Protein–RNA interactions for Protein: P38307

DER1, Degradation in the endoplasmic reticulum protein 1, yeastyeast

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DER1P38307 VPS20YMR077C 666 nt-1.07□□□□□ -2.58
DER1P38307 PAU9YBL108C-A 129 nt-1.08□□□□□ -2.58
DER1P38307 YER006C-AYER006C-A 318 nt-1.09□□□□□ -2.58
DER1P38307 PRM3YPL192C 402 nt-1.09□□□□□ -2.58
DER1P38307 YLR264C-AYLR264C-A 117 nt-1.1□□□□□ -2.59
DER1P38307 YER079WYER079W 633 nt-1.11□□□□□ -2.59
DER1P38307 YFL063WYFL063W 456 nt-1.11□□□□□ -2.59
DER1P38307 COG6YNL041C 2520 nt-1.13□□□□□ -2.59
DER1P38307 SDH6YDR379C-A 240 nt-1.13□□□□□ -2.59
DER1P38307 STE18YJR086W 333 nt-1.14□□□□□ -2.59
DER1P38307 YPL060C-AYPL060C-A 3315 nt-1.15□□□□□ -2.59
DER1P38307 RPS27BYHR021C 249 nt-1.15□□□□□ -2.59
DER1P38307 YML100W-AYML100W-A 174 nt-1.16□□□□□ -2.6
DER1P38307 CSE2YNR010W 450 nt-1.16□□□□□ -2.6
DER1P38307 YNR077CYNR077C 255 nt-1.17□□□□□ -2.6
DER1P38307 CSN9YDR179C 489 nt-1.19□□□□□ -2.6
DER1P38307 YIL002W-AYIL002W-A 210 nt-1.19□□□□□ -2.6
DER1P38307 YMR193C-AYMR193C-A 387 nt-1.2□□□□□ -2.6
DER1P38307 YNL122CYNL122C 348 nt-1.21□□□□□ -2.6
DER1P38307 YJL182CYJL182C 318 nt-1.24□□□□□ -2.61
DER1P38307 snR41snR41 95 nt-1.26□□□□□ -2.61
DER1P38307 YER053C-AYER053C-A 114 nt-1.27□□□□□ -2.61
DER1P38307 YJL197C-AYJL197C-A 282 nt-1.27□□□□□ -2.61
DER1P38307 YIL115W-AYIL115W-A 372 nt-1.29□□□□□ -2.62
DER1P38307 YGR069WYGR069W 336 nt-1.3□□□□□ -2.62
DER1P38307 snR49snR49 165 nt-1.3□□□□□ -2.62
DER1P38307 APQ12YIL040W 417 nt-1.31□□□□□ -2.62
DER1P38307 TOM22YNL131W 459 nt-1.32□□□□□ -2.62
DER1P38307 YLL019W-AYLL019W-A 93 nt-1.33□□□□□ -2.62
DER1P38307 YGL052WYGL052W 306 nt-1.35□□□□□ -2.63
DER1P38307 YOR015WYOR015W 360 nt-1.35□□□□□ -2.63
DER1P38307 YDR544CYDR544C 429 nt-1.37□□□□□ -2.63
DER1P38307 YLR434CYLR434C 384 nt-1.37□□□□□ -2.63
DER1P38307 YPR010C-AYPR010C-A 219 nt-1.38□□□□□ -2.63
DER1P38307 YGL182CYGL182C 324 nt-1.4□□□□□ -2.63
DER1P38307 YNR025CYNR025C 360 nt-1.41□□□□□ -2.64
DER1P38307 YLR154W-FYLR154W-F 141 nt-1.42□□□□□ -2.64
DER1P38307 YJL077W-AYJL077W-A 87 nt-1.44□□□□□ -2.64
DER1P38307 YOL013W-BYOL013W-B 291 nt-1.45□□□□□ -2.64
DER1P38307 YER137W-AYER137W-A 306 nt-1.46□□□□□ -2.64
DER1P38307 YOR072W-BYOR072W-B 162 nt-1.46□□□□□ -2.64
DER1P38307 tQ(UUG)QtQ(UUG)Q 76 nt-1.47□□□□□ -2.64
DER1P38307 YPR016W-AYPR016W-A 261 nt-1.47□□□□□ -2.64
DER1P38307 HMRA1YCR097W 381 nt-1.48□□□□□ -2.65
DER1P38307 YDR048CYDR048C 315 nt-1.48□□□□□ -2.65
DER1P38307 tP(UGG)QtP(UGG)Q 72 nt-1.49□□□□□ -2.65
DER1P38307 YOR170WYOR170W 306 nt-1.49□□□□□ -2.65
DER1P38307 YAF9YNL107W 681 nt-1.5□□□□□ -2.65
DER1P38307 tR(UCU)Q1tR(UCU)Q1 73 nt-1.55□□□□□ -2.66
DER1P38307 snR78snR78 87 nt-1.56□□□□□ -2.66
DER1P38307 YML099W-AYML099W-A 330 nt-1.57□□□□□ -2.66
DER1P38307 snR60snR60 104 nt-1.59□□□□□ -2.66
DER1P38307 YGL149WYGL149W 306 nt-1.59□□□□□ -2.66
DER1P38307 YIL032CYIL032C 357 nt-1.59□□□□□ -2.66
DER1P38307 YOR314W-AYOR314W-A 111 nt-1.59□□□□□ -2.66
DER1P38307 snR74snR74 88 nt-1.61□□□□□ -2.67
DER1P38307 YLR202CYLR202C 327 nt-1.61□□□□□ -2.67
DER1P38307 YMR001C-AYMR001C-A 231 nt-1.62□□□□□ -2.67
DER1P38307 YOR121CYOR121C 306 nt-1.62□□□□□ -2.67
DER1P38307 YDL158CYDL158C 309 nt-1.63□□□□□ -2.67
DER1P38307 tW(UCA)QtW(UCA)Q 74 nt-1.63□□□□□ -2.67
DER1P38307 YLR406C-AYLR406C-A 150 nt-1.63□□□□□ -2.67
DER1P38307 JLP2YMR132C 627 nt-1.65□□□□□ -2.67
DER1P38307 snR69snR69 101 nt-1.66□□□□□ -2.68
DER1P38307 YER090C-AYER090C-A 90 nt-1.66□□□□□ -2.68
DER1P38307 YBL039C-AYBL039C-A 84 nt-1.66□□□□□ -2.68
DER1P38307 YNL266WYNL266W 420 nt-1.66□□□□□ -2.68
DER1P38307 YKL063CYKL063C 504 nt-1.67□□□□□ -2.68
DER1P38307 BIL1YOR304C-A 231 nt-1.68□□□□□ -2.68
DER1P38307 snR50snR50 90 nt-1.68□□□□□ -2.68
DER1P38307 SKI7YOR076C 2244 nt-1.68□□□□□ -2.68
DER1P38307 ATP19YOL077W-A 207 nt-1.69□□□□□ -2.68
DER1P38307 snR189snR189 189 nt-1.71□□□□□ -2.68
DER1P38307 YDR102CYDR102C 333 nt-1.72□□□□□ -2.68
DER1P38307 YNL028WYNL028W 318 nt-1.72□□□□□ -2.68
DER1P38307 tY(GUA)QtY(GUA)Q 84 nt-1.75□□□□□ -2.69
DER1P38307 YBR285WYBR285W 435 nt-1.75□□□□□ -2.69
DER1P38307 RDS3YPR094W 324 nt-1.77□□□□□ -2.69
DER1P38307 HTL1YCR020W-B 237 nt-1.78□□□□□ -2.69
DER1P38307 YNL324WYNL324W 396 nt-1.78□□□□□ -2.69
DER1P38307 snR67snR67 82 nt-1.83□□□□□ -2.7
DER1P38307 YFL032WYFL032W 321 nt-1.84□□□□□ -2.7
DER1P38307 YER097WYER097W 330 nt-1.85□□□□□ -2.71
DER1P38307 YEL050W-AYEL050W-A 192 nt-1.86□□□□□ -2.71
DER1P38307 YLR120W-AYLR120W-A 102 nt-1.87□□□□□ -2.71
DER1P38307 PMP2YEL017C-A 132 nt-1.88□□□□□ -2.71
DER1P38307 YAL063C-AYAL063C-A 291 nt-1.88□□□□□ -2.71
DER1P38307 tM(CAU)Q2tM(CAU)Q2 78 nt-1.89□□□□□ -2.71
DER1P38307 ATP6Q0085 780 nt-1.91□□□□□ -2.72
DER1P38307 YGR035CYGR035C 351 nt-1.92□□□□□ -2.72
DER1P38307 CDC65tQ(CUG)M 72 nt-1.96□□□□□ -2.72
DER1P38307 YGR240C-AYGR240C-A 201 nt-1.97□□□□□ -2.72
DER1P38307 YML054C-AYML054C-A 159 nt-1.97□□□□□ -2.72
DER1P38307 YGR146C-AYGR146C-A 162 nt-1.99□□□□□ -2.73
DER1P38307 snR39BsnR39B 96 nt-1.99□□□□□ -2.73
DER1P38307 YGL041CYGL041C 204 nt-2□□□□□ -2.73
DER1P38307 YOR008C-AYOR008C-A 225 nt-2□□□□□ -2.73
DER1P38307 YAL068W-AYAL068W-A 255 nt-2.02□□□□□ -2.73
DER1P38307 YNL205CYNL205C 423 nt-2.03□□□□□ -2.73
DER1P38307 tD(GUC)QtD(GUC)Q 75 nt-2.04□□□□□ -2.74
Retrieved 100 of 7,029 protein–RNA pairs in 48.1 ms