Protein–RNA interactions for Protein: P35817

BDF1, Bromodomain-containing factor 1, yeastyeast

Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BDF1P35817 PKH3YDR466W 2697 nt2.87□□□□□ -1.95
BDF1P35817 SLH1YGR271W 5904 nt2.86□□□□□ -1.95
BDF1P35817 RAD50YNL250W 3939 nt2.86□□□□□ -1.95
BDF1P35817 TAO3YIL129C 7131 nt2.86□□□□□ -1.95
BDF1P35817 INO80YGL150C 4470 nt2.85□□□□□ -1.95
BDF1P35817 MSH6YDR097C 3729 nt2.85□□□□□ -1.95
BDF1P35817 CHC1YGL206C 4962 nt2.84□□□□□ -1.95
BDF1P35817 ULP2YIL031W 3105 nt2.83□□□□□ -1.96
BDF1P35817 EST2YLR318W 2655 nt2.83□□□□□ -1.96
BDF1P35817 PRP16YKR086W 3216 nt2.83□□□□□ -1.96
BDF1P35817 HIR3YJR140C 4947 nt2.83□□□□□ -1.96
BDF1P35817 ECM29YHL030W 5607 nt2.83□□□□□ -1.96
BDF1P35817 KOG1YHR186C 4674 nt2.82□□□□□ -1.96
BDF1P35817 TFC3YAL001C 3483 nt2.82□□□□□ -1.96
BDF1P35817 CSE1YGL238W 2883 nt2.81□□□□□ -1.96
BDF1P35817 HSL1YKL101W 4557 nt2.8□□□□□ -1.96
BDF1P35817 TOM1YDR457W 9807 nt2.8□□□□□ -1.96
BDF1P35817 snR14snR14 160 nt2.8□□□□□ -1.96
BDF1P35817 YLR422WYLR422W 5799 nt2.79□□□□□ -1.96
BDF1P35817 SEC7YDR170C 6030 nt2.78□□□□□ -1.96
BDF1P35817 YSP1YHR155W 3687 nt2.78□□□□□ -1.96
BDF1P35817 GIP3YPL137C 3831 nt2.77□□□□□ -1.97
BDF1P35817 NST1YNL091W 3723 nt2.77□□□□□ -1.97
BDF1P35817 CDC25YLR310C 4770 nt2.77□□□□□ -1.97
BDF1P35817 MOT1YPL082C 5604 nt2.77□□□□□ -1.97
BDF1P35817 CAT8YMR280C 4302 nt2.77□□□□□ -1.97
BDF1P35817 YOR376W-AYOR376W-A 156 nt2.76□□□□□ -1.97
BDF1P35817 SEC8YPR055W 3198 nt2.76□□□□□ -1.97
BDF1P35817 BNR1YIL159W 4128 nt2.76□□□□□ -1.97
BDF1P35817 FAR11YNL127W 2862 nt2.75□□□□□ -1.97
BDF1P35817 KCS1YDR017C 3153 nt2.74□□□□□ -1.97
BDF1P35817 GEA1YJR031C 4227 nt2.74□□□□□ -1.97
BDF1P35817 STH1YIL126W 4080 nt2.73□□□□□ -1.97
BDF1P35817 UTP22YGR090W 3714 nt2.73□□□□□ -1.97
BDF1P35817 SRB8YCR081W 4284 nt2.72□□□□□ -1.97
BDF1P35817 YHR086W-AYHR086W-A 162 nt2.7□□□□□ -1.98
BDF1P35817 YJL077W-AYJL077W-A 87 nt2.7□□□□□ -1.98
BDF1P35817 STO1YMR125W 2586 nt2.69□□□□□ -1.98
BDF1P35817 YDR209CYDR209C 414 nt2.69□□□□□ -1.98
BDF1P35817 tN(GUU)QtN(GUU)Q 71 nt2.68□□□□□ -1.98
BDF1P35817 HUG1YML058W-A 207 nt2.68□□□□□ -1.98
BDF1P35817 IRC20YLR247C 4671 nt2.67□□□□□ -1.98
BDF1P35817 YLR399W-AYLR399W-A 105 nt2.67□□□□□ -1.98
BDF1P35817 GEA2YEL022W 4380 nt2.65□□□□□ -1.98
BDF1P35817 RAV1YJR033C 4074 nt2.65□□□□□ -1.98
BDF1P35817 SIP4YJL089W 2490 nt2.65□□□□□ -1.98
BDF1P35817 TOP2YNL088W 4287 nt2.65□□□□□ -1.99
BDF1P35817 KRE33YNL132W 3171 nt2.63□□□□□ -1.99
BDF1P35817 SEC16YPL085W 6588 nt2.63□□□□□ -1.99
