Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 SGM1YJR134C 2124 nt2.54□□□□□ -2
UFD2P54860 YBR221W-AYBR221W-A 105 nt2.54□□□□□ -2
UFD2P54860 IFH1YLR223C 3258 nt2.53□□□□□ -2
UFD2P54860 HMI1YOL095C 2121 nt2.53□□□□□ -2
UFD2P54860 CTR9YOL145C 3234 nt2.53□□□□□ -2
UFD2P54860 YDR521WYDR521W 336 nt2.53□□□□□ -2
UFD2P54860 YLR035C-AYLR035C-A 3468 nt2.53□□□□□ -2
UFD2P54860 UTP22YGR090W 3714 nt2.53□□□□□ -2.01
UFD2P54860 PSD2YGR170W 3417 nt2.52□□□□□ -2.01
UFD2P54860 PET309YLR067C 2898 nt2.52□□□□□ -2.01
UFD2P54860 ALK1YGL021W 2283 nt2.52□□□□□ -2.01
UFD2P54860 BUD2YKL092C 3315 nt2.52□□□□□ -2.01
UFD2P54860 TIM9YEL020W-A 264 nt2.51□□□□□ -2.01
UFD2P54860 CSF1YLR087C 8877 nt2.51□□□□□ -2.01
UFD2P54860 YIL134C-AYIL134C-A 204 nt2.5□□□□□ -2.01
UFD2P54860 YPL044CYPL044C 549 nt2.5□□□□□ -2.01
UFD2P54860 SAP185YJL098W 3177 nt2.49□□□□□ -2.01
UFD2P54860 YCR087C-AYCR087C-A 462 nt2.49□□□□□ -2.01
UFD2P54860 YBR206WYBR206W 324 nt2.49□□□□□ -2.01
UFD2P54860 TOR1YJR066W 7413 nt2.49□□□□□ -2.01
UFD2P54860 SBE22YHR103W 2559 nt2.48□□□□□ -2.01
UFD2P54860 YDR354C-AYDR354C-A 144 nt2.48□□□□□ -2.01
UFD2P54860 DNF1YER166W 4716 nt2.48□□□□□ -2.01
UFD2P54860 RTT101YJL047C 2529 nt2.48□□□□□ -2.01
UFD2P54860 PBY1YBR094W 2262 nt2.47□□□□□ -2.01
UFD2P54860 YMR175W-AYMR175W-A 195 nt2.47□□□□□ -2.01
UFD2P54860 YOR102WYOR102W 351 nt2.47□□□□□ -2.01
UFD2P54860 IRE1YHR079C 3348 nt2.47□□□□□ -2.01
UFD2P54860 YJL052C-AYJL052C-A 120 nt2.46□□□□□ -2.02
UFD2P54860 YPR097WYPR097W 3222 nt2.46□□□□□ -2.02
UFD2P54860 SSD1YDR293C 3753 nt2.46□□□□□ -2.02
UFD2P54860 HIR3YJR140C 4947 nt2.46□□□□□ -2.02
UFD2P54860 INO80YGL150C 4470 nt2.45□□□□□ -2.02
UFD2P54860 PKH2YOL100W 3246 nt2.45□□□□□ -2.02
UFD2P54860 RPS30BYOR182C 192 nt2.45□□□□□ -2.02
UFD2P54860 YNL144CYNL144C 2223 nt2.45□□□□□ -2.02
UFD2P54860 YHL015W-AYHL015W-A 84 nt2.44□□□□□ -2.02
UFD2P54860 YGR109W-BYGR109W-B 4644 nt2.44□□□□□ -2.02
UFD2P54860 COG4YPR105C 2586 nt2.44□□□□□ -2.02
UFD2P54860 COX12YLR038C 252 nt2.43□□□□□ -2.02
UFD2P54860 YBR178WYBR178W 375 nt2.43□□□□□ -2.02
UFD2P54860 SLI15YBR156C 2097 nt2.43□□□□□ -2.02
UFD2P54860 YJL026C-AYJL026C-A 222 nt2.42□□□□□ -2.02
UFD2P54860 YOR329W-AYOR329W-A 210 nt2.42□□□□□ -2.02
UFD2P54860 REV3YPL167C 4515 nt2.41□□□□□ -2.02
UFD2P54860 FRK1YPL141C 2598 nt2.41□□□□□ -2.02
UFD2P54860 YJL022WYJL022W 309 nt2.41□□□□□ -2.02
UFD2P54860 YOR314W-AYOR314W-A 111 nt2.41□□□□□ -2.02
UFD2P54860 IST2YBR086C 2841 nt2.41□□□□□ -2.02
UFD2P54860 HSL1YKL101W 4557 nt2.4□□□□□ -2.02
UFD2P54860 YCR038W-AYCR038W-A 126 nt2.4□□□□□ -2.03
UFD2P54860 PAA1YDR071C 576 nt2.4□□□□□ -2.03
UFD2P54860 YKL165C-AYKL165C-A 234 nt2.4□□□□□ -2.03
UFD2P54860 UFD4YKL010C 4452 nt2.4□□□□□ -2.03
UFD2P54860 CTF4YPR135W 2784 nt2.39□□□□□ -2.03
UFD2P54860 YDL118WYDL118W 381 nt2.39□□□□□ -2.03
UFD2P54860 YCL001W-BYCL001W-B 255 nt2.39□□□□□ -2.03
UFD2P54860 KOG1YHR186C 4674 nt2.38□□□□□ -2.03
UFD2P54860 BRE1YDL074C 2103 nt2.38□□□□□ -2.03
UFD2P54860 YDR524C-AYDR524C-A 120 nt2.38□□□□□ -2.03
UFD2P54860 SEC16YPL085W 6588 nt2.37□□□□□ -2.03
UFD2P54860 TDA9YML081W 3756 nt2.37□□□□□ -2.03
UFD2P54860 GYP5YPL249C 2685 nt2.36□□□□□ -2.03
UFD2P54860 IRC8YJL051W 2469 nt2.36□□□□□ -2.03
UFD2P54860 SEY1YOR165W 2331 nt2.36□□□□□ -2.03
UFD2P54860 TOF1YNL273W 3717 nt2.35□□□□□ -2.03
UFD2P54860 YOL098CYOL098C 3114 nt2.35□□□□□ -2.03
UFD2P54860 DGR1YNL130C-A 147 nt2.35□□□□□ -2.03
UFD2P54860 STH1YIL126W 4080 nt2.35□□□□□ -2.03
UFD2P54860 TTI1YKL033W 3117 nt2.35□□□□□ -2.03
UFD2P54860 SFB2YNL049C 2631 nt2.35□□□□□ -2.03
UFD2P54860 MDS3YGL197W 4464 nt2.34□□□□□ -2.03
UFD2P54860 ADR1YDR216W 3972 nt2.34□□□□□ -2.03
UFD2P54860 YER053C-AYER053C-A 114 nt2.34□□□□□ -2.03
UFD2P54860 APL1YJR005W 2103 nt2.33□□□□□ -2.04
UFD2P54860 SEC63YOR254C 1992 nt2.33□□□□□ -2.04
UFD2P54860 BNI1YNL271C 5862 nt2.33□□□□□ -2.04
UFD2P54860 YFR012W-AYFR012W-A 87 nt2.32□□□□□ -2.04
UFD2P54860 YIL002W-AYIL002W-A 210 nt2.32□□□□□ -2.04
UFD2P54860 SPO24YPR036W-A 204 nt2.32□□□□□ -2.04
UFD2P54860 CDC31YOR257W 486 nt2.31□□□□□ -2.04
UFD2P54860 HER1YOR227W 3741 nt2.31□□□□□ -2.04
UFD2P54860 UBP15YMR304W 3693 nt2.3□□□□□ -2.04
UFD2P54860 SIR4YDR227W 4077 nt2.3□□□□□ -2.04
UFD2P54860 TRM3YDL112W 4311 nt2.3□□□□□ -2.04
UFD2P54860 UTP21YLR409C 2820 nt2.3□□□□□ -2.04
UFD2P54860 SPP41YDR464W 4308 nt2.29□□□□□ -2.04
UFD2P54860 YDL206WYDL206W 2289 nt2.29□□□□□ -2.04
UFD2P54860 YER172C-AYER172C-A 381 nt2.29□□□□□ -2.04
UFD2P54860 YBL109WYBL109W 336 nt2.29□□□□□ -2.04
UFD2P54860 NUT1YGL151W 3399 nt2.29□□□□□ -2.04
UFD2P54860 PRP5YBR237W 2550 nt2.28□□□□□ -2.04
UFD2P54860 tL(UAA)QtL(UAA)Q 85 nt2.28□□□□□ -2.04
UFD2P54860 USO1YDL058W 5373 nt2.28□□□□□ -2.04
UFD2P54860 YHR180W-AYHR180W-A 183 nt2.27□□□□□ -2.05
UFD2P54860 YNL211CYNL211C 261 nt2.27□□□□□ -2.05
UFD2P54860 MSH6YDR097C 3729 nt2.27□□□□□ -2.05
UFD2P54860 YAL067W-AYAL067W-A 228 nt2.26□□□□□ -2.05
UFD2P54860 UBR2YLR024C 5619 nt2.25□□□□□ -2.05
UFD2P54860 POL5YEL055C 3069 nt2.25□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 28.3 ms