Protein–RNA interactions for Protein: P48240

MTR3, Exosome complex component MTR3, yeastyeast

Predicted RBP Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MTR3P48240 RAD50YNL250W 3939 nt1.78□□□□□ -2.12
MTR3P48240 CTF4YPR135W 2784 nt1.77□□□□□ -2.13
MTR3P48240 UFD2YDL190C 2886 nt1.77□□□□□ -2.13
MTR3P48240 LHS1YKL073W 2646 nt1.77□□□□□ -2.13
MTR3P48240 YIL020C-AYIL020C-A 339 nt1.75□□□□□ -2.13
MTR3P48240 YAL067W-AYAL067W-A 228 nt1.75□□□□□ -2.13
MTR3P48240 YMR272W-BYMR272W-B 108 nt1.75□□□□□ -2.13
MTR3P48240 MEC1YBR136W 7107 nt1.74□□□□□ -2.13
MTR3P48240 KIP1YBL063W 3336 nt1.74□□□□□ -2.13
MTR3P48240 YCR038W-AYCR038W-A 126 nt1.74□□□□□ -2.13
MTR3P48240 YMR045CYMR045C 5268 nt1.74□□□□□ -2.13
MTR3P48240 MMS4YBR098W 2076 nt1.73□□□□□ -2.13
MTR3P48240 SLX4YLR135W 2247 nt1.73□□□□□ -2.13
MTR3P48240 YIL002W-AYIL002W-A 210 nt1.73□□□□□ -2.13
MTR3P48240 YJL022WYJL022W 309 nt1.73□□□□□ -2.13
MTR3P48240 YLR422WYLR422W 5799 nt1.73□□□□□ -2.13
MTR3P48240 PEP1YBL017C 4740 nt1.73□□□□□ -2.13
MTR3P48240 DNF3YMR162C 4971 nt1.72□□□□□ -2.13
MTR3P48240 IRC20YLR247C 4671 nt1.72□□□□□ -2.13
MTR3P48240 TMA7YLR262C-A 195 nt1.72□□□□□ -2.13
MTR3P48240 KAP122YGL016W 3246 nt1.72□□□□□ -2.13
MTR3P48240 YOR093CYOR093C 4947 nt1.72□□□□□ -2.13
MTR3P48240 SAC3YDR159W 3906 nt1.72□□□□□ -2.13
MTR3P48240 YNL211CYNL211C 261 nt1.71□□□□□ -2.14
MTR3P48240 snR14snR14 160 nt1.71□□□□□ -2.14
MTR3P48240 YAR009CYAR009C 3591 nt1.7□□□□□ -2.14
MTR3P48240 SMC4YLR086W 4257 nt1.69□□□□□ -2.14
MTR3P48240 MON2YNL297C 4911 nt1.69□□□□□ -2.14
MTR3P48240 COA6YMR244C-A 315 nt1.69□□□□□ -2.14
MTR3P48240 YOR102WYOR102W 351 nt1.68□□□□□ -2.14
MTR3P48240 snR48snR48 113 nt1.68□□□□□ -2.14
MTR3P48240 CFT1YDR301W 4074 nt1.68□□□□□ -2.14
MTR3P48240 IRA1YBR140C 9279 nt1.68□□□□□ -2.14
MTR3P48240 TRM732YMR259C 4263 nt1.67□□□□□ -2.14
MTR3P48240 YHL015W-AYHL015W-A 84 nt1.67□□□□□ -2.14
MTR3P48240 YLL054CYLL054C 2532 nt1.66□□□□□ -2.14
MTR3P48240 BPH1YCR032W 6504 nt1.65□□□□□ -2.14
MTR3P48240 YNL205CYNL205C 423 nt1.65□□□□□ -2.15
MTR3P48240 RSM22YKL155C 1887 nt1.65□□□□□ -2.15
MTR3P48240 snR85snR85 171 nt1.64□□□□□ -2.15
MTR3P48240 YER053C-AYER053C-A 114 nt1.64□□□□□ -2.15
MTR3P48240 YFR012W-AYFR012W-A 87 nt1.64□□□□□ -2.15
MTR3P48240 YGL123C-AYGL123C-A 231 nt1.64□□□□□ -2.15
MTR3P48240 PRP5YBR237W 2550 nt1.64□□□□□ -2.15
MTR3P48240 SET3YKR029C 2256 nt1.63□□□□□ -2.15
MTR3P48240 PKH3YDR466W 2697 nt1.63□□□□□ -2.15
MTR3P48240 YOR314W-AYOR314W-A 111 nt1.63□□□□□ -2.15
MTR3P48240 CDC31YOR257W 486 nt1.61□□□□□ -2.15
MTR3P48240 BFR2YDR299W 1605 nt1.61□□□□□ -2.15
MTR3P48240 SWI4YER111C 3282 nt1.6□□□□□ -2.15
MTR3P48240 COX5BYIL111W 456 nt1.6□□□□□ -2.15
MTR3P48240 EAF1YDR359C 2949 nt1.6□□□□□ -2.15
MTR3P48240 STO1YMR125W 2586 nt1.6□□□□□ -2.15
MTR3P48240 tL(UAA)QtL(UAA)Q 85 nt1.59□□□□□ -2.15
MTR3P48240 YKL100W-AYKL100W-A 90 nt1.59□□□□□ -2.15
MTR3P48240 YOR161W-AYOR161W-A 81 nt1.59□□□□□ -2.15
MTR3P48240 APL3YBL037W 3078 nt1.59□□□□□ -2.16
MTR3P48240 CMC4YMR194C-B 222 nt1.58□□□□□ -2.16
MTR3P48240 YOR019WYOR019W 2193 nt1.58□□□□□ -2.16
MTR3P48240 NOP9YJL010C 2001 nt1.57□□□□□ -2.16
MTR3P48240 YGL182CYGL182C 324 nt1.57□□□□□ -2.16
MTR3P48240 YLL020CYLL020C 306 nt1.57□□□□□ -2.16
MTR3P48240 SEC3YER008C 4011 nt1.57□□□□□ -2.16
MTR3P48240 BST1YFL025C 3090 nt1.56□□□□□ -2.16
MTR3P48240 YLR282CYLR282C 342 nt1.56□□□□□ -2.16
MTR3P48240 CDC25YLR310C 4770 nt1.56□□□□□ -2.16
MTR3P48240 REV3YPL167C 4515 nt1.55□□□□□ -2.16
MTR3P48240 ASE1YOR058C 2658 nt1.55□□□□□ -2.16
MTR3P48240 VPS15YBR097W 4365 nt1.54□□□□□ -2.16
MTR3P48240 YLR041WYLR041W 321 nt1.54□□□□□ -2.16
MTR3P48240 YCL001W-BYCL001W-B 255 nt1.54□□□□□ -2.16
MTR3P48240 PMD1YER132C 5262 nt1.54□□□□□ -2.16
MTR3P48240 ROM2YLR371W 4071 nt1.54□□□□□ -2.16
MTR3P48240 STB6YKL072W 2301 nt1.54□□□□□ -2.16
MTR3P48240 WAR1YML076C 2835 nt1.53□□□□□ -2.16
MTR3P48240 YBL039C-AYBL039C-A 84 nt1.53□□□□□ -2.16
MTR3P48240 UTP8YGR128C 2142 nt1.52□□□□□ -2.17
MTR3P48240 NUP145YGL092W 3954 nt1.52□□□□□ -2.17
MTR3P48240 SMC1YFL008W 3678 nt1.52□□□□□ -2.17
MTR3P48240 YML002WYML002W 2214 nt1.51□□□□□ -2.17
MTR3P48240 CCH1YGR217W 6120 nt1.51□□□□□ -2.17
MTR3P48240 CHS6YJL099W 2241 nt1.51□□□□□ -2.17
MTR3P48240 NUP188YML103C 4968 nt1.51□□□□□ -2.17
MTR3P48240 EST2YLR318W 2655 nt1.5□□□□□ -2.17
MTR3P48240 FIG2YCR089W 4830 nt1.5□□□□□ -2.17
MTR3P48240 CAT8YMR280C 4302 nt1.49□□□□□ -2.17
MTR3P48240 CDC39YCR093W 6327 nt1.49□□□□□ -2.17
MTR3P48240 NUP157YER105C 4176 nt1.49□□□□□ -2.17
MTR3P48240 YBR200W-AYBR200W-A 165 nt1.49□□□□□ -2.17
MTR3P48240 CLU1YMR012W 3834 nt1.49□□□□□ -2.17
MTR3P48240 CHS1YNL192W 3396 nt1.48□□□□□ -2.17
MTR3P48240 RPL26BYGR034W 384 nt1.48□□□□□ -2.17
MTR3P48240 snR190snR190 190 nt1.47□□□□□ -2.17
MTR3P48240 AZF1YOR113W 2745 nt1.47□□□□□ -2.17
MTR3P48240 MSN5YDR335W 3675 nt1.46□□□□□ -2.18
MTR3P48240 tT(UGU)HtT(UGU)H 72 nt1.46□□□□□ -2.18
MTR3P48240 YMR247W-AYMR247W-A 144 nt1.46□□□□□ -2.18
MTR3P48240 BRR2YER172C 6492 nt1.46□□□□□ -2.18
MTR3P48240 NUP192YJL039C 5052 nt1.45□□□□□ -2.18
MTR3P48240 KAP120YPL125W 3099 nt1.45□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 48.1 ms