□ -2.73
SNF11P38956 YLR202CYLR202C 327 nt-2□□□□□ -2.73
SNF11P38956 YBR126W-BYBR126W-B 144 nt-2.02□□□□□ -2.73
SNF11P38956 YML054C-AYML054C-A 159 nt-2.04□□□□□ -2.74
SNF11P38956 ATP6Q0085 780 nt-2.05□□□□□ -2.74
SNF11P38956 tM(CAU)Q2tM(CAU)Q2 78 nt-2.05□□□□□ -2.74
SNF11P38956 HTL1YCR020W-B 237 nt-2.06□□□□□ -2.74
SNF11P38956 YLR120W-AYLR120W-A 102 nt-2.06□□□□□ -2.74
SNF11P38956 YOR008C-AYOR008C-A 225 nt-2.11□□□□□ -2.75
SNF11P38956 YGR146C-AYGR146C-A 162 nt-2.12□□□□□ -2.75
SNF11P38956 YKL063CYKL063C 504 nt-2.12□□□□□ -2.75
SNF11P38956 tR(UCU)Q1tR(UCU)Q1 73 nt-2.14□□□□□ -2.75
SNF11P38956 YGL041CYGL041C 204 nt-2.15□□□□□ -2.75
SNF11P38956 ATP19YOL077W-A 207 nt-2.15□□□□□ -2.75
SNF11P38956 YOR293C-AYOR293C-A 150 nt-2.16□□□□□ -2.76
SNF11P38956 YOR381W-AYOR381W-A 168 nt-2.18□□□□□ -2.76
Retrieved 100 of 7,029 protein–RNA pairs in 7.3 ms