Protein–RNA interactions for Protein: P47085

YJR008W, MEMO1 family protein YJR008W, yeastyeast

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YJR008WP47085 CDC36YDL165W 576 nt1.55□□□□□ -2.16
YJR008WP47085 YDR426CYDR426C 378 nt1.55□□□□□ -2.16
YJR008WP47085 snR14snR14 160 nt1.55□□□□□ -2.16
YJR008WP47085 PKH2YOL100W 3246 nt1.55□□□□□ -2.16
YJR008WP47085 NUP188YML103C 4968 nt1.55□□□□□ -2.16
YJR008WP47085 RAD9YDR217C 3930 nt1.54□□□□□ -2.16
YJR008WP47085 MAM33YIL070C 801 nt1.54□□□□□ -2.16
YJR008WP47085 YLR334CYLR334C 381 nt1.54□□□□□ -2.16
YJR008WP47085 EAF1YDR359C 2949 nt1.54□□□□□ -2.16
YJR008WP47085 snR56snR56 88 nt1.53□□□□□ -2.16
YJR008WP47085 FIG4YNL325C 2640 nt1.52□□□□□ -2.17
YJR008WP47085 YLL007CYLL007C 1998 nt1.51□□□□□ -2.17
YJR008WP47085 ATP6Q0085 780 nt1.51□□□□□ -2.17
YJR008WP47085 YHL042WYHL042W 453 nt1.51□□□□□ -2.17
YJR008WP47085 YBR221W-AYBR221W-A 105 nt1.51□□□□□ -2.17
YJR008WP47085 STB6YKL072W 2301 nt1.5□□□□□ -2.17
YJR008WP47085 HTB2YBL002W 396 nt1.5□□□□□ -2.17
YJR008WP47085 YDL206WYDL206W 2289 nt1.5□□□□□ -2.17
YJR008WP47085 STO1YMR125W 2586 nt1.5□□□□□ -2.17
YJR008WP47085 OST1YJL002C 1431 nt1.49□□□□□ -2.17
YJR008WP47085 PET127YOR017W 2403 nt1.49□□□□□ -2.17
YJR008WP47085 HMRA2YCR096C 360 nt1.49□□□□□ -2.17
YJR008WP47085 YHR175W-AYHR175W-A 150 nt1.48□□□□□ -2.17
YJR008WP47085 PBY1YBR094W 2262 nt1.47□□□□□ -2.17
YJR008WP47085 SIP4YJL089W 2490 nt1.47□□□□□ -2.17
YJR008WP47085 YHR007C-AYHR007C-A 216 nt1.47□□□□□ -2.17
YJR008WP47085 RPL34BYIL052C 366 nt1.46□□□□□ -2.18
YJR008WP47085 GIM4YEL003W 336 nt1.45□□□□□ -2.18
YJR008WP47085 UBP3YER151C 2739 nt1.44□□□□□ -2.18
YJR008WP47085 YDR169C-AYDR169C-A 150 nt1.44□□□□□ -2.18
YJR008WP47085 CSN9YDR179C 489 nt1.44□□□□□ -2.18
YJR008WP47085 YJR011CYJR011C 786 nt1.44□□□□□ -2.18
YJR008WP47085 YDR521WYDR521W 336 nt1.43□□□□□ -2.18
YJR008WP47085 KAP120YPL125W 3099 nt1.43□□□□□ -2.18
YJR008WP47085 SLD3YGL113W 2007 nt1.42□□□□□ -2.18
YJR008WP47085 tR(ACG)Q2tR(ACG)Q2 74 nt1.42□□□□□ -2.18
YJR008WP47085 tV(UAC)BtV(UAC)B 74 nt1.42□□□□□ -2.18
YJR008WP47085 tV(UAC)DtV(UAC)D 74 nt1.42□□□□□ -2.18
YJR008WP47085 TAR1YLR154W-C 375 nt1.42□□□□□ -2.18
YJR008WP47085 YPR197CYPR197C 564 nt1.42□□□□□ -2.18
YJR008WP47085 WAR1YML076C 2835 nt1.42□□□□□ -2.18
YJR008WP47085 RPL33BYOR234C 324 nt1.41□□□□□ -2.18
YJR008WP47085 YPL038W-AYPL038W-A 192 nt1.41□□□□□ -2.18
YJR008WP47085 RPL35AYDL191W 363 nt1.39□□□□□ -2.19
YJR008WP47085 ISD11YER048W-A 285 nt1.39□□□□□ -2.19
YJR008WP47085 YPR016W-AYPR016W-A 261 nt1.39□□□□□ -2.19
YJR008WP47085 AHC1YOR023C 1701 nt1.39□□□□□ -2.19
YJR008WP47085 CDC39YCR093W 6327 nt1.38□□□□□ -2.19
YJR008WP47085 YCK3YER123W 1575 nt1.38□□□□□ -2.19
YJR008WP47085 tW(UCA)QtW(UCA)Q 74 nt1.37□□□□□ -2.19
YJR008WP47085 LTE1YAL024C 4308 nt1.36□□□□□ -2.19
YJR008WP47085 YAR029WYAR029W 225 nt1.36□□□□□ -2.19
YJR008WP47085 SPT7YBR081C 3999 nt1.36□□□□□ -2.19
YJR008WP47085 SCC2YDR180W 4482 nt1.35□□□□□ -2.19
YJR008WP47085 YMR321CYMR321C 318 nt1.34□□□□□ -2.19
YJR008WP47085 YOR282WYOR282W 321 nt1.34□□□□□ -2.19
YJR008WP47085 YBL008W-AYBL008W-A 240 nt1.33□□□□□ -2.2
YJR008WP47085 YDL240C-AYDL240C-A 138 nt1.32□□□□□ -2.2
YJR008WP47085 YNL284C-BYNL284C-B 5268 nt1.31□□□□□ -2.2
YJR008WP47085 APL1YJR005W 2103 nt1.3□□□□□ -2.2
YJR008WP47085 YDR524W-CYDR524W-C 90 nt1.3□□□□□ -2.2
YJR008WP47085 YBR206WYBR206W 324 nt1.3□□□□□ -2.2
YJR008WP47085 SMC1YFL008W 3678 nt1.3□□□□□ -2.2
YJR008WP47085 YDR183C-AYDR183C-A 258 nt1.29□□□□□ -2.2
YJR008WP47085 BEM2YER155C 6504 nt1.29□□□□□ -2.2
YJR008WP47085 PAA1YDR071C 576 nt1.28□□□□□ -2.2
YJR008WP47085 YDR102CYDR102C 333 nt1.28□□□□□ -2.2
YJR008WP47085 Q0142Q0142 177 nt1.28□□□□□ -2.2
YJR008WP47085 RPS25BYLR333C 327 nt1.28□□□□□ -2.2
YJR008WP47085 PRP16YKR086W 3216 nt1.28□□□□□ -2.21
YJR008WP47085 SPO21YOL091W 1830 nt1.27□□□□□ -2.21
YJR008WP47085 HTL1YCR020W-B 237 nt1.27□□□□□ -2.21
YJR008WP47085 PAU12YGR294W 363 nt1.27□□□□□ -2.21
YJR008WP47085 YJL120WYJL120W 324 nt1.27□□□□□ -2.21
YJR008WP47085 PAU24YBR301W 363 nt1.27□□□□□ -2.21
YJR008WP47085 YSP1YHR155W 3687 nt1.27□□□□□ -2.21
YJR008WP47085 DOP1YDR141C 5097 nt1.26□□□□□ -2.21
YJR008WP47085 YDR048CYDR048C 315 nt1.25□□□□□ -2.21
YJR008WP47085 DBP6YNR038W 1890 nt1.24□□□□□ -2.21
YJR008WP47085 YDL196WYDL196W 330 nt1.23□□□□□ -2.21
YJR008WP47085 YAF9YNL107W 681 nt1.23□□□□□ -2.21
YJR008WP47085 RPS30BYOR182C 192 nt1.23□□□□□ -2.21
YJR008WP47085 YPL044CYPL044C 549 nt1.23□□□□□ -2.21
YJR008WP47085 YBR064WYBR064W 429 nt1.23□□□□□ -2.21
YJR008WP47085 SSS1YDR086C 243 nt1.22□□□□□ -2.21
YJR008WP47085 YOR011W-AYOR011W-A 207 nt1.22□□□□□ -2.21
YJR008WP47085 NOP9YJL010C 2001 nt1.22□□□□□ -2.21
YJR008WP47085 ALG13YGL047W 609 nt1.21□□□□□ -2.22
YJR008WP47085 OLI1Q0130 231 nt1.21□□□□□ -2.22
YJR008WP47085 YIL142C-AYIL142C-A 333 nt1.2□□□□□ -2.22
YJR008WP47085 YKL136WYKL136W 399 nt1.2□□□□□ -2.22
YJR008WP47085 BUD3YCL014W 4911 nt1.2□□□□□ -2.22
YJR008WP47085 YDL073WYDL073W 2955 nt1.19□□□□□ -2.22
YJR008WP47085 RPL39YJL189W 156 nt1.19□□□□□ -2.22
YJR008WP47085 CMC4YMR194C-B 222 nt1.18□□□□□ -2.22
YJR008WP47085 PMP1YCR024C-A 123 nt1.17□□□□□ -2.22
YJR008WP47085 YKL118WYKL118W 312 nt1.17□□□□□ -2.22
YJR008WP47085 CSE2YNR010W 450 nt1.17□□□□□ -2.22
YJR008WP47085 YPL225WYPL225W 441 nt1.17□□□□□ -2.22
YJR008WP47085 UTP20YBL004W 7482 nt1.16□□□□□ -2.22
Retrieved 100 of 7,029 protein–RNA pairs in 62.1 ms