Protein–RNA interactions for Protein: P00445

SOD1, Superoxide dismutase [Cu-Zn], yeastyeast

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SOD1P00445 YBR200W-AYBR200W-A 165 nt0.95□□□□□ -2.26
SOD1P00445 NOP9YJL010C 2001 nt0.94□□□□□ -2.26
SOD1P00445 NST1YNL091W 3723 nt0.94□□□□□ -2.26
SOD1P00445 TAH1YCR060W 336 nt0.94□□□□□ -2.26
SOD1P00445 PAN2YGL094C 3348 nt0.94□□□□□ -2.26
SOD1P00445 FYV10YIL097W 1551 nt0.94□□□□□ -2.26
SOD1P00445 TRM732YMR259C 4263 nt0.94□□□□□ -2.26
SOD1P00445 COX5BYIL111W 456 nt0.93□□□□□ -2.26
SOD1P00445 YBL039C-AYBL039C-A 84 nt0.93□□□□□ -2.26
SOD1P00445 snR190snR190 190 nt0.93□□□□□ -2.26
SOD1P00445 MSN5YDR335W 3675 nt0.93□□□□□ -2.26
SOD1P00445 YJR029WYJR029W 5268 nt0.92□□□□□ -2.26
SOD1P00445 YPR137C-BYPR137C-B 5268 nt0.92□□□□□ -2.26
SOD1P00445 QCR9YGR183C 201 nt0.92□□□□□ -2.26
SOD1P00445 YLL020CYLL020C 306 nt0.92□□□□□ -2.26
SOD1P00445 RAD9YDR217C 3930 nt0.92□□□□□ -2.26
SOD1P00445 YNL067W-BYNL067W-B 141 nt0.91□□□□□ -2.26
SOD1P00445 SWI4YER111C 3282 nt0.91□□□□□ -2.26
SOD1P00445 RPL26BYGR034W 384 nt0.9□□□□□ -2.27
SOD1P00445 VAM6YDL077C 3150 nt0.9□□□□□ -2.27
SOD1P00445 PRP16YKR086W 3216 nt0.89□□□□□ -2.27
SOD1P00445 EST2YLR318W 2655 nt0.89□□□□□ -2.27
SOD1P00445 YCR095W-AYCR095W-A 159 nt0.89□□□□□ -2.27
SOD1P00445 SIP4YJL089W 2490 nt0.89□□□□□ -2.27
SOD1P00445 BUD3YCL014W 4911 nt0.88□□□□□ -2.27
SOD1P00445 YLR232WYLR232W 348 nt0.88□□□□□ -2.27
SOD1P00445 YBR099CYBR099C 384 nt0.88□□□□□ -2.27
SOD1P00445 ROM2YLR371W 4071 nt0.87□□□□□ -2.27
SOD1P00445 STB6YKL072W 2301 nt0.87□□□□□ -2.27
SOD1P00445 SOM1YEL059C-A 225 nt0.87□□□□□ -2.27
SOD1P00445 tM(CAU)Q2tM(CAU)Q2 78 nt0.87□□□□□ -2.27
SOD1P00445 NUP145YGL092W 3954 nt0.86□□□□□ -2.27
SOD1P00445 BEM2YER155C 6504 nt0.86□□□□□ -2.27
SOD1P00445 PMP2YEL017C-A 132 nt0.86□□□□□ -2.27
SOD1P00445 snR39BsnR39B 96 nt0.86□□□□□ -2.27
SOD1P00445 IML1YJR138W 4755 nt0.86□□□□□ -2.27
SOD1P00445 SPT7YBR081C 3999 nt0.85□□□□□ -2.27
SOD1P00445 YHR131W-AYHR131W-A 246 nt0.85□□□□□ -2.27
SOD1P00445 YGR130CYGR130C 2451 nt0.84□□□□□ -2.27
SOD1P00445 BEM3YPL115C 3387 nt0.84□□□□□ -2.27
SOD1P00445 tV(UAC)BtV(UAC)B 74 nt0.84□□□□□ -2.27
SOD1P00445 tV(UAC)DtV(UAC)D 74 nt0.84□□□□□ -2.27
SOD1P00445 YIL071W-AYIL071W-A 477 nt0.84□□□□□ -2.27
SOD1P00445 CDC39YCR093W 6327 nt0.84□□□□□ -2.28
SOD1P00445 YLR422WYLR422W 5799 nt0.83□□□□□ -2.28
SOD1P00445 ASE1YOR058C 2658 nt0.83□□□□□ -2.28
SOD1P00445 OST4YDL232W 111 nt0.83□□□□□ -2.28
SOD1P00445 YDR210WYDR210W 228 nt0.83□□□□□ -2.28
SOD1P00445 tN(GUU)QtN(GUU)Q 71 nt0.82□□□□□ -2.28
SOD1P00445 YNL103W-AYNL103W-A 90 nt0.82□□□□□ -2.28
SOD1P00445 YDL073WYDL073W 2955 nt0.82□□□□□ -2.28
SOD1P00445 FIG2YCR089W 4830 nt0.81□□□□□ -2.28
SOD1P00445 YJL127W-AYJL127W-A 117 nt0.81□□□□□ -2.28
SOD1P00445 SCC2YDR180W 4482 nt0.8□□□□□ -2.28
SOD1P00445 EMT1tM(CAU)D 73 nt0.8□□□□□ -2.28
SOD1P00445 EMT5tM(CAU)J1 73 nt0.8□□□□□ -2.28
SOD1P00445 EMT3tM(CAU)J2 73 nt0.8□□□□□ -2.28
SOD1P00445 EMT4tM(CAU)M 73 nt0.8□□□□□ -2.28
SOD1P00445 EMT2tM(CAU)O2 73 nt0.8□□□□□ -2.28
SOD1P00445 YLR041WYLR041W 321 nt0.8□□□□□ -2.28
SOD1P00445 SEC8YPR055W 3198 nt0.79□□□□□ -2.28
SOD1P00445 TFB5YDR079C-A 219 nt0.78□□□□□ -2.28
SOD1P00445 DOP1YDR141C 5097 nt0.77□□□□□ -2.29
SOD1P00445 COG6YNL041C 2520 nt0.77□□□□□ -2.29
SOD1P00445 RKR1YMR247C 4689 nt0.76□□□□□ -2.29
SOD1P00445 SEC3YER008C 4011 nt0.75□□□□□ -2.29
SOD1P00445 UBP3YER151C 2739 nt0.75□□□□□ -2.29
SOD1P00445 YDR524C-AYDR524C-A 120 nt0.75□□□□□ -2.29
SOD1P00445 YPR160W-AYPR160W-A 81 nt0.75□□□□□ -2.29
SOD1P00445 YBL109WYBL109W 336 nt0.74□□□□□ -2.29
SOD1P00445 YPR117WYPR117W 7470 nt0.73□□□□□ -2.29
SOD1P00445 YLR399W-AYLR399W-A 105 nt0.73□□□□□ -2.29
SOD1P00445 PAU24YBR301W 363 nt0.73□□□□□ -2.29
SOD1P00445 CLU1YMR012W 3834 nt0.72□□□□□ -2.29
SOD1P00445 SEC1YDR164C 2175 nt0.72□□□□□ -2.29
SOD1P00445 YBR072C-AYBR072C-A 162 nt0.72□□□□□ -2.29
SOD1P00445 KAP120YPL125W 3099 nt0.71□□□□□ -2.3
SOD1P00445 YCS4YLR272C 3531 nt0.71□□□□□ -2.3
SOD1P00445 CSE1YGL238W 2883 nt0.69□□□□□ -2.3
SOD1P00445 snR61snR61 90 nt0.69□□□□□ -2.3
SOD1P00445 YGR146C-AYGR146C-A 162 nt0.69□□□□□ -2.3
SOD1P00445 YMR326CYMR326C 309 nt0.69□□□□□ -2.3
SOD1P00445 YOR192C-BYOR192C-B 5313 nt0.69□□□□□ -2.3
SOD1P00445 RCO1YMR075W 2055 nt0.68□□□□□ -2.3
SOD1P00445 YGL041C-BYGL041C-B 183 nt0.68□□□□□ -2.3
SOD1P00445 YLL006W-AYLL006W-A 177 nt0.67□□□□□ -2.3
SOD1P00445 YBR178WYBR178W 375 nt0.67□□□□□ -2.3
SOD1P00445 BIR1YJR089W 2865 nt0.67□□□□□ -2.3
SOD1P00445 YSP1YHR155W 3687 nt0.66□□□□□ -2.3
SOD1P00445 YNL266WYNL266W 420 nt0.66□□□□□ -2.3
SOD1P00445 STF2YGR008C 255 nt0.65□□□□□ -2.31
SOD1P00445 HUG1YML058W-A 207 nt0.64□□□□□ -2.31
SOD1P00445 GLG1YKR058W 1851 nt0.63□□□□□ -2.31
SOD1P00445 NNF2YGR089W 2811 nt0.63□□□□□ -2.31
SOD1P00445 YHR217CYHR217C 462 nt0.59□□□□□ -2.31
SOD1P00445 NIP1YMR309C 2439 nt0.59□□□□□ -2.32
SOD1P00445 YIL142C-AYIL142C-A 333 nt0.58□□□□□ -2.32
SOD1P00445 YOL083C-AYOL083C-A 141 nt0.58□□□□□ -2.32
SOD1P00445 YBR196C-AYBR196C-A 150 nt0.58□□□□□ -2.32
SOD1P00445 ULP2YIL031W 3105 nt0.58□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 47.9 ms