Protein–RNA interactions for Protein: P11940

PABPC1, Polyadenylate-binding protein 1, humanhuman

Known RBP Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11940 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PABPC1P11940 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.55■□□□□ 0.88
PABPC1P11940 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PABPC1P11940 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PABPC1P11940 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PABPC1P11940 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.55■□□□□ 0.88
PABPC1P11940 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.55■□□□□ 0.88
PABPC1P11940 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
PABPC1P11940 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.55■□□□□ 0.88
PABPC1P11940 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PABPC1P11940 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.55■□□□□ 0.88
PABPC1P11940 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.55■□□□□ 0.88
PABPC1P11940 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PABPC1P11940 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
PABPC1P11940 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PABPC1P11940 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
PABPC1P11940 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PABPC1P11940 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PABPC1P11940 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.54■□□□□ 0.88
PABPC1P11940 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PABPC1P11940 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
PABPC1P11940 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PABPC1P11940 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
PABPC1P11940 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PABPC1P11940 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PABPC1P11940 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PABPC1P11940 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PABPC1P11940 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PABPC1P11940 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.54■□□□□ 0.88
PABPC1P11940 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PABPC1P11940 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.54■□□□□ 0.88
PABPC1P11940 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.54■□□□□ 0.88
PABPC1P11940 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.54■□□□□ 0.88
PABPC1P11940 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PABPC1P11940 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PABPC1P11940 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PABPC1P11940 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PABPC1P11940 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PABPC1P11940 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PABPC1P11940 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PABPC1P11940 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.53■□□□□ 0.88
PABPC1P11940 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.53■□□□□ 0.88
PABPC1P11940 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.53■□□□□ 0.88
PABPC1P11940 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PABPC1P11940 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PABPC1P11940 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.53■□□□□ 0.88
PABPC1P11940 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.53■□□□□ 0.88
PABPC1P11940 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PABPC1P11940 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.53■□□□□ 0.88
PABPC1P11940 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PABPC1P11940 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.53■□□□□ 0.88
PABPC1P11940 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PABPC1P11940 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PABPC1P11940 PTBP1P-201ENST00000554374 1601 ntBASIC20.53■□□□□ 0.88
PABPC1P11940 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PABPC1P11940 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.53■□□□□ 0.88
PABPC1P11940 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PABPC1P11940 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PABPC1P11940 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PABPC1P11940 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PABPC1P11940 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PABPC1P11940 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PABPC1P11940 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.52■□□□□ 0.88
PABPC1P11940 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PABPC1P11940 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PABPC1P11940 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PABPC1P11940 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.52■□□□□ 0.88
PABPC1P11940 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PABPC1P11940 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.52■□□□□ 0.88
PABPC1P11940 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.52■□□□□ 0.88
PABPC1P11940 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PABPC1P11940 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PABPC1P11940 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.52■□□□□ 0.88
PABPC1P11940 AL023875.1-201ENST00000640777 796 ntBASIC20.52■□□□□ 0.88
PABPC1P11940 AC007225.1-201ENST00000566331 1836 ntBASIC20.52■□□□□ 0.88
PABPC1P11940 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PABPC1P11940 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PABPC1P11940 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PABPC1P11940 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.52■□□□□ 0.87
PABPC1P11940 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.87
PABPC1P11940 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.87
PABPC1P11940 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PABPC1P11940 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
PABPC1P11940 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PABPC1P11940 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PABPC1P11940 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.51■□□□□ 0.87
PABPC1P11940 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PABPC1P11940 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.51■□□□□ 0.87
PABPC1P11940 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.51■□□□□ 0.87
PABPC1P11940 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
PABPC1P11940 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.51■□□□□ 0.87
PABPC1P11940 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.51■□□□□ 0.87
PABPC1P11940 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.51■□□□□ 0.87
PABPC1P11940 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.51■□□□□ 0.87
PABPC1P11940 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.51■□□□□ 0.87
PABPC1P11940 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PABPC1P11940 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PABPC1P11940 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.5■□□□□ 0.87
PABPC1P11940 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
PABPC1P11940 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms