Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.46■□□□□ 0.71
SNAP47Q5SQN1 AL023875.1-201ENST00000640777 796 ntBASIC19.46■□□□□ 0.71
SNAP47Q5SQN1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
SNAP47Q5SQN1 AF106564.1-201ENST00000607058 2553 ntBASIC19.46■□□□□ 0.71
SNAP47Q5SQN1 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.46■□□□□ 0.71
SNAP47Q5SQN1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.46■□□□□ 0.71
SNAP47Q5SQN1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SNAP47Q5SQN1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNAP47Q5SQN1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNAP47Q5SQN1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNAP47Q5SQN1 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SNAP47Q5SQN1 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNAP47Q5SQN1 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.45■□□□□ 0.7
SNAP47Q5SQN1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.45■□□□□ 0.7
SNAP47Q5SQN1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNAP47Q5SQN1 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SNAP47Q5SQN1 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
SNAP47Q5SQN1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.45■□□□□ 0.7
SNAP47Q5SQN1 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.45■□□□□ 0.7
SNAP47Q5SQN1 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SNAP47Q5SQN1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.45■□□□□ 0.7
SNAP47Q5SQN1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNAP47Q5SQN1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNAP47Q5SQN1 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNAP47Q5SQN1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNAP47Q5SQN1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNAP47Q5SQN1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.44■□□□□ 0.7
SNAP47Q5SQN1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNAP47Q5SQN1 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.44■□□□□ 0.7
SNAP47Q5SQN1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNAP47Q5SQN1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNAP47Q5SQN1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNAP47Q5SQN1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNAP47Q5SQN1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SNAP47Q5SQN1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNAP47Q5SQN1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SNAP47Q5SQN1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SNAP47Q5SQN1 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.44■□□□□ 0.7
SNAP47Q5SQN1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SNAP47Q5SQN1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNAP47Q5SQN1 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.44■□□□□ 0.7
SNAP47Q5SQN1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.44■□□□□ 0.7
SNAP47Q5SQN1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.44■□□□□ 0.7
SNAP47Q5SQN1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNAP47Q5SQN1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SNAP47Q5SQN1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNAP47Q5SQN1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNAP47Q5SQN1 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNAP47Q5SQN1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNAP47Q5SQN1 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNAP47Q5SQN1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNAP47Q5SQN1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNAP47Q5SQN1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNAP47Q5SQN1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNAP47Q5SQN1 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNAP47Q5SQN1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNAP47Q5SQN1 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNAP47Q5SQN1 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
SNAP47Q5SQN1 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.43■□□□□ 0.7
SNAP47Q5SQN1 MIR718-201ENST00000390190 70 ntBASIC19.43■□□□□ 0.7
SNAP47Q5SQN1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNAP47Q5SQN1 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.43■□□□□ 0.7
SNAP47Q5SQN1 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNAP47Q5SQN1 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.43■□□□□ 0.7
SNAP47Q5SQN1 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNAP47Q5SQN1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.43■□□□□ 0.7
SNAP47Q5SQN1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNAP47Q5SQN1 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNAP47Q5SQN1 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNAP47Q5SQN1 MIR2861-201ENST00000636310 90 ntBASIC19.43■□□□□ 0.7
SNAP47Q5SQN1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.43■□□□□ 0.7
SNAP47Q5SQN1 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SNAP47Q5SQN1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SNAP47Q5SQN1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNAP47Q5SQN1 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNAP47Q5SQN1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SNAP47Q5SQN1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.43■□□□□ 0.7
SNAP47Q5SQN1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.43■□□□□ 0.7
SNAP47Q5SQN1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNAP47Q5SQN1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.42■□□□□ 0.7
SNAP47Q5SQN1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.42■□□□□ 0.7
SNAP47Q5SQN1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNAP47Q5SQN1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNAP47Q5SQN1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SNAP47Q5SQN1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.42■□□□□ 0.7
SNAP47Q5SQN1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNAP47Q5SQN1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.42■□□□□ 0.7
SNAP47Q5SQN1 AC239809.2-201ENST00000415381 517 ntBASIC19.42■□□□□ 0.7
SNAP47Q5SQN1 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNAP47Q5SQN1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.42■□□□□ 0.7
SNAP47Q5SQN1 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.42■□□□□ 0.7
SNAP47Q5SQN1 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.42■□□□□ 0.7
SNAP47Q5SQN1 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.42■□□□□ 0.7
SNAP47Q5SQN1 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SNAP47Q5SQN1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.42■□□□□ 0.7
SNAP47Q5SQN1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNAP47Q5SQN1 FEM1AP4-201ENST00000443167 1987 ntBASIC19.42■□□□□ 0.7
SNAP47Q5SQN1 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.42■□□□□ 0.7
SNAP47Q5SQN1 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNAP47Q5SQN1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms