Protein–RNA interactions for Protein: P38358

VBA2, Vacuolar basic amino acid transporter 2, yeastyeast

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VBA2P38358 CUL3YGR003W 2235 nt1.68□□□□□ -2.14
VBA2P38358 YLL007CYLL007C 1998 nt1.67□□□□□ -2.14
VBA2P38358 MCM10YIL150C 1716 nt1.67□□□□□ -2.14
VBA2P38358 VPS55YJR044C 423 nt1.67□□□□□ -2.14
VBA2P38358 YBR174CYBR174C 315 nt1.67□□□□□ -2.14
VBA2P38358 YBR182C-AYBR182C-A 195 nt1.67□□□□□ -2.14
VBA2P38358 TDA9YML081W 3756 nt1.67□□□□□ -2.14
VBA2P38358 YOR225WYOR225W 330 nt1.66□□□□□ -2.14
VBA2P38358 SPO24YPR036W-A 204 nt1.66□□□□□ -2.14
VBA2P38358 PTP2YOR208W 2253 nt1.66□□□□□ -2.14
VBA2P38358 YOR093CYOR093C 4947 nt1.66□□□□□ -2.14
VBA2P38358 SLI15YBR156C 2097 nt1.65□□□□□ -2.14
VBA2P38358 LHS1YKL073W 2646 nt1.65□□□□□ -2.15
VBA2P38358 YIR030W-AYIR030W-A 384 nt1.65□□□□□ -2.15
VBA2P38358 YNL198CYNL198C 303 nt1.65□□□□□ -2.15
VBA2P38358 COG4YPR105C 2586 nt1.65□□□□□ -2.15
VBA2P38358 YKU70YMR284W 1809 nt1.64□□□□□ -2.15
VBA2P38358 PAU3YCR104W 375 nt1.64□□□□□ -2.15
VBA2P38358 ALK1YGL021W 2283 nt1.64□□□□□ -2.15
VBA2P38358 PKH2YOL100W 3246 nt1.63□□□□□ -2.15
VBA2P38358 DNF3YMR162C 4971 nt1.63□□□□□ -2.15
VBA2P38358 RTP1YMR185W 2946 nt1.63□□□□□ -2.15
VBA2P38358 YDL185C-AYDL185C-A 228 nt1.63□□□□□ -2.15
VBA2P38358 OLI1Q0130 231 nt1.63□□□□□ -2.15
VBA2P38358 YOR376WYOR376W 369 nt1.63□□□□□ -2.15
VBA2P38358 YDR521WYDR521W 336 nt1.62□□□□□ -2.15
VBA2P38358 YMR272W-BYMR272W-B 108 nt1.62□□□□□ -2.15
VBA2P38358 MON2YNL297C 4911 nt1.62□□□□□ -2.15
VBA2P38358 RAD50YNL250W 3939 nt1.62□□□□□ -2.15
VBA2P38358 EMC5YIL027C 426 nt1.61□□□□□ -2.15
VBA2P38358 YMR247W-AYMR247W-A 144 nt1.61□□□□□ -2.15
VBA2P38358 YOR072W-BYOR072W-B 162 nt1.61□□□□□ -2.15
VBA2P38358 TBS1YBR150C 3285 nt1.61□□□□□ -2.15
VBA2P38358 PBY1YBR094W 2262 nt1.6□□□□□ -2.15
VBA2P38358 LRE1YCL051W 1752 nt1.6□□□□□ -2.15
VBA2P38358 ISD11YER048W-A 285 nt1.6□□□□□ -2.15
VBA2P38358 PKH3YDR466W 2697 nt1.59□□□□□ -2.15
VBA2P38358 NUT1YGL151W 3399 nt1.59□□□□□ -2.15
VBA2P38358 YEL014CYEL014C 306 nt1.59□□□□□ -2.15
VBA2P38358 YGL007C-AYGL007C-A 87 nt1.59□□□□□ -2.15
VBA2P38358 ECM12YHR021W-A 456 nt1.59□□□□□ -2.15
VBA2P38358 tT(UGU)HtT(UGU)H 72 nt1.59□□□□□ -2.15
VBA2P38358 YBR206WYBR206W 324 nt1.59□□□□□ -2.15
VBA2P38358 AHC1YOR023C 1701 nt1.59□□□□□ -2.16
VBA2P38358 SKI3YPR189W 4299 nt1.59□□□□□ -2.16
VBA2P38358 MEC1YBR136W 7107 nt1.59□□□□□ -2.16
VBA2P38358 Q0032Q0032 291 nt1.58□□□□□ -2.16
VBA2P38358 YGL217CYGL217C 342 nt1.58□□□□□ -2.16
VBA2P38358 COF1YLL050C 432 nt1.58□□□□□ -2.16
VBA2P38358 YBR131C-AYBR131C-A 90 nt1.58□□□□□ -2.16
VBA2P38358 YGR109W-BYGR109W-B 4644 nt1.58□□□□□ -2.16
VBA2P38358 SMC4YLR086W 4257 nt1.58□□□□□ -2.16
VBA2P38358 PIP2YOR363C 2991 nt1.58□□□□□ -2.16
VBA2P38358 IFH1YLR223C 3258 nt1.58□□□□□ -2.16
VBA2P38358 PEP1YBL017C 4740 nt1.57□□□□□ -2.16
VBA2P38358 YNL097C-BYNL097C-B 123 nt1.57□□□□□ -2.16
VBA2P38358 UFD2YDL190C 2886 nt1.57□□□□□ -2.16
VBA2P38358 YJL182CYJL182C 318 nt1.56□□□□□ -2.16
VBA2P38358 YLL019W-AYLL019W-A 93 nt1.56□□□□□ -2.16
VBA2P38358 ULI1YFR026C 510 nt1.55□□□□□ -2.16
VBA2P38358 YHR210CYHR210C 1026 nt1.55□□□□□ -2.16
VBA2P38358 YJL022WYJL022W 309 nt1.55□□□□□ -2.16
VBA2P38358 YLR466C-BYLR466C-B 117 nt1.55□□□□□ -2.16
VBA2P38358 SLX4YLR135W 2247 nt1.55□□□□□ -2.16
VBA2P38358 ADR1YDR216W 3972 nt1.55□□□□□ -2.16
VBA2P38358 VPS15YBR097W 4365 nt1.54□□□□□ -2.16
VBA2P38358 IRA1YBR140C 9279 nt1.54□□□□□ -2.16
VBA2P38358 YGR151CYGR151C 336 nt1.54□□□□□ -2.16
VBA2P38358 KCS1YDR017C 3153 nt1.54□□□□□ -2.16
VBA2P38358 MDS3YGL197W 4464 nt1.54□□□□□ -2.16
VBA2P38358 YDL206WYDL206W 2289 nt1.54□□□□□ -2.16
VBA2P38358 AIM44YPL158C 2277 nt1.54□□□□□ -2.16
VBA2P38358 CTF4YPR135W 2784 nt1.53□□□□□ -2.16
VBA2P38358 KIP1YBL063W 3336 nt1.53□□□□□ -2.16
VBA2P38358 SAC3YDR159W 3906 nt1.53□□□□□ -2.16
VBA2P38358 YDL196WYDL196W 330 nt1.53□□□□□ -2.16
VBA2P38358 CFT1YDR301W 4074 nt1.53□□□□□ -2.16
VBA2P38358 YJL150WYJL150W 303 nt1.53□□□□□ -2.16
VBA2P38358 snR14snR14 160 nt1.53□□□□□ -2.16
VBA2P38358 YLR035C-AYLR035C-A 3468 nt1.53□□□□□ -2.17
VBA2P38358 SLD3YGL113W 2007 nt1.52□□□□□ -2.17
VBA2P38358 YOR345CYOR345C 351 nt1.52□□□□□ -2.17
VBA2P38358 ALY2YJL084C 3141 nt1.5□□□□□ -2.17
VBA2P38358 FIG4YNL325C 2640 nt1.5□□□□□ -2.17
VBA2P38358 YDR354C-AYDR354C-A 144 nt1.5□□□□□ -2.17
VBA2P38358 YLR140WYLR140W 327 nt1.5□□□□□ -2.17
VBA2P38358 REV3YPL167C 4515 nt1.49□□□□□ -2.17
VBA2P38358 YLR294CYLR294C 330 nt1.49□□□□□ -2.17
VBA2P38358 YLL054CYLL054C 2532 nt1.49□□□□□ -2.17
VBA2P38358 NCA2YPR155C 1851 nt1.49□□□□□ -2.17
VBA2P38358 YOR019WYOR019W 2193 nt1.49□□□□□ -2.17
VBA2P38358 MMS4YBR098W 2076 nt1.49□□□□□ -2.17
VBA2P38358 PMD1YER132C 5262 nt1.49□□□□□ -2.17
VBA2P38358 SBE22YHR103W 2559 nt1.48□□□□□ -2.17
VBA2P38358 KAP122YGL016W 3246 nt1.47□□□□□ -2.17
VBA2P38358 TRM3YDL112W 4311 nt1.47□□□□□ -2.17
VBA2P38358 snR46snR46 197 nt1.47□□□□□ -2.17
VBA2P38358 snR52snR52 92 nt1.45□□□□□ -2.18
VBA2P38358 PAN2YGL094C 3348 nt1.45□□□□□ -2.18
VBA2P38358 YAR009CYAR009C 3591 nt1.44□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 22.9 ms