Protein–RNA interactions for Protein: P47061

VPS53, Vacuolar protein sorting-associated protein 53, yeastyeast

Predictions only

Length 822 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS53P47061 YBR099CYBR099C 384 nt2.15□□□□□ -2.07
VPS53P47061 PRP5YBR237W 2550 nt2.15□□□□□ -2.07
VPS53P47061 APL1YJR005W 2103 nt2.14□□□□□ -2.07
VPS53P47061 NEO1YIL048W 3456 nt2.14□□□□□ -2.07
VPS53P47061 YLL054CYLL054C 2532 nt2.14□□□□□ -2.07
VPS53P47061 FRK1YPL141C 2598 nt2.13□□□□□ -2.07
VPS53P47061 YOR019WYOR019W 2193 nt2.13□□□□□ -2.07
VPS53P47061 YCR095W-AYCR095W-A 159 nt2.13□□□□□ -2.07
VPS53P47061 YMR045CYMR045C 5268 nt2.12□□□□□ -2.07
VPS53P47061 PDR8YLR266C 2106 nt2.12□□□□□ -2.07
VPS53P47061 ADR1YDR216W 3972 nt2.12□□□□□ -2.07
VPS53P47061 SPO24YPR036W-A 204 nt2.11□□□□□ -2.07
VPS53P47061 HER1YOR227W 3741 nt2.11□□□□□ -2.07
VPS53P47061 TDA9YML081W 3756 nt2.11□□□□□ -2.07
VPS53P47061 SFB2YNL049C 2631 nt2.1□□□□□ -2.07
VPS53P47061 YDL206WYDL206W 2289 nt2.1□□□□□ -2.07
VPS53P47061 DNF3YMR162C 4971 nt2.1□□□□□ -2.07
VPS53P47061 OST4YDL232W 111 nt2.1□□□□□ -2.07
VPS53P47061 YHR217CYHR217C 462 nt2.1□□□□□ -2.07
VPS53P47061 YNL211CYNL211C 261 nt2.1□□□□□ -2.07
VPS53P47061 CMC4YMR194C-B 222 nt2.09□□□□□ -2.07
VPS53P47061 MYO4YAL029C 4416 nt2.09□□□□□ -2.08
VPS53P47061 LHS1YKL073W 2646 nt2.08□□□□□ -2.08
VPS53P47061 UBR2YLR024C 5619 nt2.08□□□□□ -2.08
VPS53P47061 YAL067W-AYAL067W-A 228 nt2.08□□□□□ -2.08
VPS53P47061 SEY1YOR165W 2331 nt2.08□□□□□ -2.08
VPS53P47061 POL5YEL055C 3069 nt2.07□□□□□ -2.08
VPS53P47061 PEP1YBL017C 4740 nt2.07□□□□□ -2.08
VPS53P47061 NUT1YGL151W 3399 nt2.06□□□□□ -2.08
VPS53P47061 YGL182CYGL182C 324 nt2.06□□□□□ -2.08
VPS53P47061 CHS6YJL099W 2241 nt2.06□□□□□ -2.08
VPS53P47061 MSH6YDR097C 3729 nt2.06□□□□□ -2.08
VPS53P47061 NUP192YJL039C 5052 nt2.06□□□□□ -2.08
VPS53P47061 UTP21YLR409C 2820 nt2.05□□□□□ -2.08
VPS53P47061 UFD2YDL190C 2886 nt2.05□□□□□ -2.08
VPS53P47061 SEC63YOR254C 1992 nt2.05□□□□□ -2.08
VPS53P47061 MGA2YIR033W 3342 nt2.05□□□□□ -2.08
VPS53P47061 YMR272W-BYMR272W-B 108 nt2.05□□□□□ -2.08
VPS53P47061 MYO2YOR326W 4725 nt2.05□□□□□ -2.08
VPS53P47061 STB6YKL072W 2301 nt2.03□□□□□ -2.08
VPS53P47061 TRM3YDL112W 4311 nt2.03□□□□□ -2.08
VPS53P47061 FIG2YCR089W 4830 nt2.03□□□□□ -2.08
VPS53P47061 snR61snR61 90 nt2.03□□□□□ -2.08
VPS53P47061 YLR282CYLR282C 342 nt2.03□□□□□ -2.08
VPS53P47061 GCN2YDR283C 4980 nt2.02□□□□□ -2.09
VPS53P47061 YGL123C-AYGL123C-A 231 nt2.02□□□□□ -2.09
VPS53P47061 NUP157YER105C 4176 nt2.02□□□□□ -2.09
VPS53P47061 COA6YMR244C-A 315 nt2.01□□□□□ -2.09
VPS53P47061 YLR422WYLR422W 5799 nt2.01□□□□□ -2.09
VPS53P47061 BFR2YDR299W 1605 nt2.01□□□□□ -2.09
VPS53P47061 IRC20YLR247C 4671 nt2.01□□□□□ -2.09
VPS53P47061 RAD50YNL250W 3939 nt2□□□□□ -2.09
VPS53P47061 SOM1YEL059C-A 225 nt2□□□□□ -2.09
VPS53P47061 TMA7YLR262C-A 195 nt2□□□□□ -2.09
VPS53P47061 YOR161W-AYOR161W-A 81 nt2□□□□□ -2.09
VPS53P47061 ALY2YJL084C 3141 nt2□□□□□ -2.09
VPS53P47061 SAC3YDR159W 3906 nt1.99□□□□□ -2.09
VPS53P47061 YJR039WYJR039W 3366 nt1.99□□□□□ -2.09
VPS53P47061 YBL039C-AYBL039C-A 84 nt1.99□□□□□ -2.09
VPS53P47061 YDL247W-AYDL247W-A 75 nt1.98□□□□□ -2.09
VPS53P47061 EMC5YIL027C 426 nt1.98□□□□□ -2.09
VPS53P47061 YLL020CYLL020C 306 nt1.98□□□□□ -2.09
VPS53P47061 YNL067W-BYNL067W-B 141 nt1.98□□□□□ -2.09
VPS53P47061 PMD1YER132C 5262 nt1.98□□□□□ -2.09
VPS53P47061 EAF1YDR359C 2949 nt1.98□□□□□ -2.09
VPS53P47061 UTP8YGR128C 2142 nt1.97□□□□□ -2.09
VPS53P47061 PAN2YGL094C 3348 nt1.96□□□□□ -2.1
VPS53P47061 snR14snR14 160 nt1.96□□□□□ -2.1
VPS53P47061 TBS1YBR150C 3285 nt1.96□□□□□ -2.1
VPS53P47061 RSM22YKL155C 1887 nt1.95□□□□□ -2.1
VPS53P47061 SBH1YER087C-B 249 nt1.94□□□□□ -2.1
VPS53P47061 QCR9YGR183C 201 nt1.94□□□□□ -2.1
VPS53P47061 snR39BsnR39B 96 nt1.94□□□□□ -2.1
VPS53P47061 YAR009CYAR009C 3591 nt1.94□□□□□ -2.1
VPS53P47061 MMS4YBR098W 2076 nt1.94□□□□□ -2.1
VPS53P47061 RTP1YMR185W 2946 nt1.94□□□□□ -2.1
VPS53P47061 SLX4YLR135W 2247 nt1.93□□□□□ -2.1
VPS53P47061 COX5BYIL111W 456 nt1.93□□□□□ -2.1
VPS53P47061 SMC4YLR086W 4257 nt1.92□□□□□ -2.1
VPS53P47061 YHR131W-AYHR131W-A 246 nt1.92□□□□□ -2.1
VPS53P47061 TAH1YCR060W 336 nt1.91□□□□□ -2.1
VPS53P47061 YKL100W-AYKL100W-A 90 nt1.91□□□□□ -2.1
VPS53P47061 MON2YNL297C 4911 nt1.91□□□□□ -2.1
VPS53P47061 KCS1YDR017C 3153 nt1.9□□□□□ -2.11
VPS53P47061 STF2YGR008C 255 nt1.89□□□□□ -2.11
VPS53P47061 SKI3YPR189W 4299 nt1.88□□□□□ -2.11
VPS53P47061 CFT1YDR301W 4074 nt1.88□□□□□ -2.11
VPS53P47061 YGL041C-BYGL041C-B 183 nt1.88□□□□□ -2.11
VPS53P47061 CHS1YNL192W 3396 nt1.87□□□□□ -2.11
VPS53P47061 KAP122YGL016W 3246 nt1.86□□□□□ -2.11
VPS53P47061 PKH3YDR466W 2697 nt1.86□□□□□ -2.11
VPS53P47061 RCO1YMR075W 2055 nt1.86□□□□□ -2.11
VPS53P47061 YML002WYML002W 2214 nt1.85□□□□□ -2.11
VPS53P47061 tT(UGU)HtT(UGU)H 72 nt1.84□□□□□ -2.11
VPS53P47061 SMC1YFL008W 3678 nt1.84□□□□□ -2.12
VPS53P47061 YLR041WYLR041W 321 nt1.83□□□□□ -2.12
VPS53P47061 NOP9YJL010C 2001 nt1.82□□□□□ -2.12
VPS53P47061 COG6YNL041C 2520 nt1.82□□□□□ -2.12
VPS53P47061 BRR2YER172C 6492 nt1.82□□□□□ -2.12
VPS53P47061 STO1YMR125W 2586 nt1.82□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 82.7 ms