Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SFTPBP07988 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SFTPBP07988 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SFTPBP07988 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SFTPBP07988 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
SFTPBP07988 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
SFTPBP07988 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SFTPBP07988 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SFTPBP07988 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SFTPBP07988 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SFTPBP07988 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.38■□□□□ 0.37
SFTPBP07988 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SFTPBP07988 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SFTPBP07988 CDCA4P2-201ENST00000441182 718 ntBASIC17.38■□□□□ 0.37
SFTPBP07988 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.38■□□□□ 0.37
SFTPBP07988 MFSD11-216ENST00000590393 1141 ntBASIC17.38■□□□□ 0.37
SFTPBP07988 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SFTPBP07988 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SFTPBP07988 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SFTPBP07988 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.38■□□□□ 0.37
SFTPBP07988 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SFTPBP07988 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.38■□□□□ 0.37
SFTPBP07988 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.38■□□□□ 0.37
SFTPBP07988 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.38■□□□□ 0.37
SFTPBP07988 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SFTPBP07988 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SFTPBP07988 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SFTPBP07988 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SFTPBP07988 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.37■□□□□ 0.37
SFTPBP07988 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
SFTPBP07988 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SFTPBP07988 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.37■□□□□ 0.37
SFTPBP07988 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.37■□□□□ 0.37
SFTPBP07988 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SFTPBP07988 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SFTPBP07988 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.37■□□□□ 0.37
SFTPBP07988 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.37■□□□□ 0.37
SFTPBP07988 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.37■□□□□ 0.37
SFTPBP07988 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.37■□□□□ 0.37
SFTPBP07988 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.37■□□□□ 0.37
SFTPBP07988 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.37■□□□□ 0.37
SFTPBP07988 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SFTPBP07988 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SFTPBP07988 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SFTPBP07988 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.37■□□□□ 0.37
SFTPBP07988 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SFTPBP07988 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SFTPBP07988 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.37■□□□□ 0.37
SFTPBP07988 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SFTPBP07988 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SFTPBP07988 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.36■□□□□ 0.37
SFTPBP07988 AC092720.2-201ENST00000602388 1665 ntBASIC17.36■□□□□ 0.37
SFTPBP07988 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SFTPBP07988 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SFTPBP07988 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SFTPBP07988 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SFTPBP07988 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.36■□□□□ 0.37
SFTPBP07988 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.36■□□□□ 0.37
SFTPBP07988 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.36■□□□□ 0.37
SFTPBP07988 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.36■□□□□ 0.37
SFTPBP07988 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SFTPBP07988 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
SFTPBP07988 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.36■□□□□ 0.37
SFTPBP07988 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.36■□□□□ 0.37
SFTPBP07988 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.36■□□□□ 0.37
SFTPBP07988 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SFTPBP07988 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.36■□□□□ 0.37
SFTPBP07988 RAP2CP1-201ENST00000605103 478 ntBASIC17.36■□□□□ 0.37
SFTPBP07988 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SFTPBP07988 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SFTPBP07988 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.36■□□□□ 0.37
SFTPBP07988 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SFTPBP07988 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SFTPBP07988 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SFTPBP07988 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.36■□□□□ 0.37
SFTPBP07988 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SFTPBP07988 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SFTPBP07988 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
SFTPBP07988 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SFTPBP07988 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SFTPBP07988 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SFTPBP07988 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.35■□□□□ 0.37
SFTPBP07988 AC091799.1-201ENST00000422823 811 ntBASIC17.35■□□□□ 0.37
SFTPBP07988 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SFTPBP07988 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.35■□□□□ 0.37
SFTPBP07988 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.35■□□□□ 0.37
SFTPBP07988 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.35■□□□□ 0.37
SFTPBP07988 MYCNOS-205ENST00000641950 531 ntBASIC17.35■□□□□ 0.37
SFTPBP07988 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SFTPBP07988 RBM17P2-201ENST00000616397 1405 ntBASIC17.35■□□□□ 0.37
SFTPBP07988 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SFTPBP07988 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.35■□□□□ 0.37
SFTPBP07988 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SFTPBP07988 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
SFTPBP07988 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
SFTPBP07988 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SFTPBP07988 AC099778.1-201ENST00000568593 1911 ntBASIC17.35■□□□□ 0.37
SFTPBP07988 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SFTPBP07988 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SFTPBP07988 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms