Protein–RNA interactions for Protein: Q07988

YLR040C, Cell wall protein YLR040C, yeastyeast

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YLR040CQ07988 RPL37BYDR500C 267 nt1.9□□□□□ -2.11
YLR040CQ07988 FRK1YPL141C 2598 nt1.9□□□□□ -2.11
YLR040CQ07988 YNL144CYNL144C 2223 nt1.89□□□□□ -2.11
YLR040CQ07988 FAB1YFR019W 6837 nt1.89□□□□□ -2.11
YLR040CQ07988 TUS1YLR425W 3924 nt1.88□□□□□ -2.11
YLR040CQ07988 YGL182CYGL182C 324 nt1.88□□□□□ -2.11
YLR040CQ07988 LHS1YKL073W 2646 nt1.88□□□□□ -2.11
YLR040CQ07988 UTP8YGR128C 2142 nt1.87□□□□□ -2.11
YLR040CQ07988 MDS3YGL197W 4464 nt1.87□□□□□ -2.11
YLR040CQ07988 ADR1YDR216W 3972 nt1.87□□□□□ -2.11
YLR040CQ07988 PDR8YLR266C 2106 nt1.87□□□□□ -2.11
YLR040CQ07988 ATG9YDL149W 2994 nt1.86□□□□□ -2.11
YLR040CQ07988 YCR087C-AYCR087C-A 462 nt1.86□□□□□ -2.11
YLR040CQ07988 STF2YGR008C 255 nt1.86□□□□□ -2.11
YLR040CQ07988 TMA7YLR262C-A 195 nt1.86□□□□□ -2.11
YLR040CQ07988 MGA2YIR033W 3342 nt1.86□□□□□ -2.11
YLR040CQ07988 RTT107YHR154W 3213 nt1.86□□□□□ -2.11
YLR040CQ07988 YDL206WYDL206W 2289 nt1.86□□□□□ -2.11
YLR040CQ07988 NEO1YIL048W 3456 nt1.84□□□□□ -2.11
YLR040CQ07988 FIG2YCR089W 4830 nt1.84□□□□□ -2.11
YLR040CQ07988 SEC31YDL195W 3822 nt1.84□□□□□ -2.11
YLR040CQ07988 UBR2YLR024C 5619 nt1.84□□□□□ -2.12
YLR040CQ07988 HER1YOR227W 3741 nt1.83□□□□□ -2.12
YLR040CQ07988 YGL123C-AYGL123C-A 231 nt1.83□□□□□ -2.12
YLR040CQ07988 QCR9YGR183C 201 nt1.83□□□□□ -2.12
YLR040CQ07988 YIL142C-AYIL142C-A 333 nt1.83□□□□□ -2.12
YLR040CQ07988 YLL020CYLL020C 306 nt1.83□□□□□ -2.12
YLR040CQ07988 YAL067W-AYAL067W-A 228 nt1.83□□□□□ -2.12
YLR040CQ07988 HSL1YKL101W 4557 nt1.83□□□□□ -2.12
YLR040CQ07988 HIR3YJR140C 4947 nt1.83□□□□□ -2.12
YLR040CQ07988 YER172C-AYER172C-A 381 nt1.82□□□□□ -2.12
YLR040CQ07988 GYP5YPL249C 2685 nt1.81□□□□□ -2.12
YLR040CQ07988 UFD2YDL190C 2886 nt1.8□□□□□ -2.12
YLR040CQ07988 BFR2YDR299W 1605 nt1.8□□□□□ -2.12
YLR040CQ07988 STB6YKL072W 2301 nt1.8□□□□□ -2.12
YLR040CQ07988 SFB2YNL049C 2631 nt1.8□□□□□ -2.12
YLR040CQ07988 YOR093CYOR093C 4947 nt1.8□□□□□ -2.12
YLR040CQ07988 YBL039C-AYBL039C-A 84 nt1.8□□□□□ -2.12
YLR040CQ07988 YMR045CYMR045C 5268 nt1.8□□□□□ -2.12
YLR040CQ07988 YHR131W-AYHR131W-A 246 nt1.79□□□□□ -2.12
YLR040CQ07988 SPO24YPR036W-A 204 nt1.79□□□□□ -2.12
YLR040CQ07988 SEY1YOR165W 2331 nt1.79□□□□□ -2.12
YLR040CQ07988 MSH6YDR097C 3729 nt1.79□□□□□ -2.12
YLR040CQ07988 snR39BsnR39B 96 nt1.78□□□□□ -2.12
YLR040CQ07988 GCN2YDR283C 4980 nt1.78□□□□□ -2.12
YLR040CQ07988 DNF3YMR162C 4971 nt1.78□□□□□ -2.13
YLR040CQ07988 MYO2YOR326W 4725 nt1.78□□□□□ -2.13
YLR040CQ07988 RSM22YKL155C 1887 nt1.77□□□□□ -2.13
YLR040CQ07988 YKL100W-AYKL100W-A 90 nt1.77□□□□□ -2.13
YLR040CQ07988 YOR161W-AYOR161W-A 81 nt1.77□□□□□ -2.13
YLR040CQ07988 SEC63YOR254C 1992 nt1.77□□□□□ -2.13
YLR040CQ07988 UTP21YLR409C 2820 nt1.76□□□□□ -2.13
YLR040CQ07988 KIP1YBL063W 3336 nt1.76□□□□□ -2.13
YLR040CQ07988 COA6YMR244C-A 315 nt1.76□□□□□ -2.13
YLR040CQ07988 BPH1YCR032W 6504 nt1.75□□□□□ -2.13
YLR040CQ07988 TAH1YCR060W 336 nt1.74□□□□□ -2.13
YLR040CQ07988 tS(GCU)Q1tS(GCU)Q1 86 nt1.74□□□□□ -2.13
YLR040CQ07988 COX5BYIL111W 456 nt1.74□□□□□ -2.13
YLR040CQ07988 TRM3YDL112W 4311 nt1.73□□□□□ -2.13
YLR040CQ07988 POL5YEL055C 3069 nt1.73□□□□□ -2.13
YLR040CQ07988 TBS1YBR150C 3285 nt1.73□□□□□ -2.13
YLR040CQ07988 RAD50YNL250W 3939 nt1.73□□□□□ -2.13
YLR040CQ07988 SMC1YFL008W 3678 nt1.73□□□□□ -2.13
YLR040CQ07988 MYO4YAL029C 4416 nt1.72□□□□□ -2.13
YLR040CQ07988 RCO1YMR075W 2055 nt1.72□□□□□ -2.13
YLR040CQ07988 tM(CAU)Q2tM(CAU)Q2 78 nt1.72□□□□□ -2.13
YLR040CQ07988 YLR422WYLR422W 5799 nt1.72□□□□□ -2.13
YLR040CQ07988 YLL066W-BYLL066W-B 171 nt1.71□□□□□ -2.14
YLR040CQ07988 EAF1YDR359C 2949 nt1.71□□□□□ -2.14
YLR040CQ07988 NUT1YGL151W 3399 nt1.71□□□□□ -2.14
YLR040CQ07988 RTP1YMR185W 2946 nt1.7□□□□□ -2.14
YLR040CQ07988 MMS4YBR098W 2076 nt1.7□□□□□ -2.14
YLR040CQ07988 NUP157YER105C 4176 nt1.69□□□□□ -2.14
YLR040CQ07988 YJR039WYJR039W 3366 nt1.68□□□□□ -2.14
YLR040CQ07988 YML002WYML002W 2214 nt1.68□□□□□ -2.14
YLR040CQ07988 tT(UGU)HtT(UGU)H 72 nt1.68□□□□□ -2.14
YLR040CQ07988 snR45snR45 172 nt1.68□□□□□ -2.14
YLR040CQ07988 PAN2YGL094C 3348 nt1.68□□□□□ -2.14
YLR040CQ07988 PKH3YDR466W 2697 nt1.68□□□□□ -2.14
YLR040CQ07988 ALY2YJL084C 3141 nt1.67□□□□□ -2.14
YLR040CQ07988 EMC5YIL027C 426 nt1.67□□□□□ -2.14
YLR040CQ07988 YMR247W-AYMR247W-A 144 nt1.67□□□□□ -2.14
YLR040CQ07988 YAR009CYAR009C 3591 nt1.67□□□□□ -2.14
YLR040CQ07988 SEC21YNL287W 2808 nt1.66□□□□□ -2.14
YLR040CQ07988 TDA9YML081W 3756 nt1.66□□□□□ -2.14
YLR040CQ07988 snR81snR81 201 nt1.65□□□□□ -2.15
YLR040CQ07988 SLX4YLR135W 2247 nt1.64□□□□□ -2.15
YLR040CQ07988 ANS1YHR126C 480 nt1.64□□□□□ -2.15
YLR040CQ07988 YMR272W-BYMR272W-B 108 nt1.63□□□□□ -2.15
YLR040CQ07988 PMD1YER132C 5262 nt1.63□□□□□ -2.15
YLR040CQ07988 SMC4YLR086W 4257 nt1.62□□□□□ -2.15
YLR040CQ07988 YLR419WYLR419W 4308 nt1.62□□□□□ -2.15
YLR040CQ07988 YJL127W-AYJL127W-A 117 nt1.62□□□□□ -2.15
YLR040CQ07988 YLR232WYLR232W 348 nt1.62□□□□□ -2.15
YLR040CQ07988 snR14snR14 160 nt1.62□□□□□ -2.15
YLR040CQ07988 FYV10YIL097W 1551 nt1.62□□□□□ -2.15
YLR040CQ07988 NUP192YJL039C 5052 nt1.62□□□□□ -2.15
YLR040CQ07988 IRC20YLR247C 4671 nt1.61□□□□□ -2.15
YLR040CQ07988 KAP120YPL125W 3099 nt1.6□□□□□ -2.15
YLR040CQ07988 YDR210WYDR210W 228 nt1.6□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 18.7 ms