Protein–RNA interactions for Protein: P0C7V0

LINC00271, Putative uncharacterized protein encoded by LINC00271, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271P0C7V0 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.26■□□□□ 0.99
LINC00271P0C7V0 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LINC00271P0C7V0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
LINC00271P0C7V0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
LINC00271P0C7V0 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LINC00271P0C7V0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LINC00271P0C7V0 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.26■□□□□ 0.99
LINC00271P0C7V0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LINC00271P0C7V0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LINC00271P0C7V0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LINC00271P0C7V0 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LINC00271P0C7V0 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LINC00271P0C7V0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LINC00271P0C7V0 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LINC00271P0C7V0 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LINC00271P0C7V0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.25■□□□□ 0.99
LINC00271P0C7V0 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
LINC00271P0C7V0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LINC00271P0C7V0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
LINC00271P0C7V0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.25■□□□□ 0.99
LINC00271P0C7V0 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LINC00271P0C7V0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LINC00271P0C7V0 AC004980.1-204ENST00000429707 299 ntBASIC21.25■□□□□ 0.99
LINC00271P0C7V0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.25■□□□□ 0.99
LINC00271P0C7V0 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
LINC00271P0C7V0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.25■□□□□ 0.99
LINC00271P0C7V0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.25■□□□□ 0.99
LINC00271P0C7V0 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
LINC00271P0C7V0 FAM87A-204ENST00000613235 858 ntBASIC21.25■□□□□ 0.99
LINC00271P0C7V0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.25■□□□□ 0.99
LINC00271P0C7V0 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
LINC00271P0C7V0 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LINC00271P0C7V0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LINC00271P0C7V0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.24■□□□□ 0.99
LINC00271P0C7V0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LINC00271P0C7V0 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.24■□□□□ 0.99
LINC00271P0C7V0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.24■□□□□ 0.99
LINC00271P0C7V0 KRT8P17-201ENST00000453110 1448 ntBASIC21.24■□□□□ 0.99
LINC00271P0C7V0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.24■□□□□ 0.99
LINC00271P0C7V0 DGCR10-201ENST00000609839 495 ntBASIC21.24■□□□□ 0.99
LINC00271P0C7V0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LINC00271P0C7V0 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.24■□□□□ 0.99
LINC00271P0C7V0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.24■□□□□ 0.99
LINC00271P0C7V0 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LINC00271P0C7V0 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
LINC00271P0C7V0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LINC00271P0C7V0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LINC00271P0C7V0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.23■□□□□ 0.99
LINC00271P0C7V0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.23■□□□□ 0.99
LINC00271P0C7V0 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.23■□□□□ 0.99
LINC00271P0C7V0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
LINC00271P0C7V0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LINC00271P0C7V0 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LINC00271P0C7V0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.23■□□□□ 0.99
LINC00271P0C7V0 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LINC00271P0C7V0 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.23■□□□□ 0.99
LINC00271P0C7V0 AC087388.1-201ENST00000571370 1112 ntBASIC21.23■□□□□ 0.99
LINC00271P0C7V0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.23■□□□□ 0.99
LINC00271P0C7V0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.23■□□□□ 0.99
LINC00271P0C7V0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.23■□□□□ 0.99
LINC00271P0C7V0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.23■□□□□ 0.99
LINC00271P0C7V0 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LINC00271P0C7V0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LINC00271P0C7V0 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.23■□□□□ 0.99
LINC00271P0C7V0 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LINC00271P0C7V0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LINC00271P0C7V0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.22■□□□□ 0.99
LINC00271P0C7V0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LINC00271P0C7V0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.22■□□□□ 0.99
LINC00271P0C7V0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.22■□□□□ 0.99
LINC00271P0C7V0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LINC00271P0C7V0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.22■□□□□ 0.99
LINC00271P0C7V0 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.22■□□□□ 0.99
LINC00271P0C7V0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LINC00271P0C7V0 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LINC00271P0C7V0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LINC00271P0C7V0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
LINC00271P0C7V0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LINC00271P0C7V0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LINC00271P0C7V0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LINC00271P0C7V0 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LINC00271P0C7V0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LINC00271P0C7V0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
LINC00271P0C7V0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LINC00271P0C7V0 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
LINC00271P0C7V0 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
LINC00271P0C7V0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LINC00271P0C7V0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LINC00271P0C7V0 AP006587.1-201ENST00000534129 1502 ntBASIC21.21■□□□□ 0.99
LINC00271P0C7V0 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LINC00271P0C7V0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LINC00271P0C7V0 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LINC00271P0C7V0 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
LINC00271P0C7V0 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.21■□□□□ 0.99
LINC00271P0C7V0 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LINC00271P0C7V0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LINC00271P0C7V0 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.21■□□□□ 0.99
LINC00271P0C7V0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.21■□□□□ 0.99
LINC00271P0C7V0 C2orf69P3-201ENST00000565542 1120 ntBASIC21.21■□□□□ 0.99
LINC00271P0C7V0 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms