Protein–RNA interactions for Protein: P40453

UBP7, Ubiquitin carboxyl-terminal hydrolase 7, yeastyeast

Predictions only

Length 1,071 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP7P40453 YIL020C-AYIL020C-A 339 nt1.58□□□□□ -2.16
UBP7P40453 MSN5YDR335W 3675 nt1.58□□□□□ -2.16
UBP7P40453 SLX4YLR135W 2247 nt1.58□□□□□ -2.16
UBP7P40453 YLL054CYLL054C 2532 nt1.58□□□□□ -2.16
UBP7P40453 SMC1YFL008W 3678 nt1.58□□□□□ -2.16
UBP7P40453 YLL019W-AYLL019W-A 93 nt1.57□□□□□ -2.16
UBP7P40453 YBR131C-AYBR131C-A 90 nt1.57□□□□□ -2.16
UBP7P40453 AHC1YOR023C 1701 nt1.57□□□□□ -2.16
UBP7P40453 YNL284C-BYNL284C-B 5268 nt1.56□□□□□ -2.16
UBP7P40453 snR85snR85 171 nt1.56□□□□□ -2.16
UBP7P40453 YLR140WYLR140W 327 nt1.56□□□□□ -2.16
UBP7P40453 SXM1YDR395W 2835 nt1.56□□□□□ -2.16
UBP7P40453 SDH6YDR379C-A 240 nt1.55□□□□□ -2.16
UBP7P40453 YDR521WYDR521W 336 nt1.55□□□□□ -2.16
UBP7P40453 YLR342W-AYLR342W-A 174 nt1.55□□□□□ -2.16
UBP7P40453 snR14snR14 160 nt1.55□□□□□ -2.16
UBP7P40453 CLU1YMR012W 3834 nt1.55□□□□□ -2.16
UBP7P40453 EST2YLR318W 2655 nt1.54□□□□□ -2.16
UBP7P40453 CHS1YNL192W 3396 nt1.54□□□□□ -2.16
UBP7P40453 snR52snR52 92 nt1.54□□□□□ -2.16
UBP7P40453 CAT8YMR280C 4302 nt1.54□□□□□ -2.16
UBP7P40453 HUG1YML058W-A 207 nt1.53□□□□□ -2.16
UBP7P40453 FIG4YNL325C 2640 nt1.53□□□□□ -2.16
UBP7P40453 MDS3YGL197W 4464 nt1.53□□□□□ -2.16
UBP7P40453 IFH1YLR223C 3258 nt1.53□□□□□ -2.17
UBP7P40453 YNL097C-BYNL097C-B 123 nt1.52□□□□□ -2.17
UBP7P40453 SSK2YNR031C 4740 nt1.52□□□□□ -2.17
UBP7P40453 MMS4YBR098W 2076 nt1.52□□□□□ -2.17
UBP7P40453 MEC1YBR136W 7107 nt1.52□□□□□ -2.17
UBP7P40453 NUP157YER105C 4176 nt1.51□□□□□ -2.17
UBP7P40453 YDL206WYDL206W 2289 nt1.51□□□□□ -2.17
UBP7P40453 YDL196WYDL196W 330 nt1.51□□□□□ -2.17
UBP7P40453 STF2YGR008C 255 nt1.51□□□□□ -2.17
UBP7P40453 YOR161W-BYOR161W-B 261 nt1.51□□□□□ -2.17
UBP7P40453 YBR206WYBR206W 324 nt1.51□□□□□ -2.17
UBP7P40453 CCH1YGR217W 6120 nt1.5□□□□□ -2.17
UBP7P40453 YOR345CYOR345C 351 nt1.5□□□□□ -2.17
UBP7P40453 HKR1YDR420W 5409 nt1.49□□□□□ -2.17
UBP7P40453 tQ(UUG)E2tQ(UUG)E2 72 nt1.49□□□□□ -2.17
UBP7P40453 IRA1YBR140C 9279 nt1.49□□□□□ -2.17
UBP7P40453 YBL109WYBL109W 336 nt1.47□□□□□ -2.17
UBP7P40453 PET127YOR017W 2403 nt1.47□□□□□ -2.17
UBP7P40453 YGR164WYGR164W 336 nt1.46□□□□□ -2.18
UBP7P40453 ALY2YJL084C 3141 nt1.46□□□□□ -2.18
UBP7P40453 SWI4YER111C 3282 nt1.45□□□□□ -2.18
UBP7P40453 APL1YJR005W 2103 nt1.45□□□□□ -2.18
UBP7P40453 YDR354C-AYDR354C-A 144 nt1.45□□□□□ -2.18
UBP7P40453 YOR329W-AYOR329W-A 210 nt1.45□□□□□ -2.18
UBP7P40453 BUD3YCL014W 4911 nt1.45□□□□□ -2.18
UBP7P40453 MSH3YCR092C 3057 nt1.45□□□□□ -2.18
UBP7P40453 YEL073CYEL073C 324 nt1.44□□□□□ -2.18
UBP7P40453 RPL33BYOR234C 324 nt1.44□□□□□ -2.18
UBP7P40453 NUP188YML103C 4968 nt1.44□□□□□ -2.18
UBP7P40453 snR46snR46 197 nt1.43□□□□□ -2.18
UBP7P40453 ROM2YLR371W 4071 nt1.43□□□□□ -2.18
UBP7P40453 AZF1YOR113W 2745 nt1.42□□□□□ -2.18
UBP7P40453 PMP1YCR024C-A 123 nt1.42□□□□□ -2.18
UBP7P40453 YNL211CYNL211C 261 nt1.42□□□□□ -2.18
UBP7P40453 RSM22YKL155C 1887 nt1.41□□□□□ -2.18
UBP7P40453 FYV8YGR196C 2454 nt1.41□□□□□ -2.18
UBP7P40453 tH(GUG)E1tH(GUG)E1 72 nt1.41□□□□□ -2.18
UBP7P40453 tH(GUG)E2tH(GUG)E2 72 nt1.41□□□□□ -2.18
UBP7P40453 tH(GUG)G1tH(GUG)G1 72 nt1.41□□□□□ -2.18
UBP7P40453 tH(GUG)G2tH(GUG)G2 72 nt1.41□□□□□ -2.18
UBP7P40453 tH(GUG)HtH(GUG)H 72 nt1.41□□□□□ -2.18
UBP7P40453 tH(GUG)KtH(GUG)K 72 nt1.41□□□□□ -2.18
UBP7P40453 tH(GUG)MtH(GUG)M 72 nt1.41□□□□□ -2.18
UBP7P40453 APL3YBL037W 3078 nt1.41□□□□□ -2.18
UBP7P40453 SET3YKR029C 2256 nt1.4□□□□□ -2.19
UBP7P40453 PAN2YGL094C 3348 nt1.4□□□□□ -2.19
UBP7P40453 YAR009CYAR009C 3591 nt1.4□□□□□ -2.19
UBP7P40453 YGR130CYGR130C 2451 nt1.39□□□□□ -2.19
UBP7P40453 PAA1YDR071C 576 nt1.39□□□□□ -2.19
UBP7P40453 YBR221W-AYBR221W-A 105 nt1.39□□□□□ -2.19
UBP7P40453 CDC25YLR310C 4770 nt1.39□□□□□ -2.19
UBP7P40453 STO1YMR125W 2586 nt1.39□□□□□ -2.19
UBP7P40453 EAF1YDR359C 2949 nt1.38□□□□□ -2.19
UBP7P40453 SEC21YNL287W 2808 nt1.38□□□□□ -2.19
UBP7P40453 RPS30BYOR182C 192 nt1.38□□□□□ -2.19
UBP7P40453 TTI1YKL033W 3117 nt1.37□□□□□ -2.19
UBP7P40453 YDR524C-AYDR524C-A 120 nt1.37□□□□□ -2.19
UBP7P40453 YIL071W-AYIL071W-A 477 nt1.37□□□□□ -2.19
UBP7P40453 YOR381W-AYOR381W-A 168 nt1.37□□□□□ -2.19
UBP7P40453 YBR178WYBR178W 375 nt1.37□□□□□ -2.19
UBP7P40453 COY1YKL179C 2040 nt1.37□□□□□ -2.19
UBP7P40453 WAR1YML076C 2835 nt1.36□□□□□ -2.19
UBP7P40453 YJL026C-AYJL026C-A 222 nt1.36□□□□□ -2.19
UBP7P40453 YLL020CYLL020C 306 nt1.36□□□□□ -2.19
UBP7P40453 NUP145YGL092W 3954 nt1.35□□□□□ -2.19
UBP7P40453 PIK1YNL267W 3201 nt1.35□□□□□ -2.19
UBP7P40453 YCR038W-AYCR038W-A 126 nt1.35□□□□□ -2.19
UBP7P40453 YAL067W-AYAL067W-A 228 nt1.35□□□□□ -2.19
UBP7P40453 NST1YNL091W 3723 nt1.35□□□□□ -2.19
UBP7P40453 LAA1YJL207C 6045 nt1.35□□□□□ -2.19
UBP7P40453 SEC3YER008C 4011 nt1.34□□□□□ -2.19
UBP7P40453 PRP42YDR235W 1635 nt1.33□□□□□ -2.2
UBP7P40453 YKL100W-AYKL100W-A 90 nt1.33□□□□□ -2.2
UBP7P40453 COX12YLR038C 252 nt1.33□□□□□ -2.2
UBP7P40453 YBR200W-AYBR200W-A 165 nt1.33□□□□□ -2.2
UBP7P40453 GEA2YEL022W 4380 nt1.33□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms