Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.06■□□□□ 0.8
LDB2O43679 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.06■□□□□ 0.8
LDB2O43679 AC091874.3-201ENST00000512672 1195 ntBASIC20.06■□□□□ 0.8
LDB2O43679 AL138781.1-201ENST00000566567 1274 ntBASIC20.06■□□□□ 0.8
LDB2O43679 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LDB2O43679 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.06■□□□□ 0.8
LDB2O43679 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.06■□□□□ 0.8
LDB2O43679 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
LDB2O43679 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LDB2O43679 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LDB2O43679 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LDB2O43679 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
LDB2O43679 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.05■□□□□ 0.8
LDB2O43679 AFG3L1P-217ENST00000557444 2447 ntBASIC20.05■□□□□ 0.8
LDB2O43679 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
LDB2O43679 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.05■□□□□ 0.8
LDB2O43679 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LDB2O43679 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LDB2O43679 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.05■□□□□ 0.8
LDB2O43679 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.05■□□□□ 0.8
LDB2O43679 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LDB2O43679 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.05■□□□□ 0.8
LDB2O43679 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.05■□□□□ 0.8
LDB2O43679 MIR4758-201ENST00000577688 71 ntBASIC20.05■□□□□ 0.8
LDB2O43679 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.05■□□□□ 0.8
LDB2O43679 AC104771.1-201ENST00000603335 964 ntBASIC20.05■□□□□ 0.8
LDB2O43679 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
LDB2O43679 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.05■□□□□ 0.8
LDB2O43679 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LDB2O43679 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.05■□□□□ 0.8
LDB2O43679 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.05■□□□□ 0.8
LDB2O43679 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.05■□□□□ 0.8
LDB2O43679 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LDB2O43679 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LDB2O43679 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LDB2O43679 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LDB2O43679 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
LDB2O43679 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LDB2O43679 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LDB2O43679 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LDB2O43679 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LDB2O43679 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LDB2O43679 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
LDB2O43679 AC098934.4-201ENST00000564127 592 ntBASIC20.04■□□□□ 0.8
LDB2O43679 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.04■□□□□ 0.8
LDB2O43679 MYC-209ENST00000641252 345 ntBASIC20.04■□□□□ 0.8
LDB2O43679 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
LDB2O43679 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LDB2O43679 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LDB2O43679 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
LDB2O43679 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LDB2O43679 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LDB2O43679 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LDB2O43679 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LDB2O43679 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LDB2O43679 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LDB2O43679 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LDB2O43679 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
LDB2O43679 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LDB2O43679 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
LDB2O43679 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
LDB2O43679 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.03■□□□□ 0.8
LDB2O43679 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.03■□□□□ 0.8
LDB2O43679 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.03■□□□□ 0.8
LDB2O43679 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LDB2O43679 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
LDB2O43679 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LDB2O43679 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.03■□□□□ 0.8
LDB2O43679 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.03■□□□□ 0.8
LDB2O43679 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LDB2O43679 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.03■□□□□ 0.8
LDB2O43679 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LDB2O43679 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LDB2O43679 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.02■□□□□ 0.8
LDB2O43679 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LDB2O43679 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LDB2O43679 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
LDB2O43679 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
LDB2O43679 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.02■□□□□ 0.8
LDB2O43679 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LDB2O43679 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LDB2O43679 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
LDB2O43679 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.02■□□□□ 0.79
LDB2O43679 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
LDB2O43679 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
LDB2O43679 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LDB2O43679 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LDB2O43679 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LDB2O43679 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.01■□□□□ 0.79
LDB2O43679 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LDB2O43679 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LDB2O43679 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LDB2O43679 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.01■□□□□ 0.79
LDB2O43679 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LDB2O43679 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.01■□□□□ 0.79
LDB2O43679 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
LDB2O43679 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.01■□□□□ 0.79
LDB2O43679 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.01■□□□□ 0.79
LDB2O43679 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LDB2O43679 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms