Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 SNORA71D-201ENST00000363484 134 ntBASIC8.99□□□□□ -0.971e-323■■■□□ 15.5
DKC1O60832 RPS3-213ENST00000529285 550 ntTSL 523.02■■□□□ 1.285e-21■■■□□ 15.5
DKC1O60832 RPS3-206ENST00000526248 771 ntTSL 517.74■□□□□ 0.435e-21■■■□□ 15.5
DKC1O60832 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.63■□□□□ 0.255e-21■■■□□ 15.5
DKC1O60832 RPS3-212ENST00000529173 1373 ntTSL 514.66□□□□□ -0.065e-21■■■□□ 15.5
DKC1O60832 RPS3-216ENST00000530721 796 ntTSL 314.39□□□□□ -0.115e-21■■■□□ 15.5
DKC1O60832 RPS3-218ENST00000532872 737 ntTSL 314.39□□□□□ -0.115e-21■■■□□ 15.5
DKC1O60832 RPS3-209ENST00000527446 1306 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.135e-21■■■□□ 15.5
DKC1O60832 RPS3-217ENST00000531188 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.275e-21■■■□□ 15.5
DKC1O60832 RPS3-202ENST00000422465 903 ntTSL 211.26□□□□□ -0.615e-21■■■□□ 15.5
DKC1O60832 RPS3-210ENST00000528439 473 ntTSL 311.12□□□□□ -0.635e-21■■■□□ 15.5
DKC1O60832 RPS3-219ENST00000534440 564 ntTSL 2 BASIC11.12□□□□□ -0.635e-21■■■□□ 15.5
DKC1O60832 RPS3-203ENST00000524851 866 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.665e-21■■■□□ 15.5
DKC1O60832 RPS3-207ENST00000526608 710 ntTSL 5 BASIC10□□□□□ -0.815e-21■■■□□ 15.5
DKC1O60832 SNORD19B-201ENST00000459623 84 ntBASIC0.98□□□□□ -2.255e-22■■■□□ 15.4
DKC1O60832 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.57■■□□□ 1.041e-8■■■□□ 15.3
DKC1O60832 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.721e-8■■■□□ 15.3
DKC1O60832 BCR-204ENST00000427791 771 ntTSL 1 (best)14.5□□□□□ -0.091e-8■■■□□ 15.3
DKC1O60832 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.225e-42■■■□□ 15.3
DKC1O60832 RPL17-202ENST00000578532 684 ntTSL 221.57■■□□□ 1.045e-42■■■□□ 15.3
DKC1O60832 RPL17-218ENST00000583637 758 ntTSL 321.57■■□□□ 1.045e-42■■■□□ 15.3
DKC1O60832 RPL17-223ENST00000618613 856 ntAPPRIS P1 TSL 318.86■□□□□ 0.615e-42■■■□□ 15.3
DKC1O60832 RPL17-C18orf32-201ENST00000332968 948 ntTSL 5 BASIC13.78□□□□□ -0.25e-42■■■□□ 15.3
DKC1O60832 RPL17-224ENST00000618619 747 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.575e-42■■■□□ 15.3
DKC1O60832 RPL17-207ENST00000580210 705 ntTSL 2 BASIC11.08□□□□□ -0.645e-42■■■□□ 15.3
DKC1O60832 RPL17-205ENST00000579408 859 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.685e-42■■■□□ 15.3
DKC1O60832 RPL17-212ENST00000581373 584 ntTSL 2 BASIC9.79□□□□□ -0.845e-42■■■□□ 15.3
DKC1O60832 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.095e-42■■■□□ 15.3
DKC1O60832 SNORD42A-201ENST00000459584 64 ntBASIC2.77□□□□□ -1.973e-35■■■□□ 15.2
DKC1O60832 TCF25-226ENST00000640279 2688 ntTSL 516.63■□□□□ 0.252e-6■■■□□ 15.2
DKC1O60832 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.05■□□□□ 0.642e-9■■■□□ 15.2
DKC1O60832 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.632e-9■■■□□ 15.2
DKC1O60832 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.162e-9■■■□□ 15.2
DKC1O60832 ASCC2-209ENST00000458594 2753 ntTSL 512.37□□□□□ -0.432e-9■■■□□ 15.2
DKC1O60832 SNORA71A-201ENST00000364729 134 ntBASIC10.64□□□□□ -0.711e-323■■■□□ 15.1
DKC1O60832 ABAT-207ENST00000563992 1870 ntTSL 214.96□□□□□ -0.017e-7■■■□□ 15.1
DKC1O60832 ABAT-201ENST00000268251 4836 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.157e-7■■■□□ 15.1
DKC1O60832 ABAT-209ENST00000564714 466 ntTSL 313.65□□□□□ -0.227e-7■■■□□ 15.1
DKC1O60832 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.977e-10■■■□□ 15.1
DKC1O60832 DAAM1-209ENST00000556596 2844 ntTSL 1 (best)7.45□□□□□ -1.227e-10■■■□□ 15.1
DKC1O60832 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC7.14□□□□□ -1.277e-10■■■□□ 15.1
DKC1O60832 MAGI1-205ENST00000464060 2247 ntTSL 1 (best)25.49■■□□□ 1.671e-6■■■□□ 15
DKC1O60832 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.521e-6■■■□□ 15
DKC1O60832 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.351e-6■■■□□ 15
DKC1O60832 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.251e-6■■■□□ 15
DKC1O60832 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.13■□□□□ 0.171e-6■■■□□ 15
DKC1O60832 RPL27A-207ENST00000530585 577 ntTSL 210.79□□□□□ -0.681e-323■■■□□ 15
DKC1O60832 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC7.54□□□□□ -1.21e-323■■■□□ 15
DKC1O60832 SNORA3A-201ENST00000364113 130 ntBASIC2.59□□□□□ -1.991e-323■■■□□ 15
DKC1O60832 ST3GAL2-204ENST00000566097 904 ntTSL 230.99■■■□□ 2.556e-6■■■□□ 15
DKC1O60832 RPS7-205ENST00000462576 907 ntTSL 1 (best)29.51■■■□□ 2.316e-6■■■□□ 15
DKC1O60832 RPS7-209ENST00000491937 987 ntTSL 229.51■■■□□ 2.316e-6■■■□□ 15
DKC1O60832 ST3GAL2-205ENST00000567586 557 ntTSL 428.14■■■□□ 2.16e-6■■■□□ 15
DKC1O60832 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.862e-8■■■□□ 15
DKC1O60832 CREB3L2-206ENST00000468127 596 ntTSL 324.79■■□□□ 1.562e-8■■■□□ 15
DKC1O60832 C9orf3-208ENST00000451893 514 ntTSL 324.29■■□□□ 1.486e-6■■■□□ 15
DKC1O60832 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.42■■□□□ 1.346e-6■■■□□ 15
DKC1O60832 BAMBI-202ENST00000497699 1884 ntTSL 223.36■■□□□ 1.332e-8■■■□□ 15
DKC1O60832 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.16e-6■■■□□ 15
DKC1O60832 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.76■■□□□ 1.076e-6■■■□□ 15
DKC1O60832 PPP2R5C-207ENST00000553730 1227 ntTSL 221.4■■□□□ 1.026e-6■■■□□ 15
DKC1O60832 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.992e-8■■■□□ 15
DKC1O60832 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.916e-6■■■□□ 15
DKC1O60832 MBTPS2-203ENST00000465888 1862 ntTSL 220.51■□□□□ 0.876e-6■■■□□ 15
DKC1O60832 FAM193B-209ENST00000507212 717 ntTSL 219.69■□□□□ 0.746e-6■■■□□ 15
DKC1O60832 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.54■□□□□ 0.726e-6■■■□□ 15
DKC1O60832 FAM193B-219ENST00000524677 1916 ntTSL 219.53■□□□□ 0.726e-6■■■□□ 15
DKC1O60832 ST3GAL2-203ENST00000561708 581 ntTSL 419.26■□□□□ 0.676e-6■■■□□ 15
DKC1O60832 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.646e-6■■■□□ 15
DKC1O60832 FAM193B-204ENST00000505569 1870 ntTSL 1 (best)18.94■□□□□ 0.626e-6■■■□□ 15
DKC1O60832 AC006449.6-201ENST00000612330 2296 ntBASIC18.06■□□□□ 0.486e-6■■■□□ 15
DKC1O60832 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.03■□□□□ 0.486e-6■■■□□ 15
DKC1O60832 FAM193B-208ENST00000506955 4604 ntTSL 1 (best)18.03■□□□□ 0.486e-6■■■□□ 15
DKC1O60832 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.95■□□□□ 0.466e-6■■■□□ 15
DKC1O60832 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.88■□□□□ 0.456e-6■■■□□ 15
DKC1O60832 RPS7-208ENST00000481006 5429 ntTSL 1 (best)17.74■□□□□ 0.436e-6■■■□□ 15
DKC1O60832 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.14■□□□□ 0.336e-6■■■□□ 15
DKC1O60832 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.336e-6■■■□□ 15
DKC1O60832 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.06■□□□□ 0.326e-6■■■□□ 15
DKC1O60832 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.99■□□□□ 0.314e-16■■■□□ 15
DKC1O60832 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.75■□□□□ 0.274e-16■■■□□ 15
DKC1O60832 ADGRD1-209ENST00000540207 718 ntTSL 316.73■□□□□ 0.276e-6■■■□□ 15
DKC1O60832 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.72■□□□□ 0.274e-16■■■□□ 15
DKC1O60832 CLCN6-204ENST00000376491 927 ntTSL 1 (best)16.71■□□□□ 0.276e-6■■■□□ 15
DKC1O60832 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.252e-8■■■□□ 15
DKC1O60832 FAM193B-215ENST00000513282 651 ntTSL 316.53■□□□□ 0.246e-6■■■□□ 15
DKC1O60832 FAM193B-212ENST00000510163 2237 ntTSL 1 (best)16.45■□□□□ 0.226e-6■■■□□ 15
DKC1O60832 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.42■□□□□ 0.226e-6■■■□□ 15
DKC1O60832 CLCN6-203ENST00000376490 963 ntTSL 1 (best)15.98■□□□□ 0.156e-6■■■□□ 15
DKC1O60832 FAM193B-202ENST00000504130 394 ntTSL 515.81■□□□□ 0.126e-6■■■□□ 15
DKC1O60832 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.112e-8■■■□□ 15
DKC1O60832 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC15.58■□□□□ 0.096e-6■■■□□ 15
DKC1O60832 PPP2R5C-227ENST00000557268 2013 ntTSL 215.58■□□□□ 0.086e-6■■■□□ 15
DKC1O60832 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.064e-16■■■□□ 15
DKC1O60832 ADGRD1-204ENST00000446583 5529 ntTSL 515.42■□□□□ 0.066e-6■■■□□ 15
DKC1O60832 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC15.09■□□□□ 0.016e-6■■■□□ 15
DKC1O60832 CYB5R3-207ENST00000466276 581 ntTSL 414.91□□□□□ -0.024e-16■■■□□ 15
DKC1O60832 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.032e-8■■■□□ 15
DKC1O60832 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.046e-6■■■□□ 15
DKC1O60832 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.056e-6■■■□□ 15
Retrieved 100 of 8,567 protein–RNA pairs in 411.4 ms