Protein–RNA interactions for Protein: P02381

VAR1, Ribosomal protein VAR1, mitochondrial, yeastyeast

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VAR1P02381 YER053C-AYER053C-A 114 nt0.13□□□□□ -2.39
VAR1P02381 YNL146WYNL146W 303 nt0.13□□□□□ -2.39
VAR1P02381 THO2YNL139C 4794 nt0.13□□□□□ -2.39
VAR1P02381 HAL9YOL089C 3093 nt0.12□□□□□ -2.39
VAR1P02381 RCO1YMR075W 2055 nt0.12□□□□□ -2.39
VAR1P02381 TRS65YGR166W 1683 nt0.12□□□□□ -2.39
VAR1P02381 YDR413CYDR413C 576 nt0.12□□□□□ -2.39
VAR1P02381 ATP6Q0085 780 nt0.12□□□□□ -2.39
VAR1P02381 YEL020C-BYEL020C-B 198 nt0.12□□□□□ -2.39
VAR1P02381 YFL063WYFL063W 456 nt0.12□□□□□ -2.39
VAR1P02381 YGL149WYGL149W 306 nt0.12□□□□□ -2.39
VAR1P02381 YPL038W-AYPL038W-A 192 nt0.12□□□□□ -2.39
VAR1P02381 YLL006W-AYLL006W-A 177 nt0.11□□□□□ -2.39
VAR1P02381 YNL028WYNL028W 318 nt0.11□□□□□ -2.39
VAR1P02381 NIP1YMR309C 2439 nt0.11□□□□□ -2.39
VAR1P02381 YCR038W-AYCR038W-A 126 nt0.1□□□□□ -2.39
VAR1P02381 YDR183C-AYDR183C-A 258 nt0.1□□□□□ -2.39
VAR1P02381 GIM4YEL003W 336 nt0.1□□□□□ -2.39
VAR1P02381 BLI1YKL061W 342 nt0.1□□□□□ -2.39
VAR1P02381 RAD61YDR014W 1944 nt0.09□□□□□ -2.39
VAR1P02381 YDL240C-AYDL240C-A 138 nt0.09□□□□□ -2.4
VAR1P02381 COX12YLR038C 252 nt0.09□□□□□ -2.4
VAR1P02381 YLR120W-AYLR120W-A 102 nt0.09□□□□□ -2.4
VAR1P02381 YOR072W-BYOR072W-B 162 nt0.09□□□□□ -2.4
VAR1P02381 SNU13YEL026W 381 nt0.08□□□□□ -2.4
VAR1P02381 YEL073CYEL073C 324 nt0.08□□□□□ -2.4
VAR1P02381 YER097WYER097W 330 nt0.08□□□□□ -2.4
VAR1P02381 YHR131W-AYHR131W-A 246 nt0.08□□□□□ -2.4
VAR1P02381 YOL013W-AYOL013W-A 192 nt0.08□□□□□ -2.4
VAR1P02381 YDR366CYDR366C 399 nt0.07□□□□□ -2.4
VAR1P02381 YLR041WYLR041W 321 nt0.07□□□□□ -2.4
VAR1P02381 YGL052WYGL052W 306 nt0.06□□□□□ -2.4
VAR1P02381 YHR175W-AYHR175W-A 150 nt0.06□□□□□ -2.4
VAR1P02381 YOL014WYOL014W 375 nt0.06□□□□□ -2.4
VAR1P02381 BUL2YML111W 2763 nt0.05□□□□□ -2.4
VAR1P02381 YKL118WYKL118W 312 nt0.05□□□□□ -2.4
VAR1P02381 YMR172C-AYMR172C-A 384 nt0.05□□□□□ -2.4
VAR1P02381 YBR072C-AYBR072C-A 162 nt0.05□□□□□ -2.4
VAR1P02381 HMRA1YCR097W 381 nt0.04□□□□□ -2.4
VAR1P02381 YDR544CYDR544C 429 nt0.04□□□□□ -2.4
VAR1P02381 tR(ACG)Q2tR(ACG)Q2 74 nt0.03□□□□□ -2.4
VAR1P02381 YPR010C-AYPR010C-A 219 nt0.03□□□□□ -2.4
VAR1P02381 YKU70YMR284W 1809 nt0.03□□□□□ -2.4
VAR1P02381 MLP2YIL149C 5040 nt0.03□□□□□ -2.41
VAR1P02381 snR56snR56 88 nt0.02□□□□□ -2.41
VAR1P02381 QCR9YGR183C 201 nt0.01□□□□□ -2.41
VAR1P02381 YKL100W-AYKL100W-A 90 nt0.01□□□□□ -2.41
VAR1P02381 CSE1YGL238W 2883 nt0.01□□□□□ -2.41
VAR1P02381 SDH6YDR379C-A 240 nt0□□□□□ -2.41
VAR1P02381 YIL002W-AYIL002W-A 210 nt0□□□□□ -2.41
