Protein–RNA interactions for Protein: Q08773

ISW2, ISWI chromatin-remodeling complex ATPase ISW2, yeastyeast

Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ISW2Q08773 RDS3YPR094W 324 nt3.79□□□□□ -1.8
ISW2Q08773 SMC3YJL074C 3693 nt3.78□□□□□ -1.8
ISW2Q08773 AUS1YOR011W 4185 nt3.78□□□□□ -1.8
ISW2Q08773 SPC110YDR356W 2835 nt3.77□□□□□ -1.81
ISW2Q08773 TOF1YNL273W 3717 nt3.77□□□□□ -1.81
ISW2Q08773 TUS1YLR425W 3924 nt3.77□□□□□ -1.81
ISW2Q08773 tF(GAA)DtF(GAA)D 73 nt3.77□□□□□ -1.81
ISW2Q08773 tF(GAA)NtF(GAA)N 73 nt3.77□□□□□ -1.81
ISW2Q08773 YPR160W-AYPR160W-A 81 nt3.77□□□□□ -1.81
ISW2Q08773 GCN1YGL195W 8019 nt3.77□□□□□ -1.81
ISW2Q08773 CIN8YEL061C 3003 nt3.76□□□□□ -1.81
ISW2Q08773 NUP100YKL068W 2880 nt3.76□□□□□ -1.81
ISW2Q08773 snR69snR69 101 nt3.76□□□□□ -1.81
ISW2Q08773 NMD2YHR077C 3270 nt3.73□□□□□ -1.81
ISW2Q08773 YOR296WYOR296W 3870 nt3.72□□□□□ -1.81
ISW2Q08773 YEL025CYEL025C 3567 nt3.72□□□□□ -1.81
ISW2Q08773 YOR055WYOR055W 435 nt3.72□□□□□ -1.81
ISW2Q08773 snR14snR14 160 nt3.72□□□□□ -1.81
ISW2Q08773 GYP5YPL249C 2685 nt3.71□□□□□ -1.82
ISW2Q08773 NST1YNL091W 3723 nt3.71□□□□□ -1.82
ISW2Q08773 NUT1YGL151W 3399 nt3.71□□□□□ -1.82
ISW2Q08773 SSN2YDR443C 4263 nt3.7□□□□□ -1.82
ISW2Q08773 YAR009CYAR009C 3591 nt3.7□□□□□ -1.82
ISW2Q08773 BMS1YPL217C 3552 nt3.69□□□□□ -1.82
ISW2Q08773 PMR1YGL167C 2853 nt3.69□□□□□ -1.82
ISW2Q08773 POL2YNL262W 6669 nt3.69□□□□□ -1.82
ISW2Q08773 DRS2YAL026C 4068 nt3.68□□□□□ -1.82
ISW2Q08773 STT4YLR305C 5703 nt3.68□□□□□ -1.82
ISW2Q08773 YEF3YLR249W 3135 nt3.68□□□□□ -1.82
ISW2Q08773 ESL1YIL151C 3357 nt3.67□□□□□ -1.82
ISW2Q08773 YDR209CYDR209C 414 nt3.67□□□□□ -1.82
ISW2Q08773 YPL060C-AYPL060C-A 3315 nt3.67□□□□□ -1.82
ISW2Q08773 NAB6YML117W 3405 nt3.67□□□□□ -1.82
ISW2Q08773 BUL2YML111W 2763 nt3.67□□□□□ -1.82
ISW2Q08773 PDR1YGL013C 3207 nt3.66□□□□□ -1.82
ISW2Q08773 RSE1YML049C 4086 nt3.66□□□□□ -1.82
ISW2Q08773 TFC3YAL001C 3483 nt3.66□□□□□ -1.82
ISW2Q08773 SYH1YPL105C 2550 nt3.65□□□□□ -1.82
ISW2Q08773 YIL169CYIL169C 2988 nt3.64□□□□□ -1.83
ISW2Q08773 TCB2YNL087W 3537 nt3.63□□□□□ -1.83
ISW2Q08773 snR40snR40 97 nt3.62□□□□□ -1.83
ISW2Q08773 SIR4YDR227W 4077 nt3.61□□□□□ -1.83
ISW2Q08773 AMS1YGL156W 3252 nt3.61□□□□□ -1.83
ISW2Q08773 IRE1YHR079C 3348 nt3.6□□□□□ -1.83
ISW2Q08773 tQ(UUG)BtQ(UUG)B 72 nt3.6□□□□□ -1.83
ISW2Q08773 BPT1YLL015W 4680 nt3.6□□□□□ -1.83
ISW2Q08773 RPA190YOR341W 4995 nt3.59□□□□□ -1.83
ISW2Q08773 YDR464C-AYDR464C-A 189 nt3.59□□□□□ -1.83
ISW2Q08773 STO1YMR125W 2586 nt3.59□□□□□ -1.83
ISW2Q08773 STU1YBL034C 4542 nt3.59□□□□□ -1.84
ISW2Q08773 RTT101YJL047C 2529 nt3.59□□□□□ -1.84
ISW2Q08773 YJL052C-AYJL052C-A 120 nt3.58□□□□□ -1.84
ISW2Q08773 CSE1YGL238W 2883 nt3.58□□□□□ -1.84
ISW2Q08773 CSR2YPR030W 3366 nt3.57□□□□□ -1.84
ISW2Q08773 SPO14YKR031C 5052 nt3.56□□□□□ -1.84
ISW2Q08773 MSB2YGR014W 3921 nt3.55□□□□□ -1.84
ISW2Q08773 ULP2YIL031W 3105 nt3.54□□□□□ -1.84
ISW2Q08773 HSL1YKL101W 4557 nt3.54□□□□□ -1.84
ISW2Q08773 YOR343W-BYOR343W-B 5313 nt3.53□□□□□ -1.84
ISW2Q08773 FLO1YAR050W 4614 nt3.53□□□□□ -1.84
ISW2Q08773 SXM1YDR395W 2835 nt3.52□□□□□ -1.85
ISW2Q08773 SSD1YDR293C 3753 nt3.51□□□□□ -1.85
ISW2Q08773 MSH6YDR097C 3729 nt3.5□□□□□ -1.85
ISW2Q08773 HIR3YJR140C 4947 nt3.49□□□□□ -1.85
ISW2Q08773 YDL114W-AYDL114W-A 114 nt3.49□□□□□ -1.85
ISW2Q08773 UBR1YGR184C 5853 nt3.49□□□□□ -1.85
ISW2Q08773 YIL082W-AYIL082W-A 4497 nt3.48□□□□□ -1.85
ISW2Q08773 TDA9YML081W 3756 nt3.48□□□□□ -1.85
ISW2Q08773 YPL216WYPL216W 3309 nt3.48□□□□□ -1.85
ISW2Q08773 RIF1YBR275C 5751 nt3.47□□□□□ -1.85
ISW2Q08773 YSP2YDR326C 4317 nt3.46□□□□□ -1.86
ISW2Q08773 CHC1YGL206C 4962 nt3.46□□□□□ -1.86
ISW2Q08773 RGC1YPR115W 3252 nt3.45□□□□□ -1.86
ISW2Q08773 MSB1YOR188W 3414 nt3.44□□□□□ -1.86
ISW2Q08773 KOG1YHR186C 4674 nt3.43□□□□□ -1.86
ISW2Q08773 RPN1YHR027C 2982 nt3.43□□□□□ -1.86
ISW2Q08773 PET309YLR067C 2898 nt3.41□□□□□ -1.86
ISW2Q08773 tV(UAC)QtV(UAC)Q 76 nt3.41□□□□□ -1.86
ISW2Q08773 DGR1YNL130C-A 147 nt3.41□□□□□ -1.86
ISW2Q08773 tN(GUU)QtN(GUU)Q 71 nt3.4□□□□□ -1.87
ISW2Q08773 KIP1YBL063W 3336 nt3.39□□□□□ -1.87
ISW2Q08773 RAD50YNL250W 3939 nt3.39□□□□□ -1.87
ISW2Q08773 SEC7YDR170C 6030 nt3.39□□□□□ -1.87
ISW2Q08773 MSH3YCR092C 3057 nt3.38□□□□□ -1.87
ISW2Q08773 YSP1YHR155W 3687 nt3.38□□□□□ -1.87
ISW2Q08773 YCS4YLR272C 3531 nt3.38□□□□□ -1.87
ISW2Q08773 IRC20YLR247C 4671 nt3.38□□□□□ -1.87
ISW2Q08773 UTP21YLR409C 2820 nt3.38□□□□□ -1.87
ISW2Q08773 YLR422WYLR422W 5799 nt3.37□□□□□ -1.87
ISW2Q08773 PRP16YKR086W 3216 nt3.37□□□□□ -1.87
ISW2Q08773 STH1YIL126W 4080 nt3.37□□□□□ -1.87
ISW2Q08773 SEC8YPR055W 3198 nt3.37□□□□□ -1.87
ISW2Q08773 PAU12YGR294W 363 nt3.36□□□□□ -1.87
ISW2Q08773 DYN1YKR054C 12279 nt3.35□□□□□ -1.87
ISW2Q08773 ILS1YBL076C 3219 nt3.33□□□□□ -1.88
ISW2Q08773 YJL077W-AYJL077W-A 87 nt3.33□□□□□ -1.88
ISW2Q08773 SEC3YER008C 4011 nt3.32□□□□□ -1.88
ISW2Q08773 MOT1YPL082C 5604 nt3.32□□□□□ -1.88
ISW2Q08773 HUG1YML058W-A 207 nt3.3□□□□□ -1.88
ISW2Q08773 CAT8YMR280C 4302 nt3.3□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 71.3 ms