Protein–RNA interactions for Protein: P43321

SMD3, Small nuclear ribonucleoprotein Sm D3, yeastyeast

Known RBP Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD3P43321 YMR321CYMR321C 318 nt0.39□□□□□ -2.35
SMD3P43321 YCR018C-AYCR018C-A 255 nt0.38□□□□□ -2.35
SMD3P43321 YDR048CYDR048C 315 nt0.38□□□□□ -2.35
SMD3P43321 YJL127W-AYJL127W-A 117 nt0.38□□□□□ -2.35
SMD3P43321 YPL225WYPL225W 441 nt0.38□□□□□ -2.35
SMD3P43321 SEC8YPR055W 3198 nt0.37□□□□□ -2.35
SMD3P43321 PET111YMR257C 2403 nt0.37□□□□□ -2.35
SMD3P43321 YDR157WYDR157W 402 nt0.37□□□□□ -2.35
SMD3P43321 YFR012W-AYFR012W-A 87 nt0.37□□□□□ -2.35
SMD3P43321 VAR1Q0140 1197 nt0.36□□□□□ -2.35
SMD3P43321 YGR035CYGR035C 351 nt0.36□□□□□ -2.35
SMD3P43321 YHL046W-AYHL046W-A 327 nt0.35□□□□□ -2.35
SMD3P43321 TAR1YLR154W-C 375 nt0.35□□□□□ -2.35
SMD3P43321 CSE2YNR010W 450 nt0.35□□□□□ -2.35
SMD3P43321 YDL073WYDL073W 2955 nt0.34□□□□□ -2.35
SMD3P43321 SSS1YDR086C 243 nt0.34□□□□□ -2.36
SMD3P43321 FYV10YIL097W 1551 nt0.34□□□□□ -2.36
SMD3P43321 YJL120WYJL120W 324 nt0.34□□□□□ -2.36
SMD3P43321 LTE1YAL024C 4308 nt0.33□□□□□ -2.36
SMD3P43321 YLR399W-AYLR399W-A 105 nt0.33□□□□□ -2.36
SMD3P43321 snR190snR190 190 nt0.33□□□□□ -2.36
SMD3P43321 YPR160W-AYPR160W-A 81 nt0.33□□□□□ -2.36
SMD3P43321 SBH1YER087C-B 249 nt0.32□□□□□ -2.36
SMD3P43321 YMR307C-AYMR307C-A 195 nt0.32□□□□□ -2.36
SMD3P43321 VIK1YPL253C 1944 nt0.31□□□□□ -2.36
SMD3P43321 RPS27BYHR021C 249 nt0.3□□□□□ -2.36
SMD3P43321 PRP5YBR237W 2550 nt0.3□□□□□ -2.36
SMD3P43321 YOR192C-BYOR192C-B 5313 nt0.3□□□□□ -2.36
SMD3P43321 PRP42YDR235W 1635 nt0.29□□□□□ -2.36
SMD3P43321 PAU12YGR294W 363 nt0.29□□□□□ -2.36
SMD3P43321 MLP1YKR095W 5628 nt0.28□□□□□ -2.36
SMD3P43321 YKL136WYKL136W 399 nt0.28□□□□□ -2.36
SMD3P43321 YAL067W-AYAL067W-A 228 nt0.28□□□□□ -2.36
SMD3P43321 YMR160WYMR160W 2451 nt0.27□□□□□ -2.37
SMD3P43321 COG8YML071C 1824 nt0.27□□□□□ -2.37
SMD3P43321 YDL185C-AYDL185C-A 228 nt0.27□□□□□ -2.37
SMD3P43321 OST4YDL232W 111 nt0.27□□□□□ -2.37
SMD3P43321 YDR354C-AYDR354C-A 144 nt0.27□□□□□ -2.37
SMD3P43321 YIL115W-AYIL115W-A 372 nt0.27□□□□□ -2.37
SMD3P43321 YPR016W-AYPR016W-A 261 nt0.27□□□□□ -2.37
SMD3P43321 YPR170W-AYPR170W-A 186 nt0.27□□□□□ -2.37
SMD3P43321 YSP1YHR155W 3687 nt0.26□□□□□ -2.37
SMD3P43321 ASE1YOR058C 2658 nt0.26□□□□□ -2.37
SMD3P43321 snR60snR60 104 nt0.26□□□□□ -2.37
SMD3P43321 BEM3YPL115C 3387 nt0.23□□□□□ -2.37
SMD3P43321 BIR1YJR089W 2865 nt0.23□□□□□ -2.37
SMD3P43321 INA22YIR024C 651 nt0.23□□□□□ -2.37
SMD3P43321 YLR282CYLR282C 342 nt0.23□□□□□ -2.37
SMD3P43321 YPL038W-AYPL038W-A 192 nt0.23□□□□□ -2.37
SMD3P43321 COY1YKL179C 2040 nt0.23□□□□□ -2.37
SMD3P43321 NNF2YGR089W 2811 nt0.22□□□□□ -2.37
SMD3P43321 tN(GUU)QtN(GUU)Q 71 nt0.22□□□□□ -2.37
SMD3P43321 YOR029WYOR029W 336 nt0.22□□□□□ -2.37
SMD3P43321 YIL032CYIL032C 357 nt0.21□□□□□ -2.38
SMD3P43321 YPR092WYPR092W 306 nt0.21□□□□□ -2.38
SMD3P43321 FMP27YLR454W 7887 nt0.19□□□□□ -2.38
SMD3P43321 ULP2YIL031W 3105 nt0.19□□□□□ -2.38
SMD3P43321 YGL149WYGL149W 306 nt0.19□□□□□ -2.38
SMD3P43321 BLI1YKL061W 342 nt0.19□□□□□ -2.38
SMD3P43321 YKL100W-AYKL100W-A 90 nt0.19□□□□□ -2.38
SMD3P43321 YOR345CYOR345C 351 nt0.19□□□□□ -2.38
SMD3P43321 HAL9YOL089C 3093 nt0.18□□□□□ -2.38
SMD3P43321 YDR371C-AYDR371C-A 105 nt0.18□□□□□ -2.38
SMD3P43321 YEL020C-BYEL020C-B 198 nt0.18□□□□□ -2.38
SMD3P43321 YGL123C-AYGL123C-A 231 nt0.18□□□□□ -2.38
SMD3P43321 YAF9YNL107W 681 nt0.18□□□□□ -2.38
SMD3P43321 YPR197CYPR197C 564 nt0.18□□□□□ -2.38
SMD3P43321 UTP20YBL004W 7482 nt0.17□□□□□ -2.38
SMD3P43321 ULI1YFR026C 510 nt0.17□□□□□ -2.38
SMD3P43321 YJL026C-AYJL026C-A 222 nt0.17□□□□□ -2.38
SMD3P43321 YJL197C-AYJL197C-A 282 nt0.17□□□□□ -2.38
SMD3P43321 snR36snR36 182 nt0.17□□□□□ -2.38
SMD3P43321 RPS26AYGL189C 360 nt0.16□□□□□ -2.38
SMD3P43321 YOR072W-BYOR072W-B 162 nt0.16□□□□□ -2.38
SMD3P43321 YOR161W-AYOR161W-A 81 nt0.16□□□□□ -2.38
SMD3P43321 YNL054W-BYNL054W-B 5250 nt0.15□□□□□ -2.39
SMD3P43321 HTL1YCR020W-B 237 nt0.15□□□□□ -2.39
SMD3P43321 YDR102CYDR102C 333 nt0.15□□□□□ -2.39
SMD3P43321 YFL019CYFL019C 354 nt0.15□□□□□ -2.39
SMD3P43321 YLL006W-AYLL006W-A 177 nt0.15□□□□□ -2.39
SMD3P43321 YLL019W-AYLL019W-A 93 nt0.15□□□□□ -2.39
SMD3P43321 ABF2YMR072W 552 nt0.15□□□□□ -2.39
SMD3P43321 YNL028WYNL028W 318 nt0.15□□□□□ -2.39
SMD3P43321 ORC3YLL004W 1851 nt0.15□□□□□ -2.39
SMD3P43321 YCR022CYCR022C 345 nt0.13□□□□□ -2.39
SMD3P43321 YDR118W-AYDR118W-A 117 nt0.13□□□□□ -2.39
SMD3P43321 YHR131W-AYHR131W-A 246 nt0.13□□□□□ -2.39
SMD3P43321 YMR193C-AYMR193C-A 387 nt0.13□□□□□ -2.39
SMD3P43321 YOL013W-AYOL013W-A 192 nt0.13□□□□□ -2.39
SMD3P43321 YOR186C-AYOR186C-A 210 nt0.13□□□□□ -2.39
SMD3P43321 TRS65YGR166W 1683 nt0.12□□□□□ -2.39
SMD3P43321 YDR366CYDR366C 399 nt0.12□□□□□ -2.39
SMD3P43321 YNL146WYNL146W 303 nt0.12□□□□□ -2.39
SMD3P43321 YPR012WYPR012W 255 nt0.12□□□□□ -2.39
SMD3P43321 YFL063WYFL063W 456 nt0.11□□□□□ -2.39
SMD3P43321 COX12YLR038C 252 nt0.1□□□□□ -2.39
SMD3P43321 NIP1YMR309C 2439 nt0.1□□□□□ -2.39
SMD3P43321 SNU13YEL026W 381 nt0.09□□□□□ -2.4
SMD3P43321 YDR183C-AYDR183C-A 258 nt0.08□□□□□ -2.4
SMD3P43321 UTP8YGR128C 2142 nt0.07□□□□□ -2.4
Retrieved 100 of 7,029 protein–RNA pairs in 28.2 ms