Protein–RNA interactions for Protein: P0CX43

RPL1A, 60S ribosomal protein L1-A, yeastyeast

Known RBP Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL1AP0CX43 TAR1YLR154W-C 375 nt0.77□□□□□ -2.29
RPL1AP0CX43 BUD3YCL014W 4911 nt0.77□□□□□ -2.29
RPL1AP0CX43 RKR1YMR247C 4689 nt0.76□□□□□ -2.29
RPL1AP0CX43 RPL26BYGR034W 384 nt0.75□□□□□ -2.29
RPL1AP0CX43 YMR321CYMR321C 318 nt0.75□□□□□ -2.29
RPL1AP0CX43 YPL225WYPL225W 441 nt0.75□□□□□ -2.29
RPL1AP0CX43 SEC1YDR164C 2175 nt0.74□□□□□ -2.29
RPL1AP0CX43 YPR016W-AYPR016W-A 261 nt0.74□□□□□ -2.29
RPL1AP0CX43 NPR2YEL062W 1848 nt0.73□□□□□ -2.29
RPL1AP0CX43 YNL211CYNL211C 261 nt0.73□□□□□ -2.29
RPL1AP0CX43 YPR159C-AYPR159C-A 102 nt0.73□□□□□ -2.29
RPL1AP0CX43 SSS1YDR086C 243 nt0.71□□□□□ -2.3
RPL1AP0CX43 SGF11YPL047W 300 nt0.71□□□□□ -2.3
RPL1AP0CX43 NHP2YDL208W 471 nt0.7□□□□□ -2.3
RPL1AP0CX43 tT(AGU)BtT(AGU)B 73 nt0.7□□□□□ -2.3
RPL1AP0CX43 tT(AGU)CtT(AGU)C 73 nt0.7□□□□□ -2.3
RPL1AP0CX43 tT(AGU)DtT(AGU)D 73 nt0.7□□□□□ -2.3
RPL1AP0CX43 tT(AGU)HtT(AGU)H 73 nt0.7□□□□□ -2.3
RPL1AP0CX43 tT(AGU)I1tT(AGU)I1 73 nt0.7□□□□□ -2.3
RPL1AP0CX43 tT(AGU)I2tT(AGU)I2 73 nt0.7□□□□□ -2.3
RPL1AP0CX43 tT(AGU)JtT(AGU)J 73 nt0.7□□□□□ -2.3
RPL1AP0CX43 tT(AGU)N1tT(AGU)N1 73 nt0.7□□□□□ -2.3
RPL1AP0CX43 tT(AGU)N2tT(AGU)N2 73 nt0.7□□□□□ -2.3
RPL1AP0CX43 tT(AGU)O1tT(AGU)O1 73 nt0.7□□□□□ -2.3
RPL1AP0CX43 tT(AGU)O2tT(AGU)O2 73 nt0.7□□□□□ -2.3
RPL1AP0CX43 YOR218CYOR218C 420 nt0.7□□□□□ -2.3
RPL1AP0CX43 YPL038W-AYPL038W-A 192 nt0.7□□□□□ -2.3
RPL1AP0CX43 PRP16YKR086W 3216 nt0.7□□□□□ -2.3
RPL1AP0CX43 YPR197CYPR197C 564 nt0.69□□□□□ -2.3
RPL1AP0CX43 CHS6YJL099W 2241 nt0.69□□□□□ -2.3
RPL1AP0CX43 LTE1YAL024C 4308 nt0.68□□□□□ -2.3
RPL1AP0CX43 YHL046W-AYHL046W-A 327 nt0.68□□□□□ -2.3
RPL1AP0CX43 SEC8YPR055W 3198 nt0.67□□□□□ -2.3
RPL1AP0CX43 YFR012W-AYFR012W-A 87 nt0.66□□□□□ -2.3
RPL1AP0CX43 RPS27BYHR021C 249 nt0.66□□□□□ -2.3
RPL1AP0CX43 YIL115W-AYIL115W-A 372 nt0.66□□□□□ -2.3
RPL1AP0CX43 YAF9YNL107W 681 nt0.66□□□□□ -2.3
RPL1AP0CX43 TRS65YGR166W 1683 nt0.65□□□□□ -2.3
RPL1AP0CX43 CSE2YNR010W 450 nt0.65□□□□□ -2.31
RPL1AP0CX43 COG8YML071C 1824 nt0.65□□□□□ -2.31
RPL1AP0CX43 ASE1YOR058C 2658 nt0.65□□□□□ -2.31
RPL1AP0CX43 YML002WYML002W 2214 nt0.64□□□□□ -2.31
RPL1AP0CX43 HTL1YCR020W-B 237 nt0.63□□□□□ -2.31
RPL1AP0CX43 YDR102CYDR102C 333 nt0.63□□□□□ -2.31
RPL1AP0CX43 YLR399W-AYLR399W-A 105 nt0.63□□□□□ -2.31
RPL1AP0CX43 YMR031W-AYMR031W-A 327 nt0.63□□□□□ -2.31
RPL1AP0CX43 YMR272W-AYMR272W-A 114 nt0.62□□□□□ -2.31
RPL1AP0CX43 YPR160W-AYPR160W-A 81 nt0.62□□□□□ -2.31
RPL1AP0CX43 YCR018C-AYCR018C-A 255 nt0.61□□□□□ -2.31
RPL1AP0CX43 YAL067W-AYAL067W-A 228 nt0.61□□□□□ -2.31
RPL1AP0CX43 FYV10YIL097W 1551 nt0.61□□□□□ -2.31
RPL1AP0CX43 BIR1YJR089W 2865 nt0.6□□□□□ -2.31
RPL1AP0CX43 VIK1YPL253C 1944 nt0.6□□□□□ -2.31
RPL1AP0CX43 snR60snR60 104 nt0.6□□□□□ -2.31
RPL1AP0CX43 YIL032CYIL032C 357 nt0.59□□□□□ -2.31
RPL1AP0CX43 YIL134C-AYIL134C-A 204 nt0.59□□□□□ -2.31
RPL1AP0CX43 YDL240C-AYDL240C-A 138 nt0.58□□□□□ -2.32
RPL1AP0CX43 COX5BYIL111W 456 nt0.58□□□□□ -2.32
RPL1AP0CX43 YMR307C-AYMR307C-A 195 nt0.58□□□□□ -2.32
RPL1AP0CX43 snR190snR190 190 nt0.58□□□□□ -2.32
RPL1AP0CX43 UTP10YJL109C 5310 nt0.58□□□□□ -2.32
RPL1AP0CX43 ULP2YIL031W 3105 nt0.58□□□□□ -2.32
RPL1AP0CX43 YDL185C-AYDL185C-A 228 nt0.57□□□□□ -2.32
RPL1AP0CX43 YJL127W-AYJL127W-A 117 nt0.57□□□□□ -2.32
RPL1AP0CX43 snR36snR36 182 nt0.57□□□□□ -2.32
RPL1AP0CX43 YDR183C-AYDR183C-A 258 nt0.56□□□□□ -2.32
RPL1AP0CX43 HAL9YOL089C 3093 nt0.56□□□□□ -2.32
RPL1AP0CX43 UTP8YGR128C 2142 nt0.56□□□□□ -2.32
RPL1AP0CX43 BEM3YPL115C 3387 nt0.55□□□□□ -2.32
RPL1AP0CX43 YDR354C-AYDR354C-A 144 nt0.55□□□□□ -2.32
RPL1AP0CX43 YGL149WYGL149W 306 nt0.55□□□□□ -2.32
RPL1AP0CX43 PRP5YBR237W 2550 nt0.55□□□□□ -2.32
RPL1AP0CX43 AI1Q0050 2505 nt0.55□□□□□ -2.32
RPL1AP0CX43 FMP27YLR454W 7887 nt0.54□□□□□ -2.32
RPL1AP0CX43 OST4YDL232W 111 nt0.53□□□□□ -2.32
RPL1AP0CX43 YJL026C-AYJL026C-A 222 nt0.53□□□□□ -2.32
RPL1AP0CX43 YKL136WYKL136W 399 nt0.53□□□□□ -2.32
RPL1AP0CX43 YMR193C-AYMR193C-A 387 nt0.53□□□□□ -2.32
RPL1AP0CX43 PET111YMR257C 2403 nt0.53□□□□□ -2.33
RPL1AP0CX43 PRP42YDR235W 1635 nt0.52□□□□□ -2.33
RPL1AP0CX43 MLP1YKR095W 5628 nt0.51□□□□□ -2.33
RPL1AP0CX43 ATP6Q0085 780 nt0.51□□□□□ -2.33
RPL1AP0CX43 YNL028WYNL028W 318 nt0.5□□□□□ -2.33
RPL1AP0CX43 YEL020C-BYEL020C-B 198 nt0.49□□□□□ -2.33
RPL1AP0CX43 YFL063WYFL063W 456 nt0.49□□□□□ -2.33
RPL1AP0CX43 YJL197C-AYJL197C-A 282 nt0.49□□□□□ -2.33
RPL1AP0CX43 GIM4YEL003W 336 nt0.48□□□□□ -2.33
RPL1AP0CX43 YLR282CYLR282C 342 nt0.48□□□□□ -2.33
RPL1AP0CX43 YFL032WYFL032W 321 nt0.47□□□□□ -2.33
RPL1AP0CX43 YHR175W-AYHR175W-A 150 nt0.47□□□□□ -2.33
RPL1AP0CX43 SBH1YER087C-B 249 nt0.46□□□□□ -2.34
RPL1AP0CX43 RPL39YJL189W 156 nt0.46□□□□□ -2.34
RPL1AP0CX43 HMRA1YCR097W 381 nt0.45□□□□□ -2.34
RPL1AP0CX43 COY1YKL179C 2040 nt0.45□□□□□ -2.34
RPL1AP0CX43 BUL2YML111W 2763 nt0.45□□□□□ -2.34
RPL1AP0CX43 snR56snR56 88 nt0.44□□□□□ -2.34
RPL1AP0CX43 BLI1YKL061W 342 nt0.44□□□□□ -2.34
RPL1AP0CX43 YKL100W-AYKL100W-A 90 nt0.44□□□□□ -2.34
RPL1AP0CX43 YKL118WYKL118W 312 nt0.44□□□□□ -2.34
RPL1AP0CX43 YDR413CYDR413C 576 nt0.43□□□□□ -2.34
Retrieved 100 of 7,029 protein–RNA pairs in 18.8 ms