Protein–RNA interactions for Protein: Q07478

SUB2, ATP-dependent RNA helicase SUB2, yeastyeast

Known RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB2Q07478 SMC1YFL008W 3678 nt2.3□□□□□ -2.04
SUB2Q07478 YCR038W-AYCR038W-A 126 nt2.3□□□□□ -2.04
SUB2Q07478 YHL015W-AYHL015W-A 84 nt2.3□□□□□ -2.04
SUB2Q07478 YIL002W-AYIL002W-A 210 nt2.3□□□□□ -2.04
SUB2Q07478 Q0143Q0143 153 nt2.29□□□□□ -2.04
SUB2Q07478 UFD4YKL010C 4452 nt2.28□□□□□ -2.04
SUB2Q07478 YKL100W-AYKL100W-A 90 nt2.28□□□□□ -2.04
SUB2Q07478 YAR009CYAR009C 3591 nt2.28□□□□□ -2.04
SUB2Q07478 CDC25YLR310C 4770 nt2.27□□□□□ -2.05
SUB2Q07478 USO1YDL058W 5373 nt2.27□□□□□ -2.05
SUB2Q07478 SMC4YLR086W 4257 nt2.27□□□□□ -2.05
SUB2Q07478 YJL022WYJL022W 309 nt2.26□□□□□ -2.05
SUB2Q07478 YOR102WYOR102W 351 nt2.26□□□□□ -2.05
SUB2Q07478 PRP5YBR237W 2550 nt2.24□□□□□ -2.05
SUB2Q07478 COA6YMR244C-A 315 nt2.24□□□□□ -2.05
SUB2Q07478 PEP1YBL017C 4740 nt2.23□□□□□ -2.05
SUB2Q07478 MYO2YOR326W 4725 nt2.23□□□□□ -2.05
SUB2Q07478 ROM2YLR371W 4071 nt2.23□□□□□ -2.05
SUB2Q07478 DNF1YER166W 4716 nt2.22□□□□□ -2.05
SUB2Q07478 CLU1YMR012W 3834 nt2.22□□□□□ -2.05
SUB2Q07478 TOR2YKL203C 7425 nt2.21□□□□□ -2.06
SUB2Q07478 YGL123C-AYGL123C-A 231 nt2.21□□□□□ -2.06
SUB2Q07478 YIL020C-AYIL020C-A 339 nt2.21□□□□□ -2.06
SUB2Q07478 YOR314W-AYOR314W-A 111 nt2.21□□□□□ -2.06
SUB2Q07478 PKH3YDR466W 2697 nt2.21□□□□□ -2.06
SUB2Q07478 EAF1YDR359C 2949 nt2.21□□□□□ -2.06
SUB2Q07478 KAP122YGL016W 3246 nt2.19□□□□□ -2.06
SUB2Q07478 UTP8YGR128C 2142 nt2.19□□□□□ -2.06
SUB2Q07478 YBL053WYBL053W 375 nt2.19□□□□□ -2.06
SUB2Q07478 snR14snR14 160 nt2.19□□□□□ -2.06
SUB2Q07478 snR48snR48 113 nt2.18□□□□□ -2.06
SUB2Q07478 MDS3YGL197W 4464 nt2.17□□□□□ -2.06
SUB2Q07478 COX5BYIL111W 456 nt2.17□□□□□ -2.06
SUB2Q07478 BST1YFL025C 3090 nt2.16□□□□□ -2.06
SUB2Q07478 DGR1YNL130C-A 147 nt2.16□□□□□ -2.06
SUB2Q07478 STO1YMR125W 2586 nt2.15□□□□□ -2.06
SUB2Q07478 SWI4YER111C 3282 nt2.15□□□□□ -2.06
SUB2Q07478 SET3YKR029C 2256 nt2.15□□□□□ -2.06
SUB2Q07478 YLL020CYLL020C 306 nt2.15□□□□□ -2.07
SUB2Q07478 YOR019WYOR019W 2193 nt2.15□□□□□ -2.07
SUB2Q07478 IRC20YLR247C 4671 nt2.14□□□□□ -2.07
SUB2Q07478 NUP145YGL092W 3954 nt2.13□□□□□ -2.07
SUB2Q07478 FKS1YLR342W 5631 nt2.13□□□□□ -2.07
SUB2Q07478 YER053C-AYER053C-A 114 nt2.13□□□□□ -2.07
SUB2Q07478 CMC4YMR194C-B 222 nt2.13□□□□□ -2.07
SUB2Q07478 BFR2YDR299W 1605 nt2.13□□□□□ -2.07
SUB2Q07478 WAR1YML076C 2835 nt2.13□□□□□ -2.07
SUB2Q07478 NOP9YJL010C 2001 nt2.12□□□□□ -2.07
SUB2Q07478 APL3YBL037W 3078 nt2.11□□□□□ -2.07
SUB2Q07478 YML002WYML002W 2214 nt2.09□□□□□ -2.07
SUB2Q07478 NUP192YJL039C 5052 nt2.09□□□□□ -2.07
SUB2Q07478 YLR282CYLR282C 342 nt2.09□□□□□ -2.07
SUB2Q07478 YMR272W-BYMR272W-B 108 nt2.09□□□□□ -2.07
SUB2Q07478 YBR200W-AYBR200W-A 165 nt2.09□□□□□ -2.07
SUB2Q07478 UBP2YOR124C 3819 nt2.08□□□□□ -2.08
SUB2Q07478 snR85snR85 171 nt2.08□□□□□ -2.08
SUB2Q07478 YNL205CYNL205C 423 nt2.08□□□□□ -2.08
SUB2Q07478 YGL182CYGL182C 324 nt2.07□□□□□ -2.08
SUB2Q07478 RPL26BYGR034W 384 nt2.07□□□□□ -2.08
SUB2Q07478 YOR161W-AYOR161W-A 81 nt2.06□□□□□ -2.08
SUB2Q07478 AZF1YOR113W 2745 nt2.06□□□□□ -2.08
SUB2Q07478 MON2YNL297C 4911 nt2.05□□□□□ -2.08
SUB2Q07478 YFR012W-AYFR012W-A 87 nt2.05□□□□□ -2.08
SUB2Q07478 SPP41YDR464W 4308 nt2.05□□□□□ -2.08
SUB2Q07478 CHS6YJL099W 2241 nt2.05□□□□□ -2.08
SUB2Q07478 YOR093CYOR093C 4947 nt2.04□□□□□ -2.08
SUB2Q07478 YHR214C-BYHR214C-B 5382 nt2.04□□□□□ -2.08
SUB2Q07478 NEO1YIL048W 3456 nt2.04□□□□□ -2.08
SUB2Q07478 EST2YLR318W 2655 nt2.03□□□□□ -2.08
SUB2Q07478 SEC3YER008C 4011 nt2.02□□□□□ -2.09
SUB2Q07478 CHS1YNL192W 3396 nt2.01□□□□□ -2.09
SUB2Q07478 tL(UAA)QtL(UAA)Q 85 nt1.99□□□□□ -2.09
SUB2Q07478 CDC31YOR257W 486 nt1.99□□□□□ -2.09
SUB2Q07478 YMR045CYMR045C 5268 nt1.99□□□□□ -2.09
SUB2Q07478 MSN5YDR335W 3675 nt1.99□□□□□ -2.09
SUB2Q07478 YLR041WYLR041W 321 nt1.98□□□□□ -2.09
SUB2Q07478 YBL039C-AYBL039C-A 84 nt1.98□□□□□ -2.09
SUB2Q07478 snR190snR190 190 nt1.98□□□□□ -2.09
SUB2Q07478 DNF3YMR162C 4971 nt1.97□□□□□ -2.09
SUB2Q07478 YCL001W-BYCL001W-B 255 nt1.97□□□□□ -2.09
SUB2Q07478 YLR419WYLR419W 4308 nt1.97□□□□□ -2.09
SUB2Q07478 CFT1YDR301W 4074 nt1.96□□□□□ -2.09
SUB2Q07478 SXM1YDR395W 2835 nt1.96□□□□□ -2.1
SUB2Q07478 RPM2YML091C 3609 nt1.96□□□□□ -2.1
SUB2Q07478 TAH1YCR060W 336 nt1.95□□□□□ -2.1
SUB2Q07478 BPH1YCR032W 6504 nt1.93□□□□□ -2.1
SUB2Q07478 SEC21YNL287W 2808 nt1.93□□□□□ -2.1
SUB2Q07478 NUP157YER105C 4176 nt1.93□□□□□ -2.1
SUB2Q07478 tT(UGU)HtT(UGU)H 72 nt1.93□□□□□ -2.1
SUB2Q07478 FYV10YIL097W 1551 nt1.93□□□□□ -2.1
SUB2Q07478 RTP1YMR185W 2946 nt1.93□□□□□ -2.1
SUB2Q07478 NUP188YML103C 4968 nt1.92□□□□□ -2.1
SUB2Q07478 GEA2YEL022W 4380 nt1.91□□□□□ -2.1
SUB2Q07478 SEC8YPR055W 3198 nt1.91□□□□□ -2.1
SUB2Q07478 YMR247W-AYMR247W-A 144 nt1.91□□□□□ -2.1
SUB2Q07478 YLR232WYLR232W 348 nt1.9□□□□□ -2.11
SUB2Q07478 YCR095W-AYCR095W-A 159 nt1.89□□□□□ -2.11
SUB2Q07478 BRR2YER172C 6492 nt1.89□□□□□ -2.11
SUB2Q07478 STB6YKL072W 2301 nt1.88□□□□□ -2.11
SUB2Q07478 YOR329W-AYOR329W-A 210 nt1.88□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 45.4 ms