VAR1P02381 APQ12YIL040W 417 nt0□□□□□ -2.41
VAR1P02381 YMR158W-BYMR158W-B 321 nt0□□□□□ -2.41
VAR1P02381 MLP1YKR095W 5628 nt-0.01□□□□□ -2.41
VAR1P02381 YER078W-AYER078W-A 165 nt-0.01□□□□□ -2.41
VAR1P02381 YNL277W-AYNL277W-A 189 nt-0.01□□□□□ -2.41
VAR1P02381 UTP8YGR128C 2142 nt-0.02□□□□□ -2.41
VAR1P02381 TAH1YCR060W 336 nt-0.02□□□□□ -2.41
VAR1P02381 YLR232WYLR232W 348 nt-0.02□□□□□ -2.41
VAR1P02381 SOV1YMR066W 2697 nt-0.02□□□□□ -2.41
VAR1P02381 YOR186C-AYOR186C-A 210 nt-0.03□□□□□ -2.41
VAR1P02381 YIR030W-AYIR030W-A 384 nt-0.04□□□□□ -2.42
VAR1P02381 RPL39YJL189W 156 nt-0.04□□□□□ -2.42
VAR1P02381 YBR131C-AYBR131C-A 90 nt-0.04□□□□□ -2.42
VAR1P02381 YGL041CYGL041C 204 nt-0.05□□□□□ -2.42
VAR1P02381 YOR008C-AYOR008C-A 225 nt-0.05□□□□□ -2.42
VAR1P02381 YEL014CYEL014C 306 nt-0.06□□□□□ -2.42
VAR1P02381 tF(GAA)QtF(GAA)Q 75 nt-0.07□□□□□ -2.42
VAR1P02381 snR128snR128 126 nt-0.07□□□□□ -2.42
VAR1P02381 YBR099CYBR099C 384 nt-0.07□□□□□ -2.42
VAR1P02381 EST1YLR233C 2100 nt-0.07□□□□□ -2.42
VAR1P02381 YBL039C-AYBL039C-A 84 nt-0.08□□□□□ -2.42
VAR1P02381 YBR182C-AYBR182C-A 195 nt-0.08□□□□□ -2.42
VAR1P02381 PRP39YML046W 1890 nt-0.08□□□□□ -2.42
VAR1P02381 GLG1YKR058W 1851 nt-0.09□□□□□ -2.42
VAR1P02381 COG6YNL041C 2520 nt-0.09□□□□□ -2.42
VAR1P02381 snR45snR45 172 nt-0.1□□□□□ -2.43
VAR1P02381 snR55snR55 98 nt-0.12□□□□□ -2.43
VAR1P02381 YDR524W-CYDR524W-C 90 nt-0.12□□□□□ -2.43
VAR1P02381 YML099W-AYML099W-A 330 nt-0.12□□□□□ -2.43
VAR1P02381 snR8snR8 190 nt-0.13□□□□□ -2.43
VAR1P02381 YJL182CYJL182C 318 nt-0.13□□□□□ -2.43
VAR1P02381 YGL182CYGL182C 324 nt-0.14□□□□□ -2.43
VAR1P02381 snR49snR49 165 nt-0.14□□□□□ -2.43
VAR1P02381 snR65snR65 100 nt-0.15□□□□□ -2.43
VAR1P02381 YOR302WYOR302W 78 nt-0.15□□□□□ -2.43
VAR1P02381 YDR210WYDR210W 228 nt-0.16□□□□□ -2.44
VAR1P02381 YOR314W-AYOR314W-A 111 nt-0.16□□□□□ -2.44
VAR1P02381 YPL152W-AYPL152W-A 99 nt-0.16□□□□□ -2.44
VAR1P02381 YER181CYER181C 324 nt-0.18□□□□□ -2.44
VAR1P02381 YGR164WYGR164W 336 nt-0.18□□□□□ -2.44
VAR1P02381 YOL155W-AYOL155W-A 135 nt-0.18□□□□□ -2.44
VAR1P02381 YNL097C-BYNL097C-B 123 nt-0.19□□□□□ -2.44
VAR1P02381 YOR231C-AYOR231C-A 201 nt-0.2□□□□□ -2.44
VAR1P02381 YOR381W-AYOR381W-A 168 nt-0.2□□□□□ -2.44
VAR1P02381 snR80snR80 171 nt-0.21□□□□□ -2.44
VAR1P02381 SBH2YER019C-A 267 nt-0.22□□□□□ -2.44
VAR1P02381 TFB5YDR079C-A 219 nt-0.25□□□□□ -2.45
VAR1P02381 YGL188C-AYGL188C-A 141 nt-0.25□□□□□ -2.45
VAR1P02381 snR39BsnR39B 96 nt-0.25□□□□□ -2.45
VAR1P02381 YOR329W-AYOR329W-A 210 nt-0.26□□□□□ -2.45
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms