Protein–RNA interactions for Protein: P0C2J1

TY1B-PR3, Transposon Ty1-PR3 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-PR3P0C2J1 snR189snR189 189 nt-1.29□□□□□ -2.62
TY1B-PR3P0C2J1 VPS20YMR077C 666 nt-1.3□□□□□ -2.62
TY1B-PR3P0C2J1 YGL052WYGL052W 306 nt-1.31□□□□□ -2.62
TY1B-PR3P0C2J1 YBR285WYBR285W 435 nt-1.31□□□□□ -2.62
TY1B-PR3P0C2J1 YIL029CYIL029C 429 nt-1.32□□□□□ -2.62
TY1B-PR3P0C2J1 tP(UGG)QtP(UGG)Q 72 nt-1.33□□□□□ -2.62
TY1B-PR3P0C2J1 RPS27BYHR021C 249 nt-1.34□□□□□ -2.62
TY1B-PR3P0C2J1 YDL016CYDL016C 303 nt-1.36□□□□□ -2.63
TY1B-PR3P0C2J1 YGR174W-AYGR174W-A 87 nt-1.36□□□□□ -2.63
TY1B-PR3P0C2J1 YAR047CYAR047C 321 nt-1.36□□□□□ -2.63
TY1B-PR3P0C2J1 YGR069WYGR069W 336 nt-1.37□□□□□ -2.63
TY1B-PR3P0C2J1 TOM22YNL131W 459 nt-1.37□□□□□ -2.63
TY1B-PR3P0C2J1 YOR121CYOR121C 306 nt-1.37□□□□□ -2.63
TY1B-PR3P0C2J1 YLL019W-AYLL019W-A 93 nt-1.38□□□□□ -2.63
TY1B-PR3P0C2J1 tY(GUA)QtY(GUA)Q 84 nt-1.39□□□□□ -2.63
TY1B-PR3P0C2J1 PCC1YKR095W-A 267 nt-1.39□□□□□ -2.63
TY1B-PR3P0C2J1 YER090C-AYER090C-A 90 nt-1.4□□□□□ -2.63
TY1B-PR3P0C2J1 CSE2YNR010W 450 nt-1.4□□□□□ -2.63
TY1B-PR3P0C2J1 YOR170WYOR170W 306 nt-1.42□□□□□ -2.64
TY1B-PR3P0C2J1 PRM3YPL192C 402 nt-1.42□□□□□ -2.64
TY1B-PR3P0C2J1 SKI7YOR076C 2244 nt-1.45□□□□□ -2.64
TY1B-PR3P0C2J1 GPI15YNL038W 690 nt-1.45□□□□□ -2.64
TY1B-PR3P0C2J1 snR74snR74 88 nt-1.47□□□□□ -2.64
TY1B-PR3P0C2J1 YIL115W-AYIL115W-A 372 nt-1.47□□□□□ -2.64
TY1B-PR3P0C2J1 YAF9YNL107W 681 nt-1.47□□□□□ -2.64
TY1B-PR3P0C2J1 YDR544CYDR544C 429 nt-1.47□□□□□ -2.65
TY1B-PR3P0C2J1 YLR412C-AYLR412C-A 207 nt-1.48□□□□□ -2.65
TY1B-PR3P0C2J1 snR81snR81 201 nt-1.49□□□□□ -2.65
TY1B-PR3P0C2J1 YMR193C-AYMR193C-A 387 nt-1.49□□□□□ -2.65
TY1B-PR3P0C2J1 tQ(UUG)QtQ(UUG)Q 76 nt-1.49□□□□□ -2.65
TY1B-PR3P0C2J1 YJL077W-AYJL077W-A 87 nt-1.49□□□□□ -2.65
TY1B-PR3P0C2J1 BI2Q0110 1272 nt-1.5□□□□□ -2.65
TY1B-PR3P0C2J1 YGL149WYGL149W 306 nt-1.5□□□□□ -2.65
TY1B-PR3P0C2J1 JLP2YMR132C 627 nt-1.5□□□□□ -2.65
TY1B-PR3P0C2J1 YHR125WYHR125W 306 nt-1.51□□□□□ -2.65
TY1B-PR3P0C2J1 YOR314W-AYOR314W-A 111 nt-1.52□□□□□ -2.65
TY1B-PR3P0C2J1 snR54snR54 86 nt-1.52□□□□□ -2.65
TY1B-PR3P0C2J1 YJL197C-AYJL197C-A 282 nt-1.52□□□□□ -2.65
TY1B-PR3P0C2J1 YNL266WYNL266W 420 nt-1.53□□□□□ -2.65
TY1B-PR3P0C2J1 YLR269CYLR269C 351 nt-1.55□□□□□ -2.66
TY1B-PR3P0C2J1 snR77snR77 88 nt-1.58□□□□□ -2.66
TY1B-PR3P0C2J1 PMP2YEL017C-A 132 nt-1.59□□□□□ -2.66
TY1B-PR3P0C2J1 YER006C-AYER006C-A 318 nt-1.6□□□□□ -2.67
TY1B-PR3P0C2J1 CDC65tQ(CUG)M 72 nt-1.6□□□□□ -2.67
TY1B-PR3P0C2J1 YOR072W-BYOR072W-B 162 nt-1.61□□□□□ -2.67
TY1B-PR3P0C2J1 YPR016W-AYPR016W-A 261 nt-1.62□□□□□ -2.67
TY1B-PR3P0C2J1 YJL047C-AYJL047C-A 135 nt-1.62□□□□□ -2.67
TY1B-PR3P0C2J1 YAL066WYAL066W 309 nt-1.64□□□□□ -2.67
TY1B-PR3P0C2J1 YNL205CYNL205C 423 nt-1.66□□□□□ -2.68
TY1B-PR3P0C2J1 MPC1YGL080W 393 nt-1.67□□□□□ -2.68
TY1B-PR3P0C2J1 YOL166W-AYOL166W-A 156 nt-1.67□□□□□ -2.68
TY1B-PR3P0C2J1 YBL039C-AYBL039C-A 84 nt-1.68□□□□□ -2.68
TY1B-PR3P0C2J1 snR50snR50 90 nt-1.7□□□□□ -2.68
TY1B-PR3P0C2J1 YLR202CYLR202C 327 nt-1.7□□□□□ -2.68
TY1B-PR3P0C2J1 YBR126W-BYBR126W-B 144 nt-1.7□□□□□ -2.68
TY1B-PR3P0C2J1 HMRA1YCR097W 381 nt-1.71□□□□□ -2.68
TY1B-PR3P0C2J1 YER137W-AYER137W-A 306 nt-1.71□□□□□ -2.68
TY1B-PR3P0C2J1 YGR240C-AYGR240C-A 201 nt-1.71□□□□□ -2.68
TY1B-PR3P0C2J1 YDL158CYDL158C 309 nt-1.72□□□□□ -2.69
TY1B-PR3P0C2J1 RDS3YPR094W 324 nt-1.72□□□□□ -2.69
TY1B-PR3P0C2J1 CSN9YDR179C 489 nt-1.73□□□□□ -2.69
TY1B-PR3P0C2J1 EAF6YJR082C 342 nt-1.73□□□□□ -2.69
TY1B-PR3P0C2J1 YDR102CYDR102C 333 nt-1.75□□□□□ -2.69
TY1B-PR3P0C2J1 YML054C-AYML054C-A 159 nt-1.75□□□□□ -2.69
TY1B-PR3P0C2J1 snR69snR69 101 nt-1.76□□□□□ -2.69
TY1B-PR3P0C2J1 YML099W-AYML099W-A 330 nt-1.78□□□□□ -2.69
TY1B-PR3P0C2J1 snR67snR67 82 nt-1.79□□□□□ -2.7
TY1B-PR3P0C2J1 YOR293C-AYOR293C-A 150 nt-1.82□□□□□ -2.7
TY1B-PR3P0C2J1 YOL038C-AYOL038C-A 96 nt-1.82□□□□□ -2.7
TY1B-PR3P0C2J1 tD(GUC)QtD(GUC)Q 75 nt-1.83□□□□□ -2.7
TY1B-PR3P0C2J1 YBR182C-AYBR182C-A 195 nt-1.83□□□□□ -2.7
TY1B-PR3P0C2J1 YER097WYER097W 330 nt-1.84□□□□□ -2.7
TY1B-PR3P0C2J1 YFL032WYFL032W 321 nt-1.84□□□□□ -2.7
TY1B-PR3P0C2J1 YNL028WYNL028W 318 nt-1.84□□□□□ -2.7
TY1B-PR3P0C2J1 snR39BsnR39B 96 nt-1.84□□□□□ -2.7
TY1B-PR3P0C2J1 snR60snR60 104 nt-1.85□□□□□ -2.71
TY1B-PR3P0C2J1 YFL019CYFL019C 354 nt-1.86□□□□□ -2.71
TY1B-PR3P0C2J1 YBR196C-AYBR196C-A 150 nt-1.86□□□□□ -2.71
TY1B-PR3P0C2J1 YDR048CYDR048C 315 nt-1.87□□□□□ -2.71
TY1B-PR3P0C2J1 YGR146C-AYGR146C-A 162 nt-1.9□□□□□ -2.71
TY1B-PR3P0C2J1 YMR001C-AYMR001C-A 231 nt-1.9□□□□□ -2.71
TY1B-PR3P0C2J1 YNL324WYNL324W 396 nt-1.9□□□□□ -2.71
TY1B-PR3P0C2J1 YDR543CYDR543C 300 nt-1.92□□□□□ -2.72
TY1B-PR3P0C2J1 YAL068W-AYAL068W-A 255 nt-1.92□□□□□ -2.72
TY1B-PR3P0C2J1 STE18YJR086W 333 nt-1.93□□□□□ -2.72
TY1B-PR3P0C2J1 YLR342W-AYLR342W-A 174 nt-1.93□□□□□ -2.72
TY1B-PR3P0C2J1 YOR008C-AYOR008C-A 225 nt-1.93□□□□□ -2.72
TY1B-PR3P0C2J1 YLR434CYLR434C 384 nt-1.93□□□□□ -2.72
TY1B-PR3P0C2J1 ATP6Q0085 780 nt-1.94□□□□□ -2.72
TY1B-PR3P0C2J1 YKL063CYKL063C 504 nt-1.94□□□□□ -2.72
TY1B-PR3P0C2J1 Q0142Q0142 177 nt-1.95□□□□□ -2.72
TY1B-PR3P0C2J1 YOL013W-BYOL013W-B 291 nt-1.97□□□□□ -2.72
TY1B-PR3P0C2J1 YMR315W-AYMR315W-A 108 nt-1.98□□□□□ -2.73
TY1B-PR3P0C2J1 snR41snR41 95 nt-1.98□□□□□ -2.73
TY1B-PR3P0C2J1 tM(CAU)Q2tM(CAU)Q2 78 nt-1.99□□□□□ -2.73
TY1B-PR3P0C2J1 YLR406C-AYLR406C-A 150 nt-2□□□□□ -2.73
TY1B-PR3P0C2J1 YAL016C-BYAL016C-B 186 nt-2.01□□□□□ -2.73
TY1B-PR3P0C2J1 YDL159C-BYDL159C-B 177 nt-2.02□□□□□ -2.73
TY1B-PR3P0C2J1 YMR172C-AYMR172C-A 384 nt-2.03□□□□□ -2.73
TY1B-PR3P0C2J1 YOR309CYOR309C 381 nt-2.03□□□□□ -2.73
Retrieved 100 of 7,029 protein–RNA pairs in 71.5 ms