Protein–RNA interactions for Protein: P38205

NCL1, Multisite-specific tRNA:(cytosine-C(5))-methyltransferase, yeastyeast

Known RBP Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NCL1P38205 KCS1YDR017C 3153 nt2.02□□□□□ -2.09
NCL1P38205 SMC1YFL008W 3678 nt2.02□□□□□ -2.09
NCL1P38205 MYO4YAL029C 4416 nt2.02□□□□□ -2.09
NCL1P38205 ASE1YOR058C 2658 nt2.01□□□□□ -2.09
NCL1P38205 KAP122YGL016W 3246 nt2□□□□□ -2.09
NCL1P38205 YLR422WYLR422W 5799 nt2□□□□□ -2.09
NCL1P38205 FKS1YLR342W 5631 nt1.99□□□□□ -2.09
NCL1P38205 YOL164W-AYOL164W-A 183 nt1.99□□□□□ -2.09
NCL1P38205 RPL26BYGR034W 384 nt1.98□□□□□ -2.09
NCL1P38205 SMC4YLR086W 4257 nt1.97□□□□□ -2.09
NCL1P38205 ROM2YLR371W 4071 nt1.97□□□□□ -2.09
NCL1P38205 WAR1YML076C 2835 nt1.97□□□□□ -2.09
NCL1P38205 SKI3YPR189W 4299 nt1.96□□□□□ -2.1
NCL1P38205 YBR196C-AYBR196C-A 150 nt1.96□□□□□ -2.1
NCL1P38205 STO1YMR125W 2586 nt1.95□□□□□ -2.1
NCL1P38205 SET3YKR029C 2256 nt1.95□□□□□ -2.1
NCL1P38205 YGR240C-AYGR240C-A 201 nt1.95□□□□□ -2.1
NCL1P38205 YMR272W-BYMR272W-B 108 nt1.95□□□□□ -2.1
NCL1P38205 TMA7YLR262C-A 195 nt1.94□□□□□ -2.1
NCL1P38205 YBL100W-CYBL100W-C 120 nt1.94□□□□□ -2.1
NCL1P38205 AZF1YOR113W 2745 nt1.92□□□□□ -2.1
NCL1P38205 YLR286W-AYLR286W-A 135 nt1.89□□□□□ -2.11
NCL1P38205 SEC10YLR166C 2616 nt1.88□□□□□ -2.11
NCL1P38205 GLG1YKR058W 1851 nt1.88□□□□□ -2.11
NCL1P38205 SEC3YER008C 4011 nt1.88□□□□□ -2.11
NCL1P38205 snR53snR53 91 nt1.88□□□□□ -2.11
NCL1P38205 NNF2YGR089W 2811 nt1.88□□□□□ -2.11
NCL1P38205 CHS1YNL192W 3396 nt1.87□□□□□ -2.11
NCL1P38205 MON2YNL297C 4911 nt1.87□□□□□ -2.11
NCL1P38205 TRM732YMR259C 4263 nt1.87□□□□□ -2.11
NCL1P38205 ORC3YLL004W 1851 nt1.86□□□□□ -2.11
NCL1P38205 GEA2YEL022W 4380 nt1.86□□□□□ -2.11
NCL1P38205 UBP3YER151C 2739 nt1.86□□□□□ -2.11
NCL1P38205 YHR214C-BYHR214C-B 5382 nt1.85□□□□□ -2.11
NCL1P38205 PIK1YNL267W 3201 nt1.85□□□□□ -2.11
NCL1P38205 IRC20YLR247C 4671 nt1.85□□□□□ -2.11
NCL1P38205 PEP1YBL017C 4740 nt1.84□□□□□ -2.11
NCL1P38205 snR47snR47 99 nt1.84□□□□□ -2.11
NCL1P38205 FAB1YFR019W 6837 nt1.83□□□□□ -2.12
NCL1P38205 YBR200W-AYBR200W-A 165 nt1.83□□□□□ -2.12
NCL1P38205 APL3YBL037W 3078 nt1.82□□□□□ -2.12
NCL1P38205 CDC25YLR310C 4770 nt1.81□□□□□ -2.12
NCL1P38205 SWI4YER111C 3282 nt1.8□□□□□ -2.12
NCL1P38205 PKH3YDR466W 2697 nt1.8□□□□□ -2.12
NCL1P38205 SEC8YPR055W 3198 nt1.79□□□□□ -2.12
NCL1P38205 tN(GUU)QtN(GUU)Q 71 nt1.79□□□□□ -2.12
NCL1P38205 PMD1YER132C 5262 nt1.78□□□□□ -2.12
NCL1P38205 CFT1YDR301W 4074 nt1.77□□□□□ -2.13
NCL1P38205 snR64snR64 101 nt1.77□□□□□ -2.13
NCL1P38205 BEM3YPL115C 3387 nt1.76□□□□□ -2.13
NCL1P38205 PRP16YKR086W 3216 nt1.74□□□□□ -2.13
NCL1P38205 YLR399W-AYLR399W-A 105 nt1.73□□□□□ -2.13
NCL1P38205 YMR247W-AYMR247W-A 144 nt1.73□□□□□ -2.13
NCL1P38205 YPR160W-AYPR160W-A 81 nt1.73□□□□□ -2.13
NCL1P38205 NUP145YGL092W 3954 nt1.72□□□□□ -2.13
NCL1P38205 VPS15YBR097W 4365 nt1.72□□□□□ -2.13
NCL1P38205 MSH3YCR092C 3057 nt1.72□□□□□ -2.13
NCL1P38205 tD(GUC)QtD(GUC)Q 75 nt1.72□□□□□ -2.13
NCL1P38205 YPL060C-AYPL060C-A 3315 nt1.71□□□□□ -2.14
NCL1P38205 NUP188YML103C 4968 nt1.71□□□□□ -2.14
NCL1P38205 YDR371C-AYDR371C-A 105 nt1.71□□□□□ -2.14
NCL1P38205 YSP1YHR155W 3687 nt1.71□□□□□ -2.14
NCL1P38205 ULP2YIL031W 3105 nt1.71□□□□□ -2.14
NCL1P38205 ANS1YHR126C 480 nt1.7□□□□□ -2.14
NCL1P38205 tT(UGU)HtT(UGU)H 72 nt1.69□□□□□ -2.14
NCL1P38205 MSN5YDR335W 3675 nt1.68□□□□□ -2.14
NCL1P38205 BST1YFL025C 3090 nt1.68□□□□□ -2.14
NCL1P38205 FIG2YCR089W 4830 nt1.67□□□□□ -2.14
NCL1P38205 CDC39YCR093W 6327 nt1.67□□□□□ -2.14
NCL1P38205 EST1YLR233C 2100 nt1.66□□□□□ -2.14
NCL1P38205 YLR299C-AYLR299C-A 93 nt1.65□□□□□ -2.15
NCL1P38205 YOR093CYOR093C 4947 nt1.63□□□□□ -2.15
NCL1P38205 snR69snR69 101 nt1.62□□□□□ -2.15
NCL1P38205 YKL225WYKL225W 348 nt1.61□□□□□ -2.15
NCL1P38205 snR50snR50 90 nt1.61□□□□□ -2.15
NCL1P38205 PET127YOR017W 2403 nt1.6□□□□□ -2.15
NCL1P38205 SXM1YDR395W 2835 nt1.59□□□□□ -2.15
NCL1P38205 YDL159C-BYDL159C-B 177 nt1.59□□□□□ -2.15
NCL1P38205 NST1YNL091W 3723 nt1.59□□□□□ -2.16
NCL1P38205 CSE1YGL238W 2883 nt1.59□□□□□ -2.16
NCL1P38205 EST2YLR318W 2655 nt1.59□□□□□ -2.16
NCL1P38205 BRR2YER172C 6492 nt1.57□□□□□ -2.16
NCL1P38205 REV3YPL167C 4515 nt1.56□□□□□ -2.16
NCL1P38205 CAT8YMR280C 4302 nt1.56□□□□□ -2.16
NCL1P38205 DNF3YMR162C 4971 nt1.54□□□□□ -2.16
NCL1P38205 YBR109W-AYBR109W-A 225 nt1.54□□□□□ -2.16
NCL1P38205 RDS3YPR094W 324 nt1.53□□□□□ -2.16
NCL1P38205 tQ(UUG)E2tQ(UUG)E2 72 nt1.52□□□□□ -2.17
NCL1P38205 LAA1YJL207C 6045 nt1.52□□□□□ -2.17
NCL1P38205 SSK2YNR031C 4740 nt1.52□□□□□ -2.17
NCL1P38205 CLU1YMR012W 3834 nt1.52□□□□□ -2.17
NCL1P38205 MEC1YBR136W 7107 nt1.52□□□□□ -2.17
NCL1P38205 YML054C-AYML054C-A 159 nt1.5□□□□□ -2.17
NCL1P38205 HUG1YML058W-A 207 nt1.49□□□□□ -2.17
NCL1P38205 CCH1YGR217W 6120 nt1.48□□□□□ -2.17
NCL1P38205 YHR180C-BYHR180C-B 105 nt1.47□□□□□ -2.17
NCL1P38205 snR38snR38 95 nt1.47□□□□□ -2.17
NCL1P38205 IRA1YBR140C 9279 nt1.46□□□□□ -2.18
NCL1P38205 YLL006W-AYLL006W-A 177 nt1.46□□□□□ -2.18
NCL1P38205 SPC110YDR356W 2835 nt1.46□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 14 ms