BDF1P35817 FLO11YIR019C 4104 nt2.63□□□□□ -1.99
BDF1P35817 YCS4YLR272C 3531 nt2.63□□□□□ -1.99
BDF1P35817 PEP1YBL017C 4740 nt2.63□□□□□ -1.99
BDF1P35817 MSN5YDR335W 3675 nt2.62□□□□□ -1.99
BDF1P35817 KAP122YGL016W 3246 nt2.62□□□□□ -1.99
BDF1P35817 VPS13YLL040C 9435 nt2.61□□□□□ -1.99
BDF1P35817 PAU12YGR294W 363 nt2.61□□□□□ -1.99
BDF1P35817 MYO4YAL029C 4416 nt2.61□□□□□ -1.99
BDF1P35817 YPL060C-AYPL060C-A 3315 nt2.61□□□□□ -1.99
BDF1P35817 HER1YOR227W 3741 nt2.6□□□□□ -1.99
BDF1P35817 FAB1YFR019W 6837 nt2.59□□□□□ -1.99
BDF1P35817 SPF1YEL031W 3648 nt2.59□□□□□ -1.99
BDF1P35817 APL3YBL037W 3078 nt2.59□□□□□ -1.99
BDF1P35817 PSD2YGR170W 3417 nt2.59□□□□□ -2
BDF1P35817 MSH3YCR092C 3057 nt2.58□□□□□ -2
BDF1P35817 SEC3YER008C 4011 nt2.58□□□□□ -2
BDF1P35817 SMC4YLR086W 4257 nt2.57□□□□□ -2
BDF1P35817 YDL114W-AYDL114W-A 114 nt2.56□□□□□ -2
BDF1P35817 BUL2YML111W 2763 nt2.56□□□□□ -2
BDF1P35817 CSF1YLR087C 8877 nt2.55□□□□□ -2
BDF1P35817 TOR1YJR066W 7413 nt2.54□□□□□ -2
BDF1P35817 tQ(UUG)QtQ(UUG)Q 76 nt2.54□□□□□ -2
BDF1P35817 UBP2YOR124C 3819 nt2.54□□□□□ -2
BDF1P35817 FYV8YGR196C 2454 nt2.53□□□□□ -2
BDF1P35817 TRA1YHR099W 11235 nt2.52□□□□□ -2.01
BDF1P35817 snR40snR40 97 nt2.51□□□□□ -2.01
BDF1P35817 BNI1YNL271C 5862 nt2.49□□□□□ -2.01
BDF1P35817 NUP192YJL039C 5052 nt2.47□□□□□ -2.01
BDF1P35817 DGR1YNL130C-A 147 nt2.44□□□□□ -2.02
BDF1P35817 SEC31YDL195W 3822 nt2.43□□□□□ -2.02
BDF1P35817 SKI3YPR189W 4299 nt2.43□□□□□ -2.02
BDF1P35817 MLP2YIL149C 5040 nt2.42□□□□□ -2.02
BDF1P35817 YER090C-AYER090C-A 90 nt2.41□□□□□ -2.02
BDF1P35817 tV(UAC)QtV(UAC)Q 76 nt2.4□□□□□ -2.03
BDF1P35817 IRA2YOL081W 9240 nt2.4□□□□□ -2.03
BDF1P35817 UBR2YLR024C 5619 nt2.39□□□□□ -2.03
BDF1P35817 CCH1YGR217W 6120 nt2.38□□□□□ -2.03
BDF1P35817 SWI4YER111C 3282 nt2.36□□□□□ -2.03
BDF1P35817 NUP145YGL092W 3954 nt2.36□□□□□ -2.03
BDF1P35817 YLR419WYLR419W 4308 nt2.35□□□□□ -2.03
BDF1P35817 YLL006W-AYLL006W-A 177 nt2.35□□□□□ -2.03
BDF1P35817 DNF1YER166W 4716 nt2.33□□□□□ -2.04
BDF1P35817 YOL098CYOL098C 3114 nt2.32□□□□□ -2.04
BDF1P35817 YMR272W-BYMR272W-B 108 nt2.3□□□□□ -2.04
BDF1P35817 YKL106C-AYKL106C-A 120 nt2.29□□□□□ -2.04
BDF1P35817 SPC110YDR356W 2835 nt2.29□□□□□ -2.04
BDF1P35817 snR67snR67 82 nt2.27□□□□□ -2.05
BDF1P35817 BPH1YCR032W 6504 nt2.27□□□□□ -2.05
BDF1P35817 FKS1YLR342W 5631 nt2.26□□□□□ -2.05
BDF1P35817 TOR2YKL203C 7425 nt2.25□□□□□ -2.05
BDF1P35817 NEO1YIL048W 3456 nt2.24□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms