Protein–RNA interactions for Protein: P18480

SNF5, SWI/SNF chromatin-remodeling complex subunit SNF5, yeastyeast

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SNF5P18480 YER053C-AYER053C-A 114 nt2.26□□□□□ -2.05
SNF5P18480 ALK1YGL021W 2283 nt2.25□□□□□ -2.05
SNF5P18480 KRE33YNL132W 3171 nt2.25□□□□□ -2.05
SNF5P18480 AGC1YPR021C 2709 nt2.25□□□□□ -2.05
SNF5P18480 RPS30BYOR182C 192 nt2.25□□□□□ -2.05
SNF5P18480 MLH1YMR167W 2310 nt2.25□□□□□ -2.05
SNF5P18480 IRE1YHR079C 3348 nt2.25□□□□□ -2.05
SNF5P18480 ESL2YKR096W 3588 nt2.24□□□□□ -2.05
SNF5P18480 SYH1YPL105C 2550 nt2.24□□□□□ -2.05
SNF5P18480 CTR9YOL145C 3234 nt2.24□□□□□ -2.05
SNF5P18480 YCR038W-AYCR038W-A 126 nt2.24□□□□□ -2.05
SNF5P18480 TFB5YDR079C-A 219 nt2.24□□□□□ -2.05
SNF5P18480 YOR055WYOR055W 435 nt2.24□□□□□ -2.05
SNF5P18480 SGM1YJR134C 2124 nt2.24□□□□□ -2.05
SNF5P18480 CTF4YPR135W 2784 nt2.24□□□□□ -2.05
SNF5P18480 YDR354C-AYDR354C-A 144 nt2.23□□□□□ -2.05
SNF5P18480 YIL134C-AYIL134C-A 204 nt2.23□□□□□ -2.05
SNF5P18480 YKR075W-AYKR075W-A 270 nt2.23□□□□□ -2.05
SNF5P18480 YMR326CYMR326C 309 nt2.23□□□□□ -2.05
SNF5P18480 PKH2YOL100W 3246 nt2.23□□□□□ -2.05
SNF5P18480 YIL071W-AYIL071W-A 477 nt2.22□□□□□ -2.05
SNF5P18480 IRA2YOL081W 9240 nt2.22□□□□□ -2.05
SNF5P18480 ATG11YPR049C 3537 nt2.21□□□□□ -2.06
SNF5P18480 CSF1YLR087C 8877 nt2.21□□□□□ -2.06
SNF5P18480 MSB1YOR188W 3414 nt2.21□□□□□ -2.06
SNF5P18480 RPL37BYDR500C 267 nt2.21□□□□□ -2.06
SNF5P18480 YDR521WYDR521W 336 nt2.21□□□□□ -2.06
SNF5P18480 YDR544CYDR544C 429 nt2.21□□□□□ -2.06
SNF5P18480 YLR035C-AYLR035C-A 3468 nt2.21□□□□□ -2.06
SNF5P18480 ARP8YOR141C 2646 nt2.2□□□□□ -2.06
SNF5P18480 FRK1YPL141C 2598 nt2.2□□□□□ -2.06
SNF5P18480 SPF1YEL031W 3648 nt2.2□□□□□ -2.06
SNF5P18480 KOG1YHR186C 4674 nt2.19□□□□□ -2.06
SNF5P18480 IFH1YLR223C 3258 nt2.19□□□□□ -2.06
SNF5P18480 PMP2YEL017C-A 132 nt2.19□□□□□ -2.06
SNF5P18480 TIM9YEL020W-A 264 nt2.19□□□□□ -2.06
SNF5P18480 TUS1YLR425W 3924 nt2.19□□□□□ -2.06
SNF5P18480 COG4YPR105C 2586 nt2.18□□□□□ -2.06
SNF5P18480 PAA1YDR071C 576 nt2.18□□□□□ -2.06
SNF5P18480 COX12YLR038C 252 nt2.18□□□□□ -2.06
SNF5P18480 YMR175W-AYMR175W-A 195 nt2.18□□□□□ -2.06
SNF5P18480 YBR099CYBR099C 384 nt2.18□□□□□ -2.06
SNF5P18480 YBR206WYBR206W 324 nt2.18□□□□□ -2.06
SNF5P18480 SLI15YBR156C 2097 nt2.18□□□□□ -2.06
SNF5P18480 RTT107YHR154W 3213 nt2.17□□□□□ -2.06
SNF5P18480 YGR109W-BYGR109W-B 4644 nt2.16□□□□□ -2.06
SNF5P18480 YEF3YLR249W 3135 nt2.16□□□□□ -2.06
SNF5P18480 YOR019WYOR019W 2193 nt2.16□□□□□ -2.06
SNF5P18480 RTT101YJL047C 2529 nt2.16□□□□□ -2.06
SNF5P18480 PRP5YBR237W 2550 nt2.15□□□□□ -2.06
SNF5P18480 YCR087C-AYCR087C-A 462 nt2.15□□□□□ -2.07
SNF5P18480 YCR095W-AYCR095W-A 159 nt2.15□□□□□ -2.07
SNF5P18480 CMC4YMR194C-B 222 nt2.15□□□□□ -2.07
SNF5P18480 STH1YIL126W 4080 nt2.15□□□□□ -2.07
SNF5P18480 YNL144CYNL144C 2223 nt2.15□□□□□ -2.07
SNF5P18480 TTI1YKL033W 3117 nt2.15□□□□□ -2.07
SNF5P18480 YFR012W-AYFR012W-A 87 nt2.14□□□□□ -2.07
SNF5P18480 YJL026C-AYJL026C-A 222 nt2.14□□□□□ -2.07
SNF5P18480 YNL103W-AYNL103W-A 90 nt2.14□□□□□ -2.07
SNF5P18480 CDC31YOR257W 486 nt2.14□□□□□ -2.07
SNF5P18480 tL(UAA)QtL(UAA)Q 85 nt2.13□□□□□ -2.07
SNF5P18480 APL1YJR005W 2103 nt2.13□□□□□ -2.07
SNF5P18480 SCD5YOR329C 2619 nt2.11□□□□□ -2.07
SNF5P18480 YIL002W-AYIL002W-A 210 nt2.11□□□□□ -2.07
SNF5P18480 YNL211CYNL211C 261 nt2.11□□□□□ -2.07
SNF5P18480 YPR097WYPR097W 3222 nt2.1□□□□□ -2.07
SNF5P18480 UBP15YMR304W 3693 nt2.1□□□□□ -2.07
SNF5P18480 YDL118WYDL118W 381 nt2.1□□□□□ -2.07
SNF5P18480 ADR1YDR216W 3972 nt2.1□□□□□ -2.07
SNF5P18480 SVL3YPL032C 2478 nt2.1□□□□□ -2.07
SNF5P18480 BNI1YNL271C 5862 nt2.1□□□□□ -2.07
SNF5P18480 HIR3YJR140C 4947 nt2.09□□□□□ -2.07
SNF5P18480 MSH6YDR097C 3729 nt2.09□□□□□ -2.07
SNF5P18480 ANS1YHR126C 480 nt2.09□□□□□ -2.07
SNF5P18480 YHR217CYHR217C 462 nt2.09□□□□□ -2.07
SNF5P18480 TOF1YNL273W 3717 nt2.07□□□□□ -2.08
SNF5P18480 HSL1YKL101W 4557 nt2.07□□□□□ -2.08
SNF5P18480 YLL054CYLL054C 2532 nt2.07□□□□□ -2.08
SNF5P18480 SFB2YNL049C 2631 nt2.07□□□□□ -2.08
SNF5P18480 SEY1YOR165W 2331 nt2.07□□□□□ -2.08
SNF5P18480 HER1YOR227W 3741 nt2.07□□□□□ -2.08
SNF5P18480 SAP185YJL098W 3177 nt2.06□□□□□ -2.08
SNF5P18480 UTP22YGR090W 3714 nt2.06□□□□□ -2.08
SNF5P18480 CHS6YJL099W 2241 nt2.06□□□□□ -2.08
SNF5P18480 IST2YBR086C 2841 nt2.06□□□□□ -2.08
SNF5P18480 SIR4YDR227W 4077 nt2.06□□□□□ -2.08
SNF5P18480 OST4YDL232W 111 nt2.06□□□□□ -2.08
SNF5P18480 YDL247W-AYDL247W-A 75 nt2.06□□□□□ -2.08
SNF5P18480 MDS3YGL197W 4464 nt2.06□□□□□ -2.08
SNF5P18480 YDL206WYDL206W 2289 nt2.05□□□□□ -2.08
SNF5P18480 snR61snR61 90 nt2.05□□□□□ -2.08
SNF5P18480 UTP8YGR128C 2142 nt2.05□□□□□ -2.08
SNF5P18480 DNF1YER166W 4716 nt2.05□□□□□ -2.08
SNF5P18480 SOM1YEL059C-A 225 nt2.04□□□□□ -2.08
SNF5P18480 SPO24YPR036W-A 204 nt2.04□□□□□ -2.08
SNF5P18480 BPH1YCR032W 6504 nt2.04□□□□□ -2.08
SNF5P18480 USO1YDL058W 5373 nt2.04□□□□□ -2.08
SNF5P18480 UTP21YLR409C 2820 nt2.03□□□□□ -2.08
SNF5P18480 YHR180W-AYHR180W-A 183 nt2.03□□□□□ -2.08
SNF5P18480 YLR282CYLR282C 342 nt2.03□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 35.5 ms