Protein–RNA interactions for Protein: P42843

SKP2, F-box protein SKP2, yeastyeast

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SKP2P42843 SXM1YDR395W 2835 nt1.64□□□□□ -2.15
SKP2P42843 YDR521WYDR521W 336 nt1.64□□□□□ -2.15
SKP2P42843 YOR381W-AYOR381W-A 168 nt1.64□□□□□ -2.15
SKP2P42843 UFD2YDL190C 2886 nt1.63□□□□□ -2.15
SKP2P42843 RPS25BYLR333C 327 nt1.63□□□□□ -2.15
SKP2P42843 MCM10YIL150C 1716 nt1.63□□□□□ -2.15
SKP2P42843 SLI15YBR156C 2097 nt1.62□□□□□ -2.15
SKP2P42843 MEC1YBR136W 7107 nt1.62□□□□□ -2.15
SKP2P42843 MDS3YGL197W 4464 nt1.62□□□□□ -2.15
SKP2P42843 RPL33BYOR234C 324 nt1.62□□□□□ -2.15
SKP2P42843 IFH1YLR223C 3258 nt1.62□□□□□ -2.15
SKP2P42843 COG4YPR105C 2586 nt1.62□□□□□ -2.15
SKP2P42843 YLL019W-AYLL019W-A 93 nt1.61□□□□□ -2.15
SKP2P42843 YBR174CYBR174C 315 nt1.61□□□□□ -2.15
SKP2P42843 COY1YKL179C 2040 nt1.61□□□□□ -2.15
SKP2P42843 YOR072W-BYOR072W-B 162 nt1.6□□□□□ -2.15
SKP2P42843 AHC1YOR023C 1701 nt1.6□□□□□ -2.15
SKP2P42843 BST1YFL025C 3090 nt1.6□□□□□ -2.15
SKP2P42843 RAD50YNL250W 3939 nt1.59□□□□□ -2.15
SKP2P42843 YDL196WYDL196W 330 nt1.59□□□□□ -2.15
SKP2P42843 YBR206WYBR206W 324 nt1.59□□□□□ -2.15
SKP2P42843 YLL007CYLL007C 1998 nt1.59□□□□□ -2.16
SKP2P42843 PRP42YDR235W 1635 nt1.58□□□□□ -2.16
SKP2P42843 PTP2YOR208W 2253 nt1.58□□□□□ -2.16
SKP2P42843 SLX4YLR135W 2247 nt1.58□□□□□ -2.16
SKP2P42843 CCH1YGR217W 6120 nt1.58□□□□□ -2.16
SKP2P42843 snR14snR14 160 nt1.57□□□□□ -2.16
SKP2P42843 SMC4YLR086W 4257 nt1.57□□□□□ -2.16
SKP2P42843 NCA2YPR155C 1851 nt1.56□□□□□ -2.16
SKP2P42843 NUP157YER105C 4176 nt1.56□□□□□ -2.16
SKP2P42843 YEL073CYEL073C 324 nt1.55□□□□□ -2.16
SKP2P42843 PAN2YGL094C 3348 nt1.55□□□□□ -2.16
SKP2P42843 PKH2YOL100W 3246 nt1.55□□□□□ -2.16
SKP2P42843 LAA1YJL207C 6045 nt1.54□□□□□ -2.16
SKP2P42843 YOR161W-BYOR161W-B 261 nt1.54□□□□□ -2.16
SKP2P42843 FIG4YNL325C 2640 nt1.54□□□□□ -2.16
SKP2P42843 IRA1YBR140C 9279 nt1.53□□□□□ -2.16
SKP2P42843 SLD3YGL113W 2007 nt1.52□□□□□ -2.17
SKP2P42843 YIL134C-AYIL134C-A 204 nt1.52□□□□□ -2.17
SKP2P42843 tH(GUG)E1tH(GUG)E1 72 nt1.51□□□□□ -2.17
SKP2P42843 tH(GUG)E2tH(GUG)E2 72 nt1.51□□□□□ -2.17
SKP2P42843 tH(GUG)G1tH(GUG)G1 72 nt1.51□□□□□ -2.17
SKP2P42843 tH(GUG)G2tH(GUG)G2 72 nt1.51□□□□□ -2.17
SKP2P42843 tH(GUG)HtH(GUG)H 72 nt1.51□□□□□ -2.17
SKP2P42843 tH(GUG)KtH(GUG)K 72 nt1.51□□□□□ -2.17
SKP2P42843 tH(GUG)MtH(GUG)M 72 nt1.51□□□□□ -2.17
SKP2P42843 YOR329W-AYOR329W-A 210 nt1.51□□□□□ -2.17
SKP2P42843 YDL206WYDL206W 2289 nt1.51□□□□□ -2.17
SKP2P42843 AIM44YPL158C 2277 nt1.51□□□□□ -2.17
SKP2P42843 PIK1YNL267W 3201 nt1.51□□□□□ -2.17
SKP2P42843 SPC110YDR356W 2835 nt1.5□□□□□ -2.17
SKP2P42843 YDR354C-AYDR354C-A 144 nt1.5□□□□□ -2.17
SKP2P42843 IML1YJR138W 4755 nt1.5□□□□□ -2.17
SKP2P42843 SWI4YER111C 3282 nt1.49□□□□□ -2.17
SKP2P42843 POL5YEL055C 3069 nt1.49□□□□□ -2.17
SKP2P42843 PAU12YGR294W 363 nt1.49□□□□□ -2.17
SKP2P42843 PAU24YBR301W 363 nt1.49□□□□□ -2.17
SKP2P42843 PBY1YBR094W 2262 nt1.49□□□□□ -2.17
SKP2P42843 TTI1YKL033W 3117 nt1.49□□□□□ -2.17
SKP2P42843 APL3YBL037W 3078 nt1.48□□□□□ -2.17
SKP2P42843 MMS4YBR098W 2076 nt1.48□□□□□ -2.17
SKP2P42843 RPS30BYOR182C 192 nt1.48□□□□□ -2.17
SKP2P42843 EST2YLR318W 2655 nt1.48□□□□□ -2.17
SKP2P42843 SEC21YNL287W 2808 nt1.48□□□□□ -2.17
SKP2P42843 YLL054CYLL054C 2532 nt1.47□□□□□ -2.17
SKP2P42843 SET3YKR029C 2256 nt1.46□□□□□ -2.18
SKP2P42843 YCR038W-AYCR038W-A 126 nt1.46□□□□□ -2.18
SKP2P42843 YHL015W-AYHL015W-A 84 nt1.46□□□□□ -2.18
SKP2P42843 YPL044CYPL044C 549 nt1.46□□□□□ -2.18
SKP2P42843 YCL001W-BYCL001W-B 255 nt1.46□□□□□ -2.18
SKP2P42843 CDC39YCR093W 6327 nt1.46□□□□□ -2.18
SKP2P42843 MSN5YDR335W 3675 nt1.46□□□□□ -2.18
SKP2P42843 CLU1YMR012W 3834 nt1.46□□□□□ -2.18
SKP2P42843 YAR009CYAR009C 3591 nt1.45□□□□□ -2.18
SKP2P42843 NUP188YML103C 4968 nt1.45□□□□□ -2.18
SKP2P42843 YER053C-AYER053C-A 114 nt1.45□□□□□ -2.18
SKP2P42843 YBL109WYBL109W 336 nt1.44□□□□□ -2.18
SKP2P42843 HAL9YOL089C 3093 nt1.44□□□□□ -2.18
SKP2P42843 YJL026C-AYJL026C-A 222 nt1.43□□□□□ -2.18
SKP2P42843 YOR102WYOR102W 351 nt1.43□□□□□ -2.18
SKP2P42843 YBR221W-AYBR221W-A 105 nt1.42□□□□□ -2.18
SKP2P42843 CDC25YLR310C 4770 nt1.42□□□□□ -2.18
SKP2P42843 AZF1YOR113W 2745 nt1.42□□□□□ -2.18
SKP2P42843 MYO1YHR023W 5787 nt1.41□□□□□ -2.18
SKP2P42843 STO1YMR125W 2586 nt1.41□□□□□ -2.18
SKP2P42843 PAA1YDR071C 576 nt1.41□□□□□ -2.18
SKP2P42843 tQ(UUG)E2tQ(UUG)E2 72 nt1.41□□□□□ -2.18
SKP2P42843 COX12YLR038C 252 nt1.41□□□□□ -2.18
SKP2P42843 RSM22YKL155C 1887 nt1.4□□□□□ -2.19
SKP2P42843 SNU13YEL026W 381 nt1.4□□□□□ -2.19
SKP2P42843 tL(UAA)QtL(UAA)Q 85 nt1.4□□□□□ -2.19
SKP2P42843 YIL071W-AYIL071W-A 477 nt1.4□□□□□ -2.19
SKP2P42843 HKR1YDR420W 5409 nt1.4□□□□□ -2.19
SKP2P42843 SEC3YER008C 4011 nt1.39□□□□□ -2.19
SKP2P42843 NUP145YGL092W 3954 nt1.39□□□□□ -2.19
SKP2P42843 FYV8YGR196C 2454 nt1.38□□□□□ -2.19
SKP2P42843 YFR012W-AYFR012W-A 87 nt1.38□□□□□ -2.19
SKP2P42843 tV(UAC)BtV(UAC)B 74 nt1.38□□□□□ -2.19
SKP2P42843 tV(UAC)DtV(UAC)D 74 nt1.38□□□□□ -2.19
SKP2P42843 STB6YKL072W 2301 nt1.38□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 210.8 ms