Protein–RNA interactions for Protein: P00560

PGK1, Phosphoglycerate kinase, yeastyeast

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PGK1P00560 RSM22YKL155C 1887 nt1.47□□□□□ -2.17
PGK1P00560 RCO1YMR075W 2055 nt1.47□□□□□ -2.17
PGK1P00560 TBS1YBR150C 3285 nt1.46□□□□□ -2.18
PGK1P00560 YAR009CYAR009C 3591 nt1.46□□□□□ -2.18
PGK1P00560 IML1YJR138W 4755 nt1.46□□□□□ -2.18
PGK1P00560 YLR422WYLR422W 5799 nt1.46□□□□□ -2.18
PGK1P00560 EMC5YIL027C 426 nt1.45□□□□□ -2.18
PGK1P00560 MMS4YBR098W 2076 nt1.44□□□□□ -2.18
PGK1P00560 COX5BYIL111W 456 nt1.44□□□□□ -2.18
PGK1P00560 CDC25YLR310C 4770 nt1.44□□□□□ -2.18
PGK1P00560 ALY2YJL084C 3141 nt1.44□□□□□ -2.18
PGK1P00560 SMC1YFL008W 3678 nt1.43□□□□□ -2.18
PGK1P00560 SKI3YPR189W 4299 nt1.43□□□□□ -2.18
PGK1P00560 HKR1YDR420W 5409 nt1.42□□□□□ -2.18
PGK1P00560 SEC21YNL287W 2808 nt1.42□□□□□ -2.18
PGK1P00560 PAN2YGL094C 3348 nt1.41□□□□□ -2.18
PGK1P00560 GEA2YEL022W 4380 nt1.41□□□□□ -2.18
PGK1P00560 STF2YGR008C 255 nt1.41□□□□□ -2.18
PGK1P00560 YKL100W-AYKL100W-A 90 nt1.41□□□□□ -2.18
PGK1P00560 KCS1YDR017C 3153 nt1.41□□□□□ -2.18
PGK1P00560 SXM1YDR395W 2835 nt1.41□□□□□ -2.18
PGK1P00560 YML002WYML002W 2214 nt1.4□□□□□ -2.18
PGK1P00560 PIK1YNL267W 3201 nt1.4□□□□□ -2.19
PGK1P00560 KAP122YGL016W 3246 nt1.39□□□□□ -2.19
PGK1P00560 STO1YMR125W 2586 nt1.39□□□□□ -2.19
PGK1P00560 tM(CAU)Q2tM(CAU)Q2 78 nt1.39□□□□□ -2.19
PGK1P00560 FYV10YIL097W 1551 nt1.38□□□□□ -2.19
PGK1P00560 TRM732YMR259C 4263 nt1.38□□□□□ -2.19
PGK1P00560 COG6YNL041C 2520 nt1.38□□□□□ -2.19
PGK1P00560 YIL142C-AYIL142C-A 333 nt1.38□□□□□ -2.19
PGK1P00560 SET3YKR029C 2256 nt1.37□□□□□ -2.19
PGK1P00560 NOP9YJL010C 2001 nt1.37□□□□□ -2.19
PGK1P00560 YDR210WYDR210W 228 nt1.36□□□□□ -2.19
PGK1P00560 YLR041WYLR041W 321 nt1.36□□□□□ -2.19
PGK1P00560 tS(GCU)Q1tS(GCU)Q1 86 nt1.35□□□□□ -2.19
PGK1P00560 YLR232WYLR232W 348 nt1.34□□□□□ -2.19
PGK1P00560 snR190snR190 190 nt1.34□□□□□ -2.19
PGK1P00560 ASE1YOR058C 2658 nt1.34□□□□□ -2.2
PGK1P00560 BST1YFL025C 3090 nt1.34□□□□□ -2.2
PGK1P00560 WAR1YML076C 2835 nt1.34□□□□□ -2.2
PGK1P00560 snR81snR81 201 nt1.33□□□□□ -2.2
PGK1P00560 tV(UAC)BtV(UAC)B 74 nt1.33□□□□□ -2.2
PGK1P00560 tV(UAC)DtV(UAC)D 74 nt1.33□□□□□ -2.2
PGK1P00560 HUG1YML058W-A 207 nt1.33□□□□□ -2.2
PGK1P00560 KAP120YPL125W 3099 nt1.32□□□□□ -2.2
PGK1P00560 YJL127W-AYJL127W-A 117 nt1.32□□□□□ -2.2
PGK1P00560 SIP4YJL089W 2490 nt1.31□□□□□ -2.2
PGK1P00560 YLL066W-BYLL066W-B 171 nt1.3□□□□□ -2.2
PGK1P00560 NUP188YML103C 4968 nt1.29□□□□□ -2.2
PGK1P00560 snR45snR45 172 nt1.29□□□□□ -2.2
PGK1P00560 APL3YBL037W 3078 nt1.28□□□□□ -2.2
PGK1P00560 BIR1YJR089W 2865 nt1.28□□□□□ -2.2
PGK1P00560 SEC1YDR164C 2175 nt1.27□□□□□ -2.21
PGK1P00560 RPL26BYGR034W 384 nt1.27□□□□□ -2.21
PGK1P00560 YNL266WYNL266W 420 nt1.27□□□□□ -2.21
PGK1P00560 MYO1YHR023W 5787 nt1.27□□□□□ -2.21
PGK1P00560 RAD9YDR217C 3930 nt1.27□□□□□ -2.21
PGK1P00560 YBR072C-AYBR072C-A 162 nt1.26□□□□□ -2.21
PGK1P00560 SWI4YER111C 3282 nt1.25□□□□□ -2.21
PGK1P00560 AZF1YOR113W 2745 nt1.24□□□□□ -2.21
PGK1P00560 YGR146C-AYGR146C-A 162 nt1.23□□□□□ -2.21
PGK1P00560 YBR200W-AYBR200W-A 165 nt1.23□□□□□ -2.21
PGK1P00560 EST2YLR318W 2655 nt1.23□□□□□ -2.21
PGK1P00560 CDC39YCR093W 6327 nt1.22□□□□□ -2.21
PGK1P00560 YAL037C-AYAL037C-A 93 nt1.22□□□□□ -2.21
PGK1P00560 SPT7YBR081C 3999 nt1.22□□□□□ -2.21
PGK1P00560 MSN5YDR335W 3675 nt1.21□□□□□ -2.22
PGK1P00560 tN(GUU)QtN(GUU)Q 71 nt1.21□□□□□ -2.22
PGK1P00560 YOL083C-AYOL083C-A 141 nt1.21□□□□□ -2.22
PGK1P00560 SEC3YER008C 4011 nt1.19□□□□□ -2.22
PGK1P00560 YNL284C-BYNL284C-B 5268 nt1.19□□□□□ -2.22
PGK1P00560 YCS4YLR272C 3531 nt1.18□□□□□ -2.22
PGK1P00560 PRP16YKR086W 3216 nt1.18□□□□□ -2.22
PGK1P00560 VAM6YDL077C 3150 nt1.16□□□□□ -2.22
PGK1P00560 NUP145YGL092W 3954 nt1.16□□□□□ -2.22
PGK1P00560 YBL071C-BYBL071C-B 99 nt1.16□□□□□ -2.22
PGK1P00560 YDL073WYDL073W 2955 nt1.16□□□□□ -2.22
PGK1P00560 UBP3YER151C 2739 nt1.16□□□□□ -2.22
PGK1P00560 NST1YNL091W 3723 nt1.15□□□□□ -2.22
PGK1P00560 SEC8YPR055W 3198 nt1.15□□□□□ -2.23
PGK1P00560 BEM3YPL115C 3387 nt1.15□□□□□ -2.23
PGK1P00560 NNF2YGR089W 2811 nt1.14□□□□□ -2.23
PGK1P00560 snR62snR62 100 nt1.14□□□□□ -2.23
PGK1P00560 ROM2YLR371W 4071 nt1.13□□□□□ -2.23
PGK1P00560 SCC2YDR180W 4482 nt1.13□□□□□ -2.23
PGK1P00560 YPR160W-AYPR160W-A 81 nt1.13□□□□□ -2.23
PGK1P00560 YBR196C-AYBR196C-A 150 nt1.13□□□□□ -2.23
PGK1P00560 BUD3YCL014W 4911 nt1.13□□□□□ -2.23
PGK1P00560 DOP1YDR141C 5097 nt1.13□□□□□ -2.23
PGK1P00560 YLR399W-AYLR399W-A 105 nt1.11□□□□□ -2.23
PGK1P00560 CLU1YMR012W 3834 nt1.1□□□□□ -2.23
PGK1P00560 YPR117WYPR117W 7470 nt1.1□□□□□ -2.23
PGK1P00560 RPS26AYGL189C 360 nt1.09□□□□□ -2.23
PGK1P00560 SEC10YLR166C 2616 nt1.09□□□□□ -2.24
PGK1P00560 BEM2YER155C 6504 nt1.06□□□□□ -2.24
PGK1P00560 YDR034C-AYDR034C-A 177 nt1.05□□□□□ -2.24
PGK1P00560 YOL164W-AYOL164W-A 183 nt1.05□□□□□ -2.24
PGK1P00560 YJR029WYJR029W 5268 nt1.05□□□□□ -2.24
PGK1P00560 YPR137C-BYPR137C-B 5268 nt1.05□□□□□ -2.24
PGK1P00560 YSP1YHR155W 3687 nt1.04□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 109.5 ms