Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 BEM3YPL115C 3387 nt0.35□□□□□ -2.35
RRP40Q08285 COX5BYIL111W 456 nt0.34□□□□□ -2.36
RRP40Q08285 YPL205CYPL205C 345 nt0.34□□□□□ -2.36
RRP40Q08285 YPR160W-AYPR160W-A 81 nt0.33□□□□□ -2.36
RRP40Q08285 SEC8YPR055W 3198 nt0.33□□□□□ -2.36
RRP40Q08285 PRP5YBR237W 2550 nt0.32□□□□□ -2.36
RRP40Q08285 YHL046W-AYHL046W-A 327 nt0.32□□□□□ -2.36
RRP40Q08285 ABF2YMR072W 552 nt0.32□□□□□ -2.36
RRP40Q08285 PET111YMR257C 2403 nt0.32□□□□□ -2.36
RRP40Q08285 AI1Q0050 2505 nt0.31□□□□□ -2.36
RRP40Q08285 YAL067W-AYAL067W-A 228 nt0.31□□□□□ -2.36
RRP40Q08285 YPL225WYPL225W 441 nt0.31□□□□□ -2.36
RRP40Q08285 CSN9YDR179C 489 nt0.3□□□□□ -2.36
RRP40Q08285 YJL120WYJL120W 324 nt0.3□□□□□ -2.36
RRP40Q08285 TAR1YLR154W-C 375 nt0.3□□□□□ -2.36
RRP40Q08285 RPS25BYLR333C 327 nt0.3□□□□□ -2.36
RRP40Q08285 IQG1YPL242C 4488 nt0.29□□□□□ -2.36
RRP40Q08285 OST4YDL232W 111 nt0.29□□□□□ -2.36
RRP40Q08285 SBH1YER087C-B 249 nt0.29□□□□□ -2.36
RRP40Q08285 YBL100W-BYBL100W-B 5313 nt0.29□□□□□ -2.36
RRP40Q08285 YLR202CYLR202C 327 nt0.28□□□□□ -2.36
RRP40Q08285 YLR399W-AYLR399W-A 105 nt0.28□□□□□ -2.36
RRP40Q08285 SGF11YPL047W 300 nt0.28□□□□□ -2.36
RRP40Q08285 Q0017Q0017 162 nt0.28□□□□□ -2.36
RRP40Q08285 VIK1YPL253C 1944 nt0.26□□□□□ -2.37
RRP40Q08285 MLP1YKR095W 5628 nt0.26□□□□□ -2.37
RRP40Q08285 YOR192C-BYOR192C-B 5313 nt0.26□□□□□ -2.37
RRP40Q08285 YBR285WYBR285W 435 nt0.26□□□□□ -2.37
RRP40Q08285 PRP42YDR235W 1635 nt0.26□□□□□ -2.37
RRP40Q08285 YER079WYER079W 633 nt0.25□□□□□ -2.37
RRP40Q08285 YMR321CYMR321C 318 nt0.25□□□□□ -2.37
RRP40Q08285 PRM3YPL192C 402 nt0.25□□□□□ -2.37
RRP40Q08285 YAR029WYAR029W 225 nt0.24□□□□□ -2.37
RRP40Q08285 snR190snR190 190 nt0.24□□□□□ -2.37
RRP40Q08285 ESP1YGR098C 4893 nt0.23□□□□□ -2.37
RRP40Q08285 YDL185C-AYDL185C-A 228 nt0.23□□□□□ -2.37
RRP40Q08285 YER137W-AYER137W-A 306 nt0.23□□□□□ -2.37
RRP40Q08285 YHR007C-AYHR007C-A 216 nt0.23□□□□□ -2.37
RRP40Q08285 YHR138CYHR138C 345 nt0.23□□□□□ -2.37
RRP40Q08285 YNL324WYNL324W 396 nt0.23□□□□□ -2.37
RRP40Q08285 YOR121CYOR121C 306 nt0.23□□□□□ -2.37
RRP40Q08285 YMR307C-AYMR307C-A 195 nt0.22□□□□□ -2.37
RRP40Q08285 YOR345CYOR345C 351 nt0.21□□□□□ -2.38
RRP40Q08285 LEE1YPL054W 906 nt0.21□□□□□ -2.38
RRP40Q08285 HTB2YBL002W 396 nt0.2□□□□□ -2.38
RRP40Q08285 YCR018C-AYCR018C-A 255 nt0.19□□□□□ -2.38
RRP40Q08285 AGA2YGL032C 264 nt0.19□□□□□ -2.38
RRP40Q08285 MLP2YIL149C 5040 nt0.19□□□□□ -2.38
RRP40Q08285 THO2YNL139C 4794 nt0.18□□□□□ -2.38
RRP40Q08285 YDR371C-AYDR371C-A 105 nt0.18□□□□□ -2.38
RRP40Q08285 tN(GUU)QtN(GUU)Q 71 nt0.18□□□□□ -2.38
RRP40Q08285 YAR053WYAR053W 297 nt0.18□□□□□ -2.38
RRP40Q08285 YNL054W-BYNL054W-B 5250 nt0.18□□□□□ -2.38
RRP40Q08285 RPL35AYDL191W 363 nt0.17□□□□□ -2.38
RRP40Q08285 YJR157WYJR157W 363 nt0.17□□□□□ -2.38
RRP40Q08285 SSS1YDR086C 243 nt0.16□□□□□ -2.38
RRP40Q08285 YLR264C-AYLR264C-A 117 nt0.16□□□□□ -2.38
RRP40Q08285 RPS26AYGL189C 360 nt0.15□□□□□ -2.39
RRP40Q08285 YOL013W-AYOL013W-A 192 nt0.15□□□□□ -2.39
RRP40Q08285 ORC3YLL004W 1851 nt0.15□□□□□ -2.39
RRP40Q08285 NNF2YGR089W 2811 nt0.14□□□□□ -2.39
RRP40Q08285 YDR354C-AYDR354C-A 144 nt0.14□□□□□ -2.39
RRP40Q08285 RCO1YMR075W 2055 nt0.14□□□□□ -2.39
RRP40Q08285 YER078W-AYER078W-A 165 nt0.13□□□□□ -2.39
RRP40Q08285 tW(UCA)QtW(UCA)Q 74 nt0.13□□□□□ -2.39
RRP40Q08285 YMR001C-AYMR001C-A 231 nt0.13□□□□□ -2.39
RRP40Q08285 COG8YML071C 1824 nt0.11□□□□□ -2.39
RRP40Q08285 ULI1YFR026C 510 nt0.11□□□□□ -2.39
RRP40Q08285 YLR282CYLR282C 342 nt0.11□□□□□ -2.39
RRP40Q08285 YCR022CYCR022C 345 nt0.1□□□□□ -2.39
RRP40Q08285 YJL026C-AYJL026C-A 222 nt0.1□□□□□ -2.39
RRP40Q08285 YKL136WYKL136W 399 nt0.1□□□□□ -2.39
RRP40Q08285 YAL068W-AYAL068W-A 255 nt0.1□□□□□ -2.39
RRP40Q08285 YOR293C-AYOR293C-A 150 nt0.1□□□□□ -2.39
RRP40Q08285 NIP1YMR309C 2439 nt0.09□□□□□ -2.39
RRP40Q08285 YIL115W-AYIL115W-A 372 nt0.09□□□□□ -2.4
RRP40Q08285 COX12YLR038C 252 nt0.09□□□□□ -2.4
RRP40Q08285 YNL146WYNL146W 303 nt0.09□□□□□ -2.4
RRP40Q08285 BUL2YML111W 2763 nt0.09□□□□□ -2.4
RRP40Q08285 YDR048CYDR048C 315 nt0.08□□□□□ -2.4
RRP40Q08285 RPS27BYHR021C 249 nt0.08□□□□□ -2.4
RRP40Q08285 BIL1YOR304C-A 231 nt0.08□□□□□ -2.4
RRP40Q08285 COY1YKL179C 2040 nt0.08□□□□□ -2.4
RRP40Q08285 YPR092WYPR092W 306 nt0.07□□□□□ -2.4
RRP40Q08285 CSE2YNR010W 450 nt0.04□□□□□ -2.4
RRP40Q08285 YLL006W-AYLL006W-A 177 nt0.03□□□□□ -2.4
RRP40Q08285 YEL020C-BYEL020C-B 198 nt0.02□□□□□ -2.41
RRP40Q08285 YGR035CYGR035C 351 nt0.02□□□□□ -2.41
RRP40Q08285 YAL063C-AYAL063C-A 291 nt0.02□□□□□ -2.41
RRP40Q08285 YOR161W-AYOR161W-A 81 nt0.02□□□□□ -2.41
RRP40Q08285 YGL123C-AYGL123C-A 231 nt0.01□□□□□ -2.41
RRP40Q08285 YHR131W-AYHR131W-A 246 nt0.01□□□□□ -2.41
RRP40Q08285 YLR154W-FYLR154W-F 141 nt0.01□□□□□ -2.41
RRP40Q08285 YOR186C-AYOR186C-A 210 nt0.01□□□□□ -2.41
RRP40Q08285 YLR041WYLR041W 321 nt0□□□□□ -2.41
RRP40Q08285 YKU70YMR284W 1809 nt-0.01□□□□□ -2.41
RRP40Q08285 YEL073CYEL073C 324 nt-0.03□□□□□ -2.41
RRP40Q08285 YFL063WYFL063W 456 nt-0.03□□□□□ -2.41
RRP40Q08285 YKL100W-AYKL100W-A 90 nt-0.03□□□□□ -2.41
RRP40Q08285 BLI1YKL061W 342 nt-0.04□□□□□ -2.42
Retrieved 100 of 7,029 protein–RNA pairs in 60.9 ms