Protein–RNA interactions for Protein: P47976

CTH1, mRNA decay factor CTH1, yeastyeast

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTH1P47976 KOG1YHR186C 4674 nt2.34□□□□□ -2.03
CTH1P47976 TRA1YHR099W 11235 nt2.34□□□□□ -2.03
CTH1P47976 tM(CAU)Q2tM(CAU)Q2 78 nt2.34□□□□□ -2.03
CTH1P47976 BRR2YER172C 6492 nt2.34□□□□□ -2.04
CTH1P47976 BRE1YDL074C 2103 nt2.33□□□□□ -2.04
CTH1P47976 VPS8YAL002W 3825 nt2.33□□□□□ -2.04
CTH1P47976 AMS1YGL156W 3252 nt2.33□□□□□ -2.04
CTH1P47976 YDR521WYDR521W 336 nt2.33□□□□□ -2.04
CTH1P47976 YBL039C-AYBL039C-A 84 nt2.33□□□□□ -2.04
CTH1P47976 YBR072C-AYBR072C-A 162 nt2.33□□□□□ -2.04
CTH1P47976 CDC60YPL160W 3273 nt2.33□□□□□ -2.04
CTH1P47976 APL2YKL135C 2181 nt2.33□□□□□ -2.04
CTH1P47976 MSH5YDL154W 2706 nt2.33□□□□□ -2.04
CTH1P47976 SEC31YDL195W 3822 nt2.32□□□□□ -2.04
CTH1P47976 YLR035C-AYLR035C-A 3468 nt2.32□□□□□ -2.04
CTH1P47976 YMR272W-BYMR272W-B 108 nt2.32□□□□□ -2.04
CTH1P47976 ENV11YGR071C 2583 nt2.32□□□□□ -2.04
CTH1P47976 TRS130YMR218C 3309 nt2.31□□□□□ -2.04
CTH1P47976 TOF1YNL273W 3717 nt2.3□□□□□ -2.04
CTH1P47976 SEC16YPL085W 6588 nt2.3□□□□□ -2.04
CTH1P47976 ISW1YBR245C 3390 nt2.29□□□□□ -2.04
CTH1P47976 YBL100W-CYBL100W-C 120 nt2.29□□□□□ -2.04
CTH1P47976 YGR109W-BYGR109W-B 4644 nt2.29□□□□□ -2.04
CTH1P47976 PKH2YOL100W 3246 nt2.28□□□□□ -2.04
CTH1P47976 YBL071C-BYBL071C-B 99 nt2.28□□□□□ -2.04
CTH1P47976 snR53snR53 91 nt2.28□□□□□ -2.04
CTH1P47976 YJR039WYJR039W 3366 nt2.28□□□□□ -2.04
CTH1P47976 MET18YIL128W 3099 nt2.28□□□□□ -2.05
CTH1P47976 BFR2YDR299W 1605 nt2.28□□□□□ -2.05
CTH1P47976 GEA1YJR031C 4227 nt2.28□□□□□ -2.05
CTH1P47976 MAK10YEL053C 2202 nt2.27□□□□□ -2.05
CTH1P47976 CSF1YLR087C 8877 nt2.26□□□□□ -2.05
CTH1P47976 TAH1YCR060W 336 nt2.26□□□□□ -2.05
CTH1P47976 YGL123C-AYGL123C-A 231 nt2.25□□□□□ -2.05
CTH1P47976 MLH3YPL164C 2148 nt2.25□□□□□ -2.05
CTH1P47976 BIR1YJR089W 2865 nt2.25□□□□□ -2.05
CTH1P47976 YJL127W-AYJL127W-A 117 nt2.24□□□□□ -2.05
CTH1P47976 RPL37BYDR500C 267 nt2.23□□□□□ -2.05
CTH1P47976 COX5BYIL111W 456 nt2.22□□□□□ -2.05
CTH1P47976 RPS29AYLR388W 171 nt2.22□□□□□ -2.05
CTH1P47976 NEO1YIL048W 3456 nt2.22□□□□□ -2.05
CTH1P47976 KAP120YPL125W 3099 nt2.22□□□□□ -2.05
CTH1P47976 COG4YPR105C 2586 nt2.22□□□□□ -2.05
CTH1P47976 IRA2YOL081W 9240 nt2.21□□□□□ -2.06
CTH1P47976 YGR240C-AYGR240C-A 201 nt2.21□□□□□ -2.06
CTH1P47976 YKL100W-AYKL100W-A 90 nt2.2□□□□□ -2.06
CTH1P47976 SEC1YDR164C 2175 nt2.2□□□□□ -2.06
CTH1P47976 IST2YBR086C 2841 nt2.2□□□□□ -2.06
CTH1P47976 BUD2YKL092C 3315 nt2.19□□□□□ -2.06
CTH1P47976 COA6YMR244C-A 315 nt2.19□□□□□ -2.06
CTH1P47976 BNI1YNL271C 5862 nt2.19□□□□□ -2.06
CTH1P47976 COG6YNL041C 2520 nt2.19□□□□□ -2.06
CTH1P47976 YDL206WYDL206W 2289 nt2.19□□□□□ -2.06
CTH1P47976 MDS3YGL197W 4464 nt2.19□□□□□ -2.06
CTH1P47976 TOP2YNL088W 4287 nt2.18□□□□□ -2.06
CTH1P47976 YDR210WYDR210W 228 nt2.18□□□□□ -2.06
CTH1P47976 YMR175W-AYMR175W-A 195 nt2.18□□□□□ -2.06
CTH1P47976 YOL164W-AYOL164W-A 183 nt2.18□□□□□ -2.06
CTH1P47976 YOR161W-AYOR161W-A 81 nt2.18□□□□□ -2.06
CTH1P47976 UFD2YDL190C 2886 nt2.18□□□□□ -2.06
CTH1P47976 SLI15YBR156C 2097 nt2.18□□□□□ -2.06
CTH1P47976 HSL1YKL101W 4557 nt2.16□□□□□ -2.06
CTH1P47976 FRK1YPL141C 2598 nt2.16□□□□□ -2.06
CTH1P47976 snR50snR50 90 nt2.15□□□□□ -2.07
CTH1P47976 PKH3YDR466W 2697 nt2.15□□□□□ -2.07
CTH1P47976 CFT1YDR301W 4074 nt2.15□□□□□ -2.07
CTH1P47976 FYV10YIL097W 1551 nt2.15□□□□□ -2.07
CTH1P47976 TDA9YML081W 3756 nt2.14□□□□□ -2.07
CTH1P47976 EAF1YDR359C 2949 nt2.14□□□□□ -2.07
CTH1P47976 YHR180W-AYHR180W-A 183 nt2.14□□□□□ -2.07
CTH1P47976 ADR1YDR216W 3972 nt2.13□□□□□ -2.07
CTH1P47976 snR64snR64 101 nt2.13□□□□□ -2.07
CTH1P47976 RPS26AYGL189C 360 nt2.13□□□□□ -2.07
CTH1P47976 YLR232WYLR232W 348 nt2.13□□□□□ -2.07
CTH1P47976 AGC1YPR021C 2709 nt2.13□□□□□ -2.07
CTH1P47976 RSM22YKL155C 1887 nt2.13□□□□□ -2.07
CTH1P47976 FKS1YLR342W 5631 nt2.13□□□□□ -2.07
CTH1P47976 TOR2YKL203C 7425 nt2.12□□□□□ -2.07
CTH1P47976 YOR343W-BYOR343W-B 5313 nt2.12□□□□□ -2.07
CTH1P47976 YBR196C-AYBR196C-A 150 nt2.12□□□□□ -2.07
CTH1P47976 snR47snR47 99 nt2.12□□□□□ -2.07
CTH1P47976 TBS1YBR150C 3285 nt2.12□□□□□ -2.07
CTH1P47976 NUP157YER105C 4176 nt2.11□□□□□ -2.07
CTH1P47976 YGR146C-AYGR146C-A 162 nt2.1□□□□□ -2.07
CTH1P47976 GLG1YKR058W 1851 nt2.09□□□□□ -2.08
CTH1P47976 SEC21YNL287W 2808 nt2.09□□□□□ -2.08
CTH1P47976 UBR1YGR184C 5853 nt2.08□□□□□ -2.08
CTH1P47976 YBR109W-AYBR109W-A 225 nt2.08□□□□□ -2.08
CTH1P47976 CHC1YGL206C 4962 nt2.08□□□□□ -2.08
CTH1P47976 CAT8YMR280C 4302 nt2.08□□□□□ -2.08
CTH1P47976 TRL1YJL087C 2484 nt2.08□□□□□ -2.08
CTH1P47976 YML002WYML002W 2214 nt2.07□□□□□ -2.08
CTH1P47976 CTR9YOL145C 3234 nt2.07□□□□□ -2.08
CTH1P47976 CHS1YNL192W 3396 nt2.07□□□□□ -2.08
CTH1P47976 IRE1YHR079C 3348 nt2.06□□□□□ -2.08
CTH1P47976 PMD1YER132C 5262 nt2.06□□□□□ -2.08
CTH1P47976 MSH3YCR092C 3057 nt2.06□□□□□ -2.08
CTH1P47976 YGR130CYGR130C 2451 nt2.06□□□□□ -2.08
CTH1P47976 YER078W-AYER078W-A 165 nt2.06□□□□□ -2.08
CTH1P47976 SYH1YPL105C 2550 nt2.05□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 34.1 ms