Protein–RNA interactions for Protein: P25339

PUF4, Pumilio homology domain family member 4, yeastyeast

Known RBP RIP-Chip data

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF4P25339 RTT107YHR154W 3213 nt2.43□□□□□ -2.02
PUF4P25339 UBR1YGR184C 5853 nt2.43□□□□□ -2.02
PUF4P25339 YLR035C-AYLR035C-A 3468 nt2.42□□□□□ -2.02
PUF4P25339 YDL247W-AYDL247W-A 75 nt2.42□□□□□ -2.02
PUF4P25339 TIM9YEL020W-A 264 nt2.42□□□□□ -2.02
PUF4P25339 YHR180W-AYHR180W-A 183 nt2.42□□□□□ -2.02
PUF4P25339 FIG4YNL325C 2640 nt2.42□□□□□ -2.02
PUF4P25339 TRA1YHR099W 11235 nt2.42□□□□□ -2.02 RIP-Chip
PUF4P25339 BUD2YKL092C 3315 nt2.42□□□□□ -2.02
PUF4P25339 MAD1YGL086W 2250 nt2.42□□□□□ -2.02
PUF4P25339 APL2YKL135C 2181 nt2.42□□□□□ -2.02
PUF4P25339 TDA9YML081W 3756 nt2.41□□□□□ -2.02
PUF4P25339 SYH1YPL105C 2550 nt2.41□□□□□ -2.02
PUF4P25339 RGA1YOR127W 3024 nt2.41□□□□□ -2.02
PUF4P25339 YHL015W-AYHL015W-A 84 nt2.41□□□□□ -2.02
PUF4P25339 SPF1YEL031W 3648 nt2.41□□□□□ -2.02
PUF4P25339 TOR1YJR066W 7413 nt2.41□□□□□ -2.02 RIP-Chip
PUF4P25339 DNF1YER166W 4716 nt2.4□□□□□ -2.02
PUF4P25339 CTR9YOL145C 3234 nt2.4□□□□□ -2.02
PUF4P25339 PMP2YEL017C-A 132 nt2.4□□□□□ -2.03
PUF4P25339 GIP3YPL137C 3831 nt2.4□□□□□ -2.03
PUF4P25339 CSF1YLR087C 8877 nt2.39□□□□□ -2.03
PUF4P25339 STH1YIL126W 4080 nt2.39□□□□□ -2.03
PUF4P25339 MSH5YDL154W 2706 nt2.39□□□□□ -2.03
PUF4P25339 YIL134C-AYIL134C-A 204 nt2.39□□□□□ -2.03
PUF4P25339 YKR075W-AYKR075W-A 270 nt2.39□□□□□ -2.03
PUF4P25339 YPL044CYPL044C 549 nt2.39□□□□□ -2.03 RIP-Chip
PUF4P25339 SCD5YOR329C 2619 nt2.39□□□□□ -2.03
PUF4P25339 MLH3YPL164C 2148 nt2.39□□□□□ -2.03
PUF4P25339 KIP1YBL063W 3336 nt2.38□□□□□ -2.03
PUF4P25339 AHC1YOR023C 1701 nt2.38□□□□□ -2.03
PUF4P25339 YPR097WYPR097W 3222 nt2.38□□□□□ -2.03 RIP-Chip
PUF4P25339 TFC3YAL001C 3483 nt2.38□□□□□ -2.03
PUF4P25339 FRK1YPL141C 2598 nt2.38□□□□□ -2.03
PUF4P25339 SCP160YJL080C 3669 nt2.38□□□□□ -2.03
PUF4P25339 HER1YOR227W 3741 nt2.37□□□□□ -2.03
PUF4P25339 PTP2YOR208W 2253 nt2.37□□□□□ -2.03
PUF4P25339 RPL37BYDR500C 267 nt2.37□□□□□ -2.03
PUF4P25339 RAV1YJR033C 4074 nt2.37□□□□□ -2.03
PUF4P25339 PDR11YIL013C 4236 nt2.37□□□□□ -2.03
PUF4P25339 PAA1YDR071C 576 nt2.36□□□□□ -2.03 RIP-Chip
PUF4P25339 YFR012W-AYFR012W-A 87 nt2.36□□□□□ -2.03
PUF4P25339 AIM44YPL158C 2277 nt2.36□□□□□ -2.03
PUF4P25339 IST2YBR086C 2841 nt2.36□□□□□ -2.03
PUF4P25339 CDC31YOR257W 486 nt2.35□□□□□ -2.03
PUF4P25339 DGR2YKL121W 2559 nt2.34□□□□□ -2.03
PUF4P25339 IFH1YLR223C 3258 nt2.34□□□□□ -2.03
PUF4P25339 IRC8YJL051W 2469 nt2.33□□□□□ -2.04
PUF4P25339 IRA2YOL081W 9240 nt2.33□□□□□ -2.04
PUF4P25339 YCR087C-AYCR087C-A 462 nt2.33□□□□□ -2.04
PUF4P25339 ANS1YHR126C 480 nt2.33□□□□□ -2.04
PUF4P25339 YBR099CYBR099C 384 nt2.33□□□□□ -2.04
PUF4P25339 YOL098CYOL098C 3114 nt2.33□□□□□ -2.04
PUF4P25339 PIP2YOR363C 2991 nt2.33□□□□□ -2.04
PUF4P25339 HSL1YKL101W 4557 nt2.32□□□□□ -2.04
PUF4P25339 AGC1YPR021C 2709 nt2.32□□□□□ -2.04
PUF4P25339 tL(UAA)QtL(UAA)Q 85 nt2.32□□□□□ -2.04
PUF4P25339 SEY1YOR165W 2331 nt2.31□□□□□ -2.04
PUF4P25339 SAP185YJL098W 3177 nt2.31□□□□□ -2.04
PUF4P25339 snR61snR61 90 nt2.31□□□□□ -2.04
PUF4P25339 YCR095W-AYCR095W-A 159 nt2.3□□□□□ -2.04
PUF4P25339 YDR521WYDR521W 336 nt2.3□□□□□ -2.04
PUF4P25339 UFD4YKL010C 4452 nt2.3□□□□□ -2.04 RIP-Chip
PUF4P25339 CTF4YPR135W 2784 nt2.29□□□□□ -2.04 RIP-Chip
PUF4P25339 BNI1YNL271C 5862 nt2.29□□□□□ -2.04
PUF4P25339 SAP190YKR028W 3102 nt2.28□□□□□ -2.04 RIP-Chip
PUF4P25339 SBH1YER087C-B 249 nt2.28□□□□□ -2.04
PUF4P25339 SLD3YGL113W 2007 nt2.27□□□□□ -2.05
PUF4P25339 YNL067W-BYNL067W-B 141 nt2.27□□□□□ -2.05
PUF4P25339 DGR1YNL130C-A 147 nt2.27□□□□□ -2.05
PUF4P25339 RPS30BYOR182C 192 nt2.27□□□□□ -2.05
PUF4P25339 SEC63YOR254C 1992 nt2.27□□□□□ -2.05
PUF4P25339 PBY1YBR094W 2262 nt2.26□□□□□ -2.05
PUF4P25339 YDR354C-AYDR354C-A 144 nt2.26□□□□□ -2.05
PUF4P25339 YJL052C-AYJL052C-A 120 nt2.26□□□□□ -2.05
PUF4P25339 YBR206WYBR206W 324 nt2.26□□□□□ -2.05
PUF4P25339 ALK1YGL021W 2283 nt2.26□□□□□ -2.05
PUF4P25339 SEC16YPL085W 6588 nt2.26□□□□□ -2.05 RIP-Chip
PUF4P25339 CHC1YGL206C 4962 nt2.25□□□□□ -2.05
PUF4P25339 OST4YDL232W 111 nt2.25□□□□□ -2.05
PUF4P25339 COX12YLR038C 252 nt2.25□□□□□ -2.05
PUF4P25339 YNL211CYNL211C 261 nt2.25□□□□□ -2.05
PUF4P25339 YOR343W-BYOR343W-B 5313 nt2.24□□□□□ -2.05
PUF4P25339 YCR038W-AYCR038W-A 126 nt2.24□□□□□ -2.05
PUF4P25339 YDL118WYDL118W 381 nt2.24□□□□□ -2.05
PUF4P25339 YJL026C-AYJL026C-A 222 nt2.24□□□□□ -2.05
PUF4P25339 UTP22YGR090W 3714 nt2.24□□□□□ -2.05 RIP-Chip
PUF4P25339 YLR282CYLR282C 342 nt2.23□□□□□ -2.05
PUF4P25339 SBE22YHR103W 2559 nt2.23□□□□□ -2.05
PUF4P25339 MSH6YDR097C 3729 nt2.22□□□□□ -2.05
PUF4P25339 YGR109W-BYGR109W-B 4644 nt2.21□□□□□ -2.06
PUF4P25339 MYO4YAL029C 4416 nt2.21□□□□□ -2.06
PUF4P25339 SEC31YDL195W 3822 nt2.21□□□□□ -2.06
PUF4P25339 YMR175W-AYMR175W-A 195 nt2.21□□□□□ -2.06
PUF4P25339 TRM3YDL112W 4311 nt2.21□□□□□ -2.06 RIP-Chip
PUF4P25339 CMC4YMR194C-B 222 nt2.2□□□□□ -2.06
PUF4P25339 SLI15YBR156C 2097 nt2.2□□□□□ -2.06
PUF4P25339 PKH2YOL100W 3246 nt2.19□□□□□ -2.06
PUF4P25339 YNL144CYNL144C 2223 nt2.19□□□□□ -2.06
PUF4P25339 HIR3YJR140C 4947 nt2.19□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 15.1 